Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038785
CDS Infomation

pacid=37438531 polypeptide=PGSC0003DMP400026357 locus=PGSC0003DMG400014989 ID=PGSC0003DMT400038785.v4.03 annot-version=v4.03
Sequence

ATGTCTCTGAGGCCAAGTGATAGGACCGAGGTTCGTAGGAACCGATACAAGGTTGCCGTC
GATGCCGACGAAGGCCGCCGCCGGCGAGAGGACAATCTGGTTGAGATCCGTAAGAGTAAA
CGAGAAGAGAGTTTGCTCAAGAAGCGTCGTGAAGGCCTTCAAGCCCAACAACAACAGTTC
CCTGCTAATCTTCAAACTTCCACCGTTGAAAAGAAGTTGGAAAGTCTTCCATCAATGGTT
GCTGGTGTTTGGTCAAATGATAACAATATGCAGCTGGAGGCGACCACACAATTTCGTAAA
TTGCTCTCTATTGAAAGAAGTCCTCCTATTGAGGAAGTTATTCAATCTGGTGTTGTTCCT
CGTTTTGTTGAGTTTCTAATGAGGGAAGATTTTCCGCAACTCCAGTTTGAAGCTGCTTGG
GCGCTCACAAACATTGCGTCTGGTACCTCGGAGAATACCAGAGTGGTGATTGACCATGGC
GCTGTGCCAATTTTTGTAAAGCTTCTGGCTTCTCCAAGTGATGATGTTCGTGAGCAGGCT
GTGTGGGCACTGGGAAATGTTGCTGGTGACTCTCCTAGGTGCCGTGATCTTGTTCTTAGT
AATGGGGCGTTGATTCCATTGCTGTCTCAGCTGAATGAGCATGCCAAGCTTTCAATGCTG
AGAAATGCCACATGGACCTTGTCAAACTTTTGTAGAGGCAAGCCACAACCTCCATTTGAG
CAGGTGAGACCAGCACTTTCAGCTCTTCAGCGGCTTGTTCATTCAAATGATGAAGAGGTT
CTAACAGATGCATGCTGGGCACTTTCTTACCTTTCTGATGGTACGAATGACAAAATTCAA
GCTGTCATTGAAGCGGGTGTTTGTCCACGGCTGGTTGAGCTCCTCATGCATCCGTCTCCT
TCAGTACTCATCCCTGCCCTCCGTACAGTAGGAAATATTGTTACAGGAGATGACCTCCAG
ACTCAGTGCATTATTGAACATGGCGCCCTTGCTTGCCTGCTAAGCTTGTTATCTCACAGT
CACAAAAAGAGCATCAAGAAAGAGGCCTGTTGGACTATATCAAATATTACTGCCGGGAAC
AAGGAACAGATACAGGCTGTGGTCGAGGCTGGACTAATTAGTCCTCTGGTCAATTTGCTT
CAAACTGCTGAGTTTGATATAAAAAAAGAGGCTGCCTGGGCTATTTCAAATGCTACTTCC
GGTGGGAGTCATGAGCAGATCAAGTTTTTGGTGAGTCAAAACTGCATAAAGCCTCTGTGT
GATTTGCTTGTGTGCCCTGACCCAAGGATTGTCACCGTCTGTCTAGAAGGATTAGAAAAC
ATATTGAAGGTTGGGGAAGCAGAAAAAGCCAACACTGAAGGCATTAATTACTATGCTCAG
CTGATTGATGATGCTGAGGGATTGGAAAAGATTGAAAACCTTCAGAGTCATGATAACAAT
GAAATATATGAGAAGGCTGTTAAAATACTGGAGACATACTGGTTGGAGGAGGAGGATGAA
ACAGTGCCAGCTGGTGATGGAGCACAAAATGAGTTCAATTTTGGCGGAAATGATATTCAA
CTTCCATCTGGTGGTTTCAAGTTTGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026357
PEP Infomation

pacid=37438531 transcript=PGSC0003DMT400038785 locus=PGSC0003DMG400014989 ID=PGSC0003DMT400038785.v4.03 annot-version=v4.03
Sequence

MSLRPSDRTEVRRNRYKVAVDADEGRRRREDNLVEIRKSKREESLLKKRREGLQAQQQQF
PANLQTSTVEKKLESLPSMVAGVWSNDNNMQLEATTQFRKLLSIERSPPIEEVIQSGVVP
RFVEFLMREDFPQLQFEAAWALTNIASGTSENTRVVIDHGAVPIFVKLLASPSDDVREQA
VWALGNVAGDSPRCRDLVLSNGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQPPFE
QVRPALSALQRLVHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLMHPSP
SVLIPALRTVGNIVTGDDLQTQCIIEHGALACLLSLLSHSHKKSIKKEACWTISNITAGN
KEQIQAVVEAGLISPLVNLLQTAEFDIKKEAAWAISNATSGGSHEQIKFLVSQNCIKPLC
DLLVCPDPRIVTVCLEGLENILKVGEAEKANTEGINYYAQLIDDAEGLEKIENLQSHDNN
EIYEKAVKILETYWLEEEDETVPAGDGAQNEFNFGGNDIQLPSGGFKFG*

Transcript Sequence

Transcript ID

PGSC0003DMT400038785
Transcript Infomation

pacid=37438531 locus=PGSC0003DMG400014989 ID=PGSC0003DMT400038785.v4.03 annot-version=v4.03
Sequence

ATGTCTCTGAGGCCAAGTGATAGGACCGAGGTTCGTAGGAACCGATACAAGGTTGCCGTC
GATGCCGACGAAGGCCGCCGCCGGCGAGAGGACAATCTGGTTGAGATCCGTAAGAGTAAA
CGAGAAGAGAGTTTGCTCAAGAAGCGTCGTGAAGGCCTTCAAGCCCAACAACAACAGTTC
CCTGCTAATCTTCAAACTTCCACCGTTGAAAAGAAGTTGGAAAGTCTTCCATCAATGGTT
GCTGGTGTTTGGTCAAATGATAACAATATGCAGCTGGAGGCGACCACACAATTTCGTAAA
TTGCTCTCTATTGAAAGAAGTCCTCCTATTGAGGAAGTTATTCAATCTGGTGTTGTTCCT
CGTTTTGTTGAGTTTCTAATGAGGGAAGATTTTCCGCAACTCCAGTTTGAAGCTGCTTGG
GCGCTCACAAACATTGCGTCTGGTACCTCGGAGAATACCAGAGTGGTGATTGACCATGGC
GCTGTGCCAATTTTTGTAAAGCTTCTGGCTTCTCCAAGTGATGATGTTCGTGAGCAGGCT
GTGTGGGCACTGGGAAATGTTGCTGGTGACTCTCCTAGGTGCCGTGATCTTGTTCTTAGT
AATGGGGCGTTGATTCCATTGCTGTCTCAGCTGAATGAGCATGCCAAGCTTTCAATGCTG
AGAAATGCCACATGGACCTTGTCAAACTTTTGTAGAGGCAAGCCACAACCTCCATTTGAG
CAGGTGAGACCAGCACTTTCAGCTCTTCAGCGGCTTGTTCATTCAAATGATGAAGAGGTT
CTAACAGATGCATGCTGGGCACTTTCTTACCTTTCTGATGGTACGAATGACAAAATTCAA
GCTGTCATTGAAGCGGGTGTTTGTCCACGGCTGGTTGAGCTCCTCATGCATCCGTCTCCT
TCAGTACTCATCCCTGCCCTCCGTACAGTAGGAAATATTGTTACAGGAGATGACCTCCAG
ACTCAGTGCATTATTGAACATGGCGCCCTTGCTTGCCTGCTAAGCTTGTTATCTCACAGT
CACAAAAAGAGCATCAAGAAAGAGGCCTGTTGGACTATATCAAATATTACTGCCGGGAAC
AAGGAACAGATACAGGCTGTGGTCGAGGCTGGACTAATTAGTCCTCTGGTCAATTTGCTT
CAAACTGCTGAGTTTGATATAAAAAAAGAGGCTGCCTGGGCTATTTCAAATGCTACTTCC
GGTGGGAGTCATGAGCAGATCAAGTTTTTGGTGAGTCAAAACTGCATAAAGCCTCTGTGT
GATTTGCTTGTGTGCCCTGACCCAAGGATTGTCACCGTCTGTCTAGAAGGATTAGAAAAC
ATATTGAAGGTTGGGGAAGCAGAAAAAGCCAACACTGAAGGCATTAATTACTATGCTCAG
CTGATTGATGATGCTGAGGGATTGGAAAAGATTGAAAACCTTCAGAGTCATGATAACAAT
GAAATATATGAGAAGGCTGTTAAAATACTGGAGACATACTGGTTGGAGGAGGAGGATGAA
ACAGTGCCAGCTGGTGATGGAGCACAAAATGAGTTCAATTTTGGCGGAAATGATATTCAA
CTTCCATCTGGTGGTTTCAAGTTTGGTTGA