Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038718
CDS Infomation

pacid=37443349 polypeptide=PGSC0003DMP400026315 locus=PGSC0003DMG400014964 ID=PGSC0003DMT400038718.v4.03 annot-version=v4.03
Sequence

ATGGCGTCAGTTGATGTTGAGAAGAGCAGGAGCGATATGGAGAGAGAGGAAGCCTGTTCG
GCGAAACCAACAAAGCAAGGGGAAGGGCTGAGACAGTACTATATGCAGCACATCCATGAT
CTCCAGCTCCAAGTCCGCGTAAAGACTCACAATCTTAATCGCCTTGAAGCCCAGAGGAAC
GAACTCAATTCTAAAGTGAGAATGCTCAAAGAGGAATTACAATTGCTTCAGGAGCCTGGA
TCATATGTTGGTGAAGTTGTTAAAGTAATGGGGAAGTCAAAGGTTCTAGTCAAAGTTCAT
CCTGAAGGCAAATATGTTGTCGATATTGGCAAAAATATTGACATTACAAAAATCACTCCA
TCAACTAGAGTTGCCCTGCGCAATGATAGCTATGTCCTTCATCTAATTTTGCCCAGCAAA
GTTGATCCATTGGTCAACCTCATGAAAGTTGAGAAAGTGCCAGATTCCACTTATGACATG
ATTGGTGGTCTTGACCAGCAGATCAAGGAGATTAAAGAGGTTATTGAGCTTCCTATAAAG
CATCCTGAGTTATTTGAGTCTCTTGGAATAGCTCAACCAAAGGGAGTGCTGCTCTATGGA
CCTCCAGGAACTGGGAAAACATTGTTGGCTAGGGCAGTTGCACATCACACTGATTGTACC
TTCATTAGGGTCTCTGGTTCCGAACTAGTGCAGAAATATATTGGAGAAGGTTCTCGAATG
GTGAGAGAGCTTTTTGTTATGGCCAGGGGAGAAGTTCCCTACCATGGGTTTCTCCCTGAT
TCGATCTTGGGACCTTTGTTTAAGAGGGAAGCATTGGATCTGCTAGGATGGAATCAGGGA
GTGGCAATGGTGACAGTGAAGTGCAGAGGACAATGCTTGAACTTCTCAATCAGCTTGATG
GATTTGAGGCATCAAATAAAATCAAGGCAAGCTCAGCGTGCTGTTTCAATTGTTCTGATG
GCCACAAACCGCATAGATATTCTAGATCAAGCACTCCTTAGACCAGGAAGGATAGACAGG
AAGATTGAATTTCCAAATCCCAATGAAGAGTCTCGTCAGGACATTTTGAAGATTCATTCG
AGGAAGATGAACTTGATGCGGGGGATTGATTTGAAGAAGATTGCTGAGAAGATGAGTGGT
GCTTCTGGGGCTGAACTTAAGGCTGTATGTACGGAAGCAGGGATGTTTGCTCTAAGAGAG
AGGAGGGTGCATGTGACGCAAGAAGATTTTGAGATGGCTGTTGCTAAAGTAATGAAGAAA
GAGACTGAGAAGAACATGTCACTGCGAAAGCTGTGGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026315
PEP Infomation

pacid=37443349 transcript=PGSC0003DMT400038718 locus=PGSC0003DMG400014964 ID=PGSC0003DMT400038718.v4.03 annot-version=v4.03
Sequence

MASVDVEKSRSDMEREEACSAKPTKQGEGLRQYYMQHIHDLQLQVRVKTHNLNRLEAQRN
ELNSKVRMLKEELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIGKNIDITKITP
STRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIK
HPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRM
VRELFVMARGEVPYHGFLPDSILGPLFKREALDLLGWNQGVAMVTVKCRGQCLNFSISLM
DLRHQIKSRQAQRAVSIVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRQDILKIHS
RKMNLMRGIDLKKIAEKMSGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK
ETEKNMSLRKLWK*

Transcript Sequence

Transcript ID

PGSC0003DMT400038718
Transcript Infomation

pacid=37443349 locus=PGSC0003DMG400014964 ID=PGSC0003DMT400038718.v4.03 annot-version=v4.03
Sequence

ATGGCGTCAGTTGATGTTGAGAAGAGCAGGAGCGATATGGAGAGAGAGGAAGCCTGTTCG
GCGAAACCAACAAAGCAAGGGGAAGGGCTGAGACAGTACTATATGCAGCACATCCATGAT
CTCCAGCTCCAAGTCCGCGTAAAGACTCACAATCTTAATCGCCTTGAAGCCCAGAGGAAC
GAACTCAATTCTAAAGTGAGAATGCTCAAAGAGGAATTACAATTGCTTCAGGAGCCTGGA
TCATATGTTGGTGAAGTTGTTAAAGTAATGGGGAAGTCAAAGGTTCTAGTCAAAGTTCAT
CCTGAAGGCAAATATGTTGTCGATATTGGCAAAAATATTGACATTACAAAAATCACTCCA
TCAACTAGAGTTGCCCTGCGCAATGATAGCTATGTCCTTCATCTAATTTTGCCCAGCAAA
GTTGATCCATTGGTCAACCTCATGAAAGTTGAGAAAGTGCCAGATTCCACTTATGACATG
ATTGGTGGTCTTGACCAGCAGATCAAGGAGATTAAAGAGGTTATTGAGCTTCCTATAAAG
CATCCTGAGTTATTTGAGTCTCTTGGAATAGCTCAACCAAAGGGAGTGCTGCTCTATGGA
CCTCCAGGAACTGGGAAAACATTGTTGGCTAGGGCAGTTGCACATCACACTGATTGTACC
TTCATTAGGGTCTCTGGTTCCGAACTAGTGCAGAAATATATTGGAGAAGGTTCTCGAATG
GTGAGAGAGCTTTTTGTTATGGCCAGGGGAGAAGTTCCCTACCATGGGTTTCTCCCTGAT
TCGATCTTGGGACCTTTGTTTAAGAGGGAAGCATTGGATCTGCTAGGATGGAATCAGGGA
GTGGCAATGGTGACAGTGAAGTGCAGAGGACAATGCTTGAACTTCTCAATCAGCTTGATG
GATTTGAGGCATCAAATAAAATCAAGGCAAGCTCAGCGTGCTGTTTCAATTGTTCTGATG
GCCACAAACCGCATAGATATTCTAGATCAAGCACTCCTTAGACCAGGAAGGATAGACAGG
AAGATTGAATTTCCAAATCCCAATGAAGAGTCTCGTCAGGACATTTTGAAGATTCATTCG
AGGAAGATGAACTTGATGCGGGGGATTGATTTGAAGAAGATTGCTGAGAAGATGAGTGGT
GCTTCTGGGGCTGAACTTAAGGCTGTATGTACGGAAGCAGGGATGTTTGCTCTAAGAGAG
AGGAGGGTGCATGTGACGCAAGAAGATTTTGAGATGGCTGTTGCTAAAGTAATGAAGAAA
GAGACTGAGAAGAACATGTCACTGCGAAAGCTGTGGAAGTAG