Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038700
CDS Infomation

pacid=37458504 polypeptide=PGSC0003DMP400026307 locus=PGSC0003DMG400014954 ID=PGSC0003DMT400038700.v4.03 annot-version=v4.03
Sequence

ATGTATTTTCTTTCTCATCTCTTACCACTATTAGTTGCTTGGTTTTTAGCCCTTTTTGTT
GCTCGCAAATTCAAAAGTAGAAACATAACAAGTGCAGCAATTGGTGCACCTAAAGCTCCA
GGTGCATGGCCTTTTATAGGTCACCTTCATCTTCTTAACGGTCATCTTCCCGTCTGTCGA
ACCCTAGGACTCATGGCTGATAAATATGGACCTATTTTTCAATTACAACTTGGTGATCAT
CCCGCTATTGTGGTCAGTAATTGGGAAATAGTTAAAGATTGCTTCACAGCTAACAATGAC
AAAATATTTTCTAGTAGACCAAATATGGCAGTAAGCAAGTATTTAGGCTATAATGGAGCC
GTTTTCGCTATGGCCCCTTACGGACCATACTGGCGTGATATACGTAAAATGGTAACTGTT
GAACTCTTAACTCACAGTCGCCTTGAGAAGCTAAAACATGTACGTACATCAGAAGTGAAT
TGTTGTATTAAAGAATTGTACTCAAATTGTCCATCACAAGTGAATTTAAGTAGTTGGTTT
GAGAACATAACGTGTAACATAATCGTTAGAATGCTTGCTGGGAAGCGATTTACTGGATGC
GCGGAGGAGATGAATTTCAAAGAATCTATAAAGAAAGCGTTGTACCTAGGTGGAGCTTTT
GTTTTTTCAGATGCTATTCCATGGCTTGAATGGATGGATATTGGTGGACATATTAAAGCA
ATGAAAGAGACTTATAAAGAAGTTGATAGTGTGTTTGATAGCTGGTTAAAACAACATATC
AATTCTATTGGAGATGGAGAACAATCTGATTTTATTGATATCATGCTTTCCACCCTTCCA
GAGGAAACCAATATGGAGTCTGCTGCATACAATCGTCATGCCATTATCAAGGCAACAACT
TTGATACTTATCATGACAGCATCAGAGAGCACTGCAGAGACATTAATATGGGCATTATCT
TTGCTAATGAATAACACTCACTCATTGAAACTAGCCCAGAATGAGCTAGATGAGCAAATA
GGAAGAAATAAATGGGTTGAAGAGTCGGACATCAAAAACCTTCCCTATTTGCAAGCTATA
GTAAAAGAAACCTTACGTCTCTACCCACCTGGTCCTTTGGCAGGGCCTCGAGAGGCCATC
GAAGATTGTTACATCGGTAAGTATCATATTAAAAAAGGCACTCGCTTGATTGTTAATCTA
TGGAAGCTTCAACGAGACTCGAGAATCTGGGAAGATCCGAATGAGTTTAAACCAGAGAGG
TGGTTTTTGAACGAACATACAAATATTAATTTTAGAGGACAACATTTTGAGTATATTCCT
TTTAGCTCTGGAAGAAGAATGTGCCCTGGTTTAACGTTTGCAACCCAAGTAGTGCATCTT
ACGCTAGCAAAATTACTTCATGGATTCAATATTTCAATGCCAAAGGAGGAACCAGTAGAT
GTAAGTGAGGGCTTAGGCATTGCCTTGCCTAAAGTCAAGCCTCTTCAACCACTTCTTTCT
CCTAGATTGGCTGTGGAACTCTACCAAAGTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026307
PEP Infomation

pacid=37458504 transcript=PGSC0003DMT400038700 locus=PGSC0003DMG400014954 ID=PGSC0003DMT400038700.v4.03 annot-version=v4.03
Sequence

MYFLSHLLPLLVAWFLALFVARKFKSRNITSAAIGAPKAPGAWPFIGHLHLLNGHLPVCR
TLGLMADKYGPIFQLQLGDHPAIVVSNWEIVKDCFTANNDKIFSSRPNMAVSKYLGYNGA
VFAMAPYGPYWRDIRKMVTVELLTHSRLEKLKHVRTSEVNCCIKELYSNCPSQVNLSSWF
ENITCNIIVRMLAGKRFTGCAEEMNFKESIKKALYLGGAFVFSDAIPWLEWMDIGGHIKA
MKETYKEVDSVFDSWLKQHINSIGDGEQSDFIDIMLSTLPEETNMESAAYNRHAIIKATT
LILIMTASESTAETLIWALSLLMNNTHSLKLAQNELDEQIGRNKWVEESDIKNLPYLQAI
VKETLRLYPPGPLAGPREAIEDCYIGKYHIKKGTRLIVNLWKLQRDSRIWEDPNEFKPER
WFLNEHTNINFRGQHFEYIPFSSGRRMCPGLTFATQVVHLTLAKLLHGFNISMPKEEPVD
VSEGLGIALPKVKPLQPLLSPRLAVELYQSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400038700
Transcript Infomation

pacid=37458504 locus=PGSC0003DMG400014954 ID=PGSC0003DMT400038700.v4.03 annot-version=v4.03
Sequence

ATGTATTTTCTTTCTCATCTCTTACCACTATTAGTTGCTTGGTTTTTAGCCCTTTTTGTT
GCTCGCAAATTCAAAAGTAGAAACATAACAAGTGCAGCAATTGGTGCACCTAAAGCTCCA
GGTGCATGGCCTTTTATAGGTCACCTTCATCTTCTTAACGGTCATCTTCCCGTCTGTCGA
ACCCTAGGACTCATGGCTGATAAATATGGACCTATTTTTCAATTACAACTTGGTGATCAT
CCCGCTATTGTGGTCAGTAATTGGGAAATAGTTAAAGATTGCTTCACAGCTAACAATGAC
AAAATATTTTCTAGTAGACCAAATATGGCAGTAAGCAAGTATTTAGGCTATAATGGAGCC
GTTTTCGCTATGGCCCCTTACGGACCATACTGGCGTGATATACGTAAAATGGTAACTGTT
GAACTCTTAACTCACAGTCGCCTTGAGAAGCTAAAACATGTACGTACATCAGAAGTGAAT
TGTTGTATTAAAGAATTGTACTCAAATTGTCCATCACAAGTGAATTTAAGTAGTTGGTTT
GAGAACATAACGTGTAACATAATCGTTAGAATGCTTGCTGGGAAGCGATTTACTGGATGC
GCGGAGGAGATGAATTTCAAAGAATCTATAAAGAAAGCGTTGTACCTAGGTGGAGCTTTT
GTTTTTTCAGATGCTATTCCATGGCTTGAATGGATGGATATTGGTGGACATATTAAAGCA
ATGAAAGAGACTTATAAAGAAGTTGATAGTGTGTTTGATAGCTGGTTAAAACAACATATC
AATTCTATTGGAGATGGAGAACAATCTGATTTTATTGATATCATGCTTTCCACCCTTCCA
GAGGAAACCAATATGGAGTCTGCTGCATACAATCGTCATGCCATTATCAAGGCAACAACT
TTGATACTTATCATGACAGCATCAGAGAGCACTGCAGAGACATTAATATGGGCATTATCT
TTGCTAATGAATAACACTCACTCATTGAAACTAGCCCAGAATGAGCTAGATGAGCAAATA
GGAAGAAATAAATGGGTTGAAGAGTCGGACATCAAAAACCTTCCCTATTTGCAAGCTATA
GTAAAAGAAACCTTACGTCTCTACCCACCTGGTCCTTTGGCAGGGCCTCGAGAGGCCATC
GAAGATTGTTACATCGGTAAGTATCATATTAAAAAAGGCACTCGCTTGATTGTTAATCTA
TGGAAGCTTCAACGAGACTCGAGAATCTGGGAAGATCCGAATGAGTTTAAACCAGAGAGG
TGGTTTTTGAACGAACATACAAATATTAATTTTAGAGGACAACATTTTGAGTATATTCCT
TTTAGCTCTGGAAGAAGAATGTGCCCTGGTTTAACGTTTGCAACCCAAGTAGTGCATCTT
ACGCTAGCAAAATTACTTCATGGATTCAATATTTCAATGCCAAAGGAGGAACCAGTAGAT
GTAAGTGAGGGCTTAGGCATTGCCTTGCCTAAAGTCAAGCCTCTTCAACCACTTCTTTCT
CCTAGATTGGCTGTGGAACTCTACCAAAGTCTTTGA