Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038619
CDS Infomation

pacid=37444119 polypeptide=PGSC0003DMP400026252 locus=PGSC0003DMG400014918 ID=PGSC0003DMT400038619.v4.03 annot-version=v4.03
Sequence

ATGGTTCTTGGTCTGAGGTCAAAGCACAAAAAGGGTGCTTCTGTTCAGGTGGAGTATGTT
ATTCAGGTAGATGAGATTAAGCCTTGGCCTCCATCACAGTCCCTTAAGTCTGTTCAATCT
GTATTGCTTCAATGGGAAAATGATGGTCAGAACTCTGGTTCTGTTGTGTCTACTGTTGGC
GATGGTACCATTGAATTCAAGGACTCTTTTACCCTTTCGTTAACGTTGTGTCGCGAAAAG
AAGGCACATGACAAGTTTCAGAAGAATTTCTTAGACTTCTATTTGTATGAGCTACGTAAG
GATAAGACGACGAGGGGACAACTTTTGGGGACATCAGTAATAAATCTTGCAGATTTTGGA
CTGATTGAGGAGGTTGTGTCTATTTACACTCCAGTCAGCTGCAAGAAGAGTTCTAAGAAC
TCTGAGCAACCAGCTCTGTTTGTTAGCATACATCCTACTGAGAGGGGTAGCTCAAGTTCA
TCCCAAGTTGGTGTAACGAGAGAAGGGGATGGACAAGAATCCGTTGTGGATTCAGTGAAT
GGAAGAAATGAGGATGATGATGATATTGCATCTTTCACTGATGATGATGAATCGTCACAT
TCATCGCAAAATGTTGCTGAGGCTGCAAGGTTTTCACCATCTCAACAAGGAAAGGTTGCA
CATGAATTCATACCTGATAACGTGCTGAGGGACAATCCAGAACGTGATATACTTTTGGGA
ATGGACTCTGCAGCAATGCTCATGGATTTTACTAGTAGAAGTTCTAGAAATGTGGCTCCA
GGGTTGTCAAGTAGCATATCTTTAAACAGAGAAAATTATGTGAGCAACACCACTTCTTTG
TCTAAATATTCTGAAAGAAGTATGACATCAATACAGAAGAAGTCTGCTTCCCAAGTAACA
GGATCCTCTTCCTCATTACAAAGTTATGTAAATAAAAATGGGAAGGCAAGCACCTCTGTG
ACAGCCCTCGAGCAGCAAATTCTGATGTATGATGTTCAAGAAGATAATGCTGACAAGAAA
GGTCTCCCCAAAGACGGTATCAAACTCTCTGCAGAAAGTGGACATGTTCATAGATTTGCA
TCCAACTTAAGCTATCTCGATGAATCTAATGAGGATAACTCTGACCCTGCCGATTCCTAT
AGTGATCGCTGTCAAGACTCCCGAGATAAACCAAAGGGCCACACTGGAAGTACAGTACTC
AAAGATTTACATGTTGGTGTAGTGAACGGAAAAGGGATGGAGCTTCTAGAGATTGACCAG
GATGAAGTGAGCTTGAAAGAGATTCCTCATTTTTCAGAAGTCAAATCAGGCAGAAAACAC
AGCTTTTTGAAGGGTGATACTCTTAATTCGAATAAGGTACTTGGATTGCAGGGATCTAGC
ATCACCAATGGTAAATCAAAGCATGCAAAGTCTCACCAATTGAATGACTTAGCTAACAGA
AGTGGACTTCCTGGTAACAGCCAGAATCCAGAGAAGTCTGCAAAACAGCATGTTTCGGAA
GATGCTCGGTCTAATGGTAAAGGTAATAAACCAATGAATGGATCTCCTGACAGAAAAAAT
GAAGGGAAGTCTAGAATAGAGACACTTGAGGAAGAACTAAGGGAAGCGGCAGTTGTCGAG
GTTAGCCTTTATTCTGTAGTGGCTGAGCATGGCAGTTCTGCACACAAAGTCCATGCTCCT
GCTCGACGCCTTTCTCGATTTTATGTTCATGCTTGCAGAGCAAAGTCCCGAGCTAAACAG
GCAGGTGCTGCAAGAGCTTCTGTCTCAGGTTTAGTTTTGGTTTCAAAAGCTTGTGGAAAT
GATGTTCCAAGGTTGACTTTTTGGTTGTCGAATTCAGTCATGTTGAGAGCAATTGTTAGC
CAGGCTGCTGGAGGAAGGAGAGAAGATGATAGACCATATGCGGAGAGTAATATGGGCAAA
ACTAGTTTAAATGGAAGATCCTTGAAAAAAAGGAATGAGGTTTCTTTCAATAAAGCTGTC
AACGATAGTCTAACAGAAGAACTTGGTGACTGGGAGGATATTGAAACCTTTATGCTTGCA
CTGGAACAAGTTGAAGCTTGGATTTTCTCCCGCATTGTGGAATCTGTGTGGTGGCAGACT
TTGACTCCACACATGCAAAATACAGCTGCAAACTCTGGTGGCAGATCAATGAGCTCAAGT
GTTAAGAAAACTTATGGACGCAGGTGTAGTTTAGGGGATCAAGAGCAAGGTAATTTCTCC
ATTGATCTCTGGAAGAAGGCTTTCAAGGATGCCTGTGAAAGGCTTTGCCCAGTTAGGGCA
GGAGGACATGAGTGTGGCTGCTTGCCATTGCCAGCTAGATTGGTAATGGAACAGTTGGTG
AGTAGATTGGATGTGGCTATGTTCAATGCAATCCTTCGTGAATCAGCTGAAGAAATGCCA
ACAGATCCAGTATCAGATCCCATTTGTGATGCTAAGGTCCTCCCAATCCCTGCAGGGAAA
TCAAGCTTTGGCGCCGGTGCACAACTAAAAAATGCTATTGGGGACTGGTCTAGATGGCTA
TCTACTCTCTTTGGAATTGAGGAAAATGATTCCTCAGGTGATAATGAAGACAAGGCACCA
GGTCCCGCCAAGCCTTTCCGTCTGCTCAATGCTCTAAGTGATCTAATGATGCTTCCCTTT
GAAATGCTCGCCGATCCTCAAACTAGGAAAGAGGTTTGTCCTATACTTGGTCCAACTTTG
ATCAGTAGGGTGCTCAATGGTTTTGTTCCAGATGAATTCTGTCCAATCCCAGTTCCCCCA
GAGGTCCTCAGGGCACTGGATTCTGAGGATGCTGAGGATACTCCTGAAGAATCTATCTCC
ACTGTCCCGTTCACTGCATCGCCTACTACATATTTACCTCCTTCAGTAAGGTCCATTAAA
ACCTTTCTGGGAGAGACTGGAAACCAATCTTTACAAAGAAGCAGTTCATCAGTACTGAAG
AAATCATACACCAGTGATGATGAGCTTGATGAATTGGACTCGCCCTTGAGTTCAATTGTA
GCTGATAGGCTCCGTGGTTCTCCTAATCTAGCAAAGATCAACTTGATCGCCAAGGGGAAG
GGTGATCGGAAAGTCGTTAGATATCAGCTGCTCCGACAAGTCTGGAGAGCTGAAGAACAG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400026252
PEP Infomation

pacid=37444119 transcript=PGSC0003DMT400038619 locus=PGSC0003DMG400014918 ID=PGSC0003DMT400038619.v4.03 annot-version=v4.03
Sequence

MVLGLRSKHKKGASVQVEYVIQVDEIKPWPPSQSLKSVQSVLLQWENDGQNSGSVVSTVG
DGTIEFKDSFTLSLTLCREKKAHDKFQKNFLDFYLYELRKDKTTRGQLLGTSVINLADFG
LIEEVVSIYTPVSCKKSSKNSEQPALFVSIHPTERGSSSSSQVGVTREGDGQESVVDSVN
GRNEDDDDIASFTDDDESSHSSQNVAEAARFSPSQQGKVAHEFIPDNVLRDNPERDILLG
MDSAAMLMDFTSRSSRNVAPGLSSSISLNRENYVSNTTSLSKYSERSMTSIQKKSASQVT
GSSSSLQSYVNKNGKASTSVTALEQQILMYDVQEDNADKKGLPKDGIKLSAESGHVHRFA
SNLSYLDESNEDNSDPADSYSDRCQDSRDKPKGHTGSTVLKDLHVGVVNGKGMELLEIDQ
DEVSLKEIPHFSEVKSGRKHSFLKGDTLNSNKVLGLQGSSITNGKSKHAKSHQLNDLANR
SGLPGNSQNPEKSAKQHVSEDARSNGKGNKPMNGSPDRKNEGKSRIETLEEELREAAVVE
VSLYSVVAEHGSSAHKVHAPARRLSRFYVHACRAKSRAKQAGAARASVSGLVLVSKACGN
DVPRLTFWLSNSVMLRAIVSQAAGGRREDDRPYAESNMGKTSLNGRSLKKRNEVSFNKAV
NDSLTEELGDWEDIETFMLALEQVEAWIFSRIVESVWWQTLTPHMQNTAANSGGRSMSSS
VKKTYGRRCSLGDQEQGNFSIDLWKKAFKDACERLCPVRAGGHECGCLPLPARLVMEQLV
SRLDVAMFNAILRESAEEMPTDPVSDPICDAKVLPIPAGKSSFGAGAQLKNAIGDWSRWL
STLFGIEENDSSGDNEDKAPGPAKPFRLLNALSDLMMLPFEMLADPQTRKEVCPILGPTL
ISRVLNGFVPDEFCPIPVPPEVLRALDSEDAEDTPEESISTVPFTASPTTYLPPSVRSIK
TFLGETGNQSLQRSSSSVLKKSYTSDDELDELDSPLSSIVADRLRGSPNLAKINLIAKGK
GDRKVVRYQLLRQVWRAEEQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400038619
Transcript Infomation

pacid=37444119 locus=PGSC0003DMG400014918 ID=PGSC0003DMT400038619.v4.03 annot-version=v4.03
Sequence

ATGGTTCTTGGTCTGAGGTCAAAGCACAAAAAGGGTGCTTCTGTTCAGGTGGAGTATGTT
ATTCAGGTAGATGAGATTAAGCCTTGGCCTCCATCACAGTCCCTTAAGTCTGTTCAATCT
GTATTGCTTCAATGGGAAAATGATGGTCAGAACTCTGGTTCTGTTGTGTCTACTGTTGGC
GATGGTACCATTGAATTCAAGGACTCTTTTACCCTTTCGTTAACGTTGTGTCGCGAAAAG
AAGGCACATGACAAGTTTCAGAAGAATTTCTTAGACTTCTATTTGTATGAGCTACGTAAG
GATAAGACGACGAGGGGACAACTTTTGGGGACATCAGTAATAAATCTTGCAGATTTTGGA
CTGATTGAGGAGGTTGTGTCTATTTACACTCCAGTCAGCTGCAAGAAGAGTTCTAAGAAC
TCTGAGCAACCAGCTCTGTTTGTTAGCATACATCCTACTGAGAGGGGTAGCTCAAGTTCA
TCCCAAGTTGGTGTAACGAGAGAAGGGGATGGACAAGAATCCGTTGTGGATTCAGTGAAT
GGAAGAAATGAGGATGATGATGATATTGCATCTTTCACTGATGATGATGAATCGTCACAT
TCATCGCAAAATGTTGCTGAGGCTGCAAGGTTTTCACCATCTCAACAAGGAAAGGTTGCA
CATGAATTCATACCTGATAACGTGCTGAGGGACAATCCAGAACGTGATATACTTTTGGGA
ATGGACTCTGCAGCAATGCTCATGGATTTTACTAGTAGAAGTTCTAGAAATGTGGCTCCA
GGGTTGTCAAGTAGCATATCTTTAAACAGAGAAAATTATGTGAGCAACACCACTTCTTTG
TCTAAATATTCTGAAAGAAGTATGACATCAATACAGAAGAAGTCTGCTTCCCAAGTAACA
GGATCCTCTTCCTCATTACAAAGTTATGTAAATAAAAATGGGAAGGCAAGCACCTCTGTG
ACAGCCCTCGAGCAGCAAATTCTGATGTATGATGTTCAAGAAGATAATGCTGACAAGAAA
GGTCTCCCCAAAGACGGTATCAAACTCTCTGCAGAAAGTGGACATGTTCATAGATTTGCA
TCCAACTTAAGCTATCTCGATGAATCTAATGAGGATAACTCTGACCCTGCCGATTCCTAT
AGTGATCGCTGTCAAGACTCCCGAGATAAACCAAAGGGCCACACTGGAAGTACAGTACTC
AAAGATTTACATGTTGGTGTAGTGAACGGAAAAGGGATGGAGCTTCTAGAGATTGACCAG
GATGAAGTGAGCTTGAAAGAGATTCCTCATTTTTCAGAAGTCAAATCAGGCAGAAAACAC
AGCTTTTTGAAGGGTGATACTCTTAATTCGAATAAGGTACTTGGATTGCAGGGATCTAGC
ATCACCAATGGTAAATCAAAGCATGCAAAGTCTCACCAATTGAATGACTTAGCTAACAGA
AGTGGACTTCCTGGTAACAGCCAGAATCCAGAGAAGTCTGCAAAACAGCATGTTTCGGAA
GATGCTCGGTCTAATGGTAAAGGTAATAAACCAATGAATGGATCTCCTGACAGAAAAAAT
GAAGGGAAGTCTAGAATAGAGACACTTGAGGAAGAACTAAGGGAAGCGGCAGTTGTCGAG
GTTAGCCTTTATTCTGTAGTGGCTGAGCATGGCAGTTCTGCACACAAAGTCCATGCTCCT
GCTCGACGCCTTTCTCGATTTTATGTTCATGCTTGCAGAGCAAAGTCCCGAGCTAAACAG
GCAGGTGCTGCAAGAGCTTCTGTCTCAGGTTTAGTTTTGGTTTCAAAAGCTTGTGGAAAT
GATGTTCCAAGGTTGACTTTTTGGTTGTCGAATTCAGTCATGTTGAGAGCAATTGTTAGC
CAGGCTGCTGGAGGAAGGAGAGAAGATGATAGACCATATGCGGAGAGTAATATGGGCAAA
ACTAGTTTAAATGGAAGATCCTTGAAAAAAAGGAATGAGGTTTCTTTCAATAAAGCTGTC
AACGATAGTCTAACAGAAGAACTTGGTGACTGGGAGGATATTGAAACCTTTATGCTTGCA
CTGGAACAAGTTGAAGCTTGGATTTTCTCCCGCATTGTGGAATCTGTGTGGTGGCAGACT
TTGACTCCACACATGCAAAATACAGCTGCAAACTCTGGTGGCAGATCAATGAGCTCAAGT
GTTAAGAAAACTTATGGACGCAGGTGTAGTTTAGGGGATCAAGAGCAAGGTAATTTCTCC
ATTGATCTCTGGAAGAAGGCTTTCAAGGATGCCTGTGAAAGGCTTTGCCCAGTTAGGGCA
GGAGGACATGAGTGTGGCTGCTTGCCATTGCCAGCTAGATTGGTAATGGAACAGTTGGTG
AGTAGATTGGATGTGGCTATGTTCAATGCAATCCTTCGTGAATCAGCTGAAGAAATGCCA
ACAGATCCAGTATCAGATCCCATTTGTGATGCTAAGGTCCTCCCAATCCCTGCAGGGAAA
TCAAGCTTTGGCGCCGGTGCACAACTAAAAAATGCTATTGGGGACTGGTCTAGATGGCTA
TCTACTCTCTTTGGAATTGAGGAAAATGATTCCTCAGGTGATAATGAAGACAAGGCACCA
GGTCCCGCCAAGCCTTTCCGTCTGCTCAATGCTCTAAGTGATCTAATGATGCTTCCCTTT
GAAATGCTCGCCGATCCTCAAACTAGGAAAGAGGTTTGTCCTATACTTGGTCCAACTTTG
ATCAGTAGGGTGCTCAATGGTTTTGTTCCAGATGAATTCTGTCCAATCCCAGTTCCCCCA
GAGGTCCTCAGGGCACTGGATTCTGAGGATGCTGAGGATACTCCTGAAGAATCTATCTCC
ACTGTCCCGTTCACTGCATCGCCTACTACATATTTACCTCCTTCAGTAAGGTCCATTAAA
ACCTTTCTGGGAGAGACTGGAAACCAATCTTTACAAAGAAGCAGTTCATCAGTACTGAAG
AAATCATACACCAGTGATGATGAGCTTGATGAATTGGACTCGCCCTTGAGTTCAATTGTA
GCTGATAGGCTCCGTGGTTCTCCTAATCTAGCAAAGATCAACTTGATCGCCAAGGGGAAG
GGTGATCGGAAAGTCGTTAGATATCAGCTGCTCCGACAAGTCTGGAGAGCTGAAGAACAG
TAA