Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038574
CDS Infomation

pacid=37425558 polypeptide=PGSC0003DMP400026218 locus=PGSC0003DMG400014900 ID=PGSC0003DMT400038574.v4.03 annot-version=v4.03
Sequence

ATGGCCTATATGTGTACGGACAGTGGAAATCTAATGGCAATCGCTCAACAAGTTATAAAG
CAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAACAACAGCAGCAGCAGCAGCAACAA
CAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCACCACTCATCAAACC
TTAACTAATAGTCCCACTTTAGGATATGGACTTACCGGGGCGGGTTTTGCAGACCCATTT
CAGGTCGCCGGAGGGACTGATGGCGGCGAGCCGGGATTTCAGTTCCCTAACTTGGAACAT
CATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCA
GATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAA
TCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTATACGGAGATCCGTTC
TCGAGTTGTCCGAATCGTCTCAGTATCGGTTCTTCTCCTCCGCCTCCGCCTTCTTCCGAT
CTGAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAACTCACTACAACCACAGACA
TCTCCGTGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGTGTGTAAAGAA
TCCAAGGTGGTATCAGTTGATGTGCTGCCCTGTAGTTCCCCTGAAAGTTTTTCTTCAAAA
CCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTA
GTAAAATCTTTGATTCGACTTAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGA
GTTGGGTTCTATTTCTTAGAAGCTCTTTACAATGGGCTGTCGTCGTGTCAAGCAGAAAGA
ACTCCATCAATCTTTGGTACTACGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAAT
GATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCA
ACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGG
GCTGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGGAAACCAGTCAGTGTTAGAATC
TCTGGTATTCCATCAGTGGTATTGGGTAACTCTCCGGCAGCTTCACTTTTAGCTACAGGG
AATCGTCTTCGTGACTTTGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCGATATTG
ACTCCAGTTCAGGAACTAAACGGGTCTAGTTTTCGAATTGATCCAGATGAAATCTTAGCT
GTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAGAAACT
GCACTCAGTCTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTG
AATTTGAACGATGTAGGATTCCTGCAGCGGTTTAAGAATGCACTGAAATATTACTCAACA
GTTTTCGAGTCGTTGGATCCGAGCTTGACCCGAGACTCCCCGGAGAGAGTACAAGTGGAA
AGACTGATACTTGGCAGGAGAATTGCCGGAGCGGTGGGCCTAGACGACGGCGGAACCAGA
AGAGAATGTATGGAAGATAAAGAACATTGGAGAGAATTAATGGAAGGGGCTGGTTTTAAA
CCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAAT
TATAGTTCATCATTTGGATTAATTGATTCTGCACCTGGGTTTCTCTCCTTGGCTTGGAAA
GATAATCCCCTTTTGACTGTTTCTTCATGGCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026218
PEP Infomation

pacid=37425558 transcript=PGSC0003DMT400038574 locus=PGSC0003DMG400014900 ID=PGSC0003DMT400038574.v4.03 annot-version=v4.03
Sequence

MAYMCTDSGNLMAIAQQVIKQKQQQEQLQQQEQQQQQQQQQFLGVNPLCLSPWTSTTHQT
LTNSPTLGYGLTGAGFADPFQVAGGTDGGEPGFQFPNLEHHSTGFRFADFGGGPGGEFDS
DEWMESLIGGGDSTGSSNLQSGCEAWQTSSEFTTLYGDPFSSCPNRLSIGSSPPPPPSSD
LNGVIFSETQKNLNSLQPQTSPWVAPSSSPPPIVQPVCKESKVVSVDVLPCSSPESFSSK
PLLKSLVECARLAESEPENVVKSLIRLRESVSQQGDPMERVGFYFLEALYNGLSSCQAER
TPSIFGTTPEELTLSYKAFNDACPYSKFAHLTANQAILEATEKATRIHIVDFGIVHGIQW
AAFLQALATRSAGKPVSVRISGIPSVVLGNSPAASLLATGNRLRDFAKLLDLNFEFEPIL
TPVQELNGSSFRIDPDEILAVNFMLQLYNLLDETNVGVETALSLAKSLNPSIVTLGEYEV
NLNDVGFLQRFKNALKYYSTVFESLDPSLTRDSPERVQVERLILGRRIAGAVGLDDGGTR
RECMEDKEHWRELMEGAGFKPVTLSHYAMSQAKILLWNYNYSSSFGLIDSAPGFLSLAWK
DNPLLTVSSWH*

Transcript Sequence

Transcript ID

PGSC0003DMT400038574
Transcript Infomation

pacid=37425558 locus=PGSC0003DMG400014900 ID=PGSC0003DMT400038574.v4.03 annot-version=v4.03
Sequence

ATGGCCTATATGTGTACGGACAGTGGAAATCTAATGGCAATCGCTCAACAAGTTATAAAG
CAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAACAACAGCAGCAGCAGCAGCAACAA
CAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCACCACTCATCAAACC
TTAACTAATAGTCCCACTTTAGGATATGGACTTACCGGGGCGGGTTTTGCAGACCCATTT
CAGGTCGCCGGAGGGACTGATGGCGGCGAGCCGGGATTTCAGTTCCCTAACTTGGAACAT
CATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCA
GATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAA
TCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTATACGGAGATCCGTTC
TCGAGTTGTCCGAATCGTCTCAGTATCGGTTCTTCTCCTCCGCCTCCGCCTTCTTCCGAT
CTGAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAACTCACTACAACCACAGACA
TCTCCGTGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGTGTGTAAAGAA
TCCAAGGTGGTATCAGTTGATGTGCTGCCCTGTAGTTCCCCTGAAAGTTTTTCTTCAAAA
CCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTA
GTAAAATCTTTGATTCGACTTAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGA
GTTGGGTTCTATTTCTTAGAAGCTCTTTACAATGGGCTGTCGTCGTGTCAAGCAGAAAGA
ACTCCATCAATCTTTGGTACTACGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAAT
GATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCA
ACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGG
GCTGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGGAAACCAGTCAGTGTTAGAATC
TCTGGTATTCCATCAGTGGTATTGGGTAACTCTCCGGCAGCTTCACTTTTAGCTACAGGG
AATCGTCTTCGTGACTTTGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCGATATTG
ACTCCAGTTCAGGAACTAAACGGGTCTAGTTTTCGAATTGATCCAGATGAAATCTTAGCT
GTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAGAAACT
GCACTCAGTCTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTG
AATTTGAACGATGTAGGATTCCTGCAGCGGTTTAAGAATGCACTGAAATATTACTCAACA
GTTTTCGAGTCGTTGGATCCGAGCTTGACCCGAGACTCCCCGGAGAGAGTACAAGTGGAA
AGACTGATACTTGGCAGGAGAATTGCCGGAGCGGTGGGCCTAGACGACGGCGGAACCAGA
AGAGAATGTATGGAAGATAAAGAACATTGGAGAGAATTAATGGAAGGGGCTGGTTTTAAA
CCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAAT
TATAGTTCATCATTTGGATTAATTGATTCTGCACCTGGGTTTCTCTCCTTGGCTTGGAAA
GATAATCCCCTTTTGACTGTTTCTTCATGGCACTAA