Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038537
CDS Infomation

pacid=37462677 polypeptide=PGSC0003DMP400026190 locus=PGSC0003DMG400014877 ID=PGSC0003DMT400038537.v4.03 annot-version=v4.03
Sequence

ATGAAGTATATGAAGCTTGGATCTAAGCCTGATCAGTTTCAGACTGAAGGAGATAGTATC
AGGTATGTAGCAGCTGAATTGGCTACTGACATGGTTATCAATGTTGGAGATGTGAAATTT
TACCTCCACAAGTTCCCCCTTCTGTTGAAGAGTTATCGCTTGCAGAAACTGATTGCTTGT
ACAAACGAGGAAAATAGTGATAAAATCAACATCCATGATATACCTGGTGGACCTGCTGCT
TTTGAAGTATGCGCAAAGTTCTGTTATAATATGACAGTAACTTTGAATGCATATAATGTC
GTTGCAGCTCGTTGTGCAGCAGAGTACTTGGAAATGTATGAGTCAGTTGAGAAGGGAAAT
CTTATCTACAAGATTGAAGTTTTTCTTACGTCTAGCATCTTCCGGAGCTGGAAAGACTCC
ATCATTGTTCTTCAGACCACAAAAGCTTTTCTTCCCTGGTCCGAGGAATTAAAAATCGTT
AGTCATTGCCTGGAATCTGTAGCTTCTAAAGCTTCTGTAGACACCTCAAAGGTGGACTGG
TCTTACACTTATAACCATAAAAAGCTTCCATCCGAAAACGGAAGTGATCTGCACTGTAAC
GCGGTGAGCTGGCAACAACTTGTTCCAATAGACTGGTGGGTTGAGGACCTTTGTGAGCTT
CATATTGATTTGTATAAACGGGTCATAGTAACAATAAAATCAAAAGGAAGGATTTCTTCA
GAAGCAATAGGTGAAGCATTGAAAGCATATGCCAACCGGAGGCTCCCGGGATTCAGCAAG
GGCAGTATACAAGGAAGTGATCCTGAAAAGTATCGGTACATGGTTGATACGATTAGTTGG
TTGTTGCCCAAAGAGAAGAACAGTGTTTCCTGCAGTTTCTTGATCAAATTGCTGCAAACA
TCTATTGCATTCGAATGTGGACAAACGACGAGAAGTGAACTGAAGAGGAGGATTGGCCTG
CATATGGAAGATGCAACAGTAGGTGACTTACTAATTCGAGCTCCAGATAGTGAGACTATT
ATATTCGATATTGACATAGTACACGACCTCGTAGAGAATTTCATGTTGCATCAAAAGAGC
AGTCAGATTGATAGTTCGGCAGATAATAGATTCCACGATATATGCCCCACGTTTGCATCA
GATGCTTCCGAAGTAAAGATGGCTAGGGTAATCGATGGATACCTTGCTGAAGTTGCTAGA
GATCCAAATCTACCACTATCGAAATTTATCAATCTTGCAGAATTGGTCTCTAGCTTCTCT
AGACCTTCCCATGATGGAATTTACCGTGCTATTGACATGTATCTTAAGGAACATCCTGGG
ATAACCAAAAGCGAGAGGAAAAGAATTTGTAGGCTAATGGACTGCAGGAAGCTATCAGCT
GAGGCCTGCATGCATGCTGTGCAGAATGAGCGCCTTCCTTTACGAGTAGTTGTACAAGTT
CTGTTCTTTGAGCAACTCAGAGCCACAGCATCATCCGGTGGTGGCAGCACTCCTGACCTG
ACTAGATCGGTCAAGTCCTTGCTCCCGGTGGGATCTCAGAGGTGCTCCACATCTGCTACA
TCCAACATTGAGGACAATCCGGATGCTGTGCTCACAGCCAAGGAACTTAAAGCTCTGAAA
GGTGAGCTTGCTGCTCTAAGATTGAGAGACAGAGGAGATAACAATTGTAGTAACTTGAAT
GACACAAAAACAAATGCTGCAACGGTTGACGATAGCAAAGTGAGGAGTTCAATCATGTCC
AAAAAGATGCTCTCAAAACTATGGTCAAATAAAGAAAGACAAAGTGAGAATAGTAGCTCA
GATACATCAGAAAGCCCATCATCTTCTAATGCAGGGGAAACAAAGTCTACCTCATGTAGA
AGTGGGAGGCATTCCCTCTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026190
PEP Infomation

pacid=37462677 transcript=PGSC0003DMT400038537 locus=PGSC0003DMG400014877 ID=PGSC0003DMT400038537.v4.03 annot-version=v4.03
Sequence

MKYMKLGSKPDQFQTEGDSIRYVAAELATDMVINVGDVKFYLHKFPLLLKSYRLQKLIAC
TNEENSDKINIHDIPGGPAAFEVCAKFCYNMTVTLNAYNVVAARCAAEYLEMYESVEKGN
LIYKIEVFLTSSIFRSWKDSIIVLQTTKAFLPWSEELKIVSHCLESVASKASVDTSKVDW
SYTYNHKKLPSENGSDLHCNAVSWQQLVPIDWWVEDLCELHIDLYKRVIVTIKSKGRISS
EAIGEALKAYANRRLPGFSKGSIQGSDPEKYRYMVDTISWLLPKEKNSVSCSFLIKLLQT
SIAFECGQTTRSELKRRIGLHMEDATVGDLLIRAPDSETIIFDIDIVHDLVENFMLHQKS
SQIDSSADNRFHDICPTFASDASEVKMARVIDGYLAEVARDPNLPLSKFINLAELVSSFS
RPSHDGIYRAIDMYLKEHPGITKSERKRICRLMDCRKLSAEACMHAVQNERLPLRVVVQV
LFFEQLRATASSGGGSTPDLTRSVKSLLPVGSQRCSTSATSNIEDNPDAVLTAKELKALK
GELAALRLRDRGDNNCSNLNDTKTNAATVDDSKVRSSIMSKKMLSKLWSNKERQSENSSS
DTSESPSSSNAGETKSTSCRSGRHSLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400038537
Transcript Infomation

pacid=37462677 locus=PGSC0003DMG400014877 ID=PGSC0003DMT400038537.v4.03 annot-version=v4.03
Sequence

ATGAAGTATATGAAGCTTGGATCTAAGCCTGATCAGTTTCAGACTGAAGGAGATAGTATC
AGGTATGTAGCAGCTGAATTGGCTACTGACATGGTTATCAATGTTGGAGATGTGAAATTT
TACCTCCACAAGTTCCCCCTTCTGTTGAAGAGTTATCGCTTGCAGAAACTGATTGCTTGT
ACAAACGAGGAAAATAGTGATAAAATCAACATCCATGATATACCTGGTGGACCTGCTGCT
TTTGAAGTATGCGCAAAGTTCTGTTATAATATGACAGTAACTTTGAATGCATATAATGTC
GTTGCAGCTCGTTGTGCAGCAGAGTACTTGGAAATGTATGAGTCAGTTGAGAAGGGAAAT
CTTATCTACAAGATTGAAGTTTTTCTTACGTCTAGCATCTTCCGGAGCTGGAAAGACTCC
ATCATTGTTCTTCAGACCACAAAAGCTTTTCTTCCCTGGTCCGAGGAATTAAAAATCGTT
AGTCATTGCCTGGAATCTGTAGCTTCTAAAGCTTCTGTAGACACCTCAAAGGTGGACTGG
TCTTACACTTATAACCATAAAAAGCTTCCATCCGAAAACGGAAGTGATCTGCACTGTAAC
GCGGTGAGCTGGCAACAACTTGTTCCAATAGACTGGTGGGTTGAGGACCTTTGTGAGCTT
CATATTGATTTGTATAAACGGGTCATAGTAACAATAAAATCAAAAGGAAGGATTTCTTCA
GAAGCAATAGGTGAAGCATTGAAAGCATATGCCAACCGGAGGCTCCCGGGATTCAGCAAG
GGCAGTATACAAGGAAGTGATCCTGAAAAGTATCGGTACATGGTTGATACGATTAGTTGG
TTGTTGCCCAAAGAGAAGAACAGTGTTTCCTGCAGTTTCTTGATCAAATTGCTGCAAACA
TCTATTGCATTCGAATGTGGACAAACGACGAGAAGTGAACTGAAGAGGAGGATTGGCCTG
CATATGGAAGATGCAACAGTAGGTGACTTACTAATTCGAGCTCCAGATAGTGAGACTATT
ATATTCGATATTGACATAGTACACGACCTCGTAGAGAATTTCATGTTGCATCAAAAGAGC
AGTCAGATTGATAGTTCGGCAGATAATAGATTCCACGATATATGCCCCACGTTTGCATCA
GATGCTTCCGAAGTAAAGATGGCTAGGGTAATCGATGGATACCTTGCTGAAGTTGCTAGA
GATCCAAATCTACCACTATCGAAATTTATCAATCTTGCAGAATTGGTCTCTAGCTTCTCT
AGACCTTCCCATGATGGAATTTACCGTGCTATTGACATGTATCTTAAGGAACATCCTGGG
ATAACCAAAAGCGAGAGGAAAAGAATTTGTAGGCTAATGGACTGCAGGAAGCTATCAGCT
GAGGCCTGCATGCATGCTGTGCAGAATGAGCGCCTTCCTTTACGAGTAGTTGTACAAGTT
CTGTTCTTTGAGCAACTCAGAGCCACAGCATCATCCGGTGGTGGCAGCACTCCTGACCTG
ACTAGATCGGTCAAGTCCTTGCTCCCGGTGGGATCTCAGAGGTGCTCCACATCTGCTACA
TCCAACATTGAGGACAATCCGGATGCTGTGCTCACAGCCAAGGAACTTAAAGCTCTGAAA
GGTGAGCTTGCTGCTCTAAGATTGAGAGACAGAGGAGATAACAATTGTAGTAACTTGAAT
GACACAAAAACAAATGCTGCAACGGTTGACGATAGCAAAGTGAGGAGTTCAATCATGTCC
AAAAAGATGCTCTCAAAACTATGGTCAAATAAAGAAAGACAAAGTGAGAATAGTAGCTCA
GATACATCAGAAAGCCCATCATCTTCTAATGCAGGGGAAACAAAGTCTACCTCATGTAGA
AGTGGGAGGCATTCCCTCTCTTAG