Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038529
CDS Infomation

pacid=37459295 polypeptide=PGSC0003DMP400026184 locus=PGSC0003DMG400014872 ID=PGSC0003DMT400038529.v4.03 annot-version=v4.03
Sequence

ATGGACTCAAGCAACCCAAAGGTCATCACATGCAAAGCTGCAGTAGTATGGAAGGAAGGG
GAGATGATAAAGATCGAAGAGATACAAGTGGATCCACCTAAATCAAATGAAGTTCGAATT
AAGATGCTCTTTGCCAGTTTGTGCCACACTGACATTCTTGCTTCCAATGGTTATCCCTAT
CCTTTATTTCCTCGAGTTCTTGGACATGAAGGAGTTGGAATGTCAATTCATGGAGGACAA
GTATTATACCAAATTTTTACTTGCGCCACGTTGTCGGAATATACAGTTGTTAATGCCAAC
TACGTAATCAAGGTTGATCCTCAGAAGATTCCGCTTCAACATGCTAGCTTGCTTTGTTGT
GGATTTACAACAGGTTATGGAGCAACATTCAGAGAAGTTCATGTTGAAAAGGGCTCAACT
GTTGCTGTACTAGGTCTTGGTGCTGTTGGACTTGGAGCGATTGAGGGAGCTCGAAGTCAA
GGGGCATCGAAAATAATTGGTGTTGATATAAACGAATTGAAACAAGGAAAAGGAAAAGTG
TTTGGAATGACGGACTTCATTAACCCTAAAGAATCCAGGACATCAGTTTCCGAGATGATA
AAAGATGTTACTGAAGGCATAGGTGTTGATTATGTTTTCGAATGTACTGGGATACCATCC
ATGCTTAATGAAGCCATTGAAGCCTCAAAATTGGGAATTGGGACAATTGTTGTAATTGGT
GCAGGACATGGACTTACTAGGGAATTCAACTTAGTTTCCTTATTATGTGGTCGAACATTG
AAAGGTTCAGTCTATGGTGGAATAAGACTTCACTCAGATCTTCCTGCTCTACTTCATAGA
TGCGCAAATAAGGAGATTCAACTAGATGAGCTTATAACTCATCAAGTTTCGTTGACTGAA
ATCAACCAATCATTTGAGTTATTGAAAGATCCACATTGTGTCAAGATTATTATCAAGTTC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400026184
PEP Infomation

pacid=37459295 transcript=PGSC0003DMT400038529 locus=PGSC0003DMG400014872 ID=PGSC0003DMT400038529.v4.03 annot-version=v4.03
Sequence

MDSSNPKVITCKAAVVWKEGEMIKIEEIQVDPPKSNEVRIKMLFASLCHTDILASNGYPY
PLFPRVLGHEGVGMSIHGGQVLYQIFTCATLSEYTVVNANYVIKVDPQKIPLQHASLLCC
GFTTGYGATFREVHVEKGSTVAVLGLGAVGLGAIEGARSQGASKIIGVDINELKQGKGKV
FGMTDFINPKESRTSVSEMIKDVTEGIGVDYVFECTGIPSMLNEAIEASKLGIGTIVVIG
AGHGLTREFNLVSLLCGRTLKGSVYGGIRLHSDLPALLHRCANKEIQLDELITHQVSLTE
INQSFELLKDPHCVKIIIKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400038529
Transcript Infomation

pacid=37459295 locus=PGSC0003DMG400014872 ID=PGSC0003DMT400038529.v4.03 annot-version=v4.03
Sequence

ATGGACTCAAGCAACCCAAAGGTCATCACATGCAAAGCTGCAGTAGTATGGAAGGAAGGG
GAGATGATAAAGATCGAAGAGATACAAGTGGATCCACCTAAATCAAATGAAGTTCGAATT
AAGATGCTCTTTGCCAGTTTGTGCCACACTGACATTCTTGCTTCCAATGGTTATCCCTAT
CCTTTATTTCCTCGAGTTCTTGGACATGAAGGAGTTGGAATGTCAATTCATGGAGGACAA
GTATTATACCAAATTTTTACTTGCGCCACGTTGTCGGAATATACAGTTGTTAATGCCAAC
TACGTAATCAAGGTTGATCCTCAGAAGATTCCGCTTCAACATGCTAGCTTGCTTTGTTGT
GGATTTACAACAGGTTATGGAGCAACATTCAGAGAAGTTCATGTTGAAAAGGGCTCAACT
GTTGCTGTACTAGGTCTTGGTGCTGTTGGACTTGGAGCGATTGAGGGAGCTCGAAGTCAA
GGGGCATCGAAAATAATTGGTGTTGATATAAACGAATTGAAACAAGGAAAAGGAAAAGTG
TTTGGAATGACGGACTTCATTAACCCTAAAGAATCCAGGACATCAGTTTCCGAGATGATA
AAAGATGTTACTGAAGGCATAGGTGTTGATTATGTTTTCGAATGTACTGGGATACCATCC
ATGCTTAATGAAGCCATTGAAGCCTCAAAATTGGGAATTGGGACAATTGTTGTAATTGGT
GCAGGACATGGACTTACTAGGGAATTCAACTTAGTTTCCTTATTATGTGGTCGAACATTG
AAAGGTTCAGTCTATGGTGGAATAAGACTTCACTCAGATCTTCCTGCTCTACTTCATAGA
TGCGCAAATAAGGAGATTCAACTAGATGAGCTTATAACTCATCAAGTTTCGTTGACTGAA
ATCAACCAATCATTTGAGTTATTGAAAGATCCACATTGTGTCAAGATTATTATCAAGTTC
TAA