Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038487
CDS Infomation

pacid=37470159 polypeptide=PGSC0003DMP400026153 locus=PGSC0003DMG400014854 ID=PGSC0003DMT400038487.v4.03 annot-version=v4.03
Sequence

ATGGCATCATCAATGAGGCTCATTTTCTTCACTTTATTGGTTTTTATTGCACTGATATTT
ACACAGATCAAAGCTGAAGCTGAGGTTAAATCTGTGGATGATGAAGTGGAAGTGGTTAAA
TCCCATGTTTCCACTTCTGCAGAGTTGGACCATCTTAAGTCCAAGATCCAATCTTTGGAA
TCAAATGTGAAGGACGCTGCCACAGAACTGAAACAGAAGGATGAAGTCATTGCTGGCAAG
GAGGAAATGATAAAAGAGAAATCAGAGTCAATTGCTTCATTGCTAGCCCAAATATCTTCT
CTCCAAGAAAAAGGTTCATTGGATGCTGAGGAGAAAGTTAAAAAGGCTCATGCCCGAGTT
GATCAATTAGAAAAGCAAGTTGAGACACTAAAAAAGGAAGTTGATATGAAGAATAAGGAG
AAAAAAGATTTGGGAACCCAGATAAATGAAGCAGAGCAGAGAGTAACTGAATTAAATTCA
AAGGTTGAGAAGCTTCAAAAGACCGTTGATGAGCAGGAGGCAAAATTAAGAAAAACTGAA
CGGGCTCTTCAGATTGCTGAGGAGGAAATGATTAGAGCTAGATCTGAAGCCACGTCAAAA
GCTCAGCAGCTTGGAGAGGTGCATGGTGCATGGCTACCACCTTGGCTTGCAGTTCAGTTG
ACTCATTTCCAGTTTCTTTTGGAGAAGCATGGAAAACCTGCTATGGACATAGTGATACAA
AAGGCTACTGAAAAGAAGGCCCTAGCTGAAACATGGGCTGCACCACATGTGGAAACAATC
AAAACACAATGGATACCAGTTGCGAAGGAAAAGTGGTTGGTGATTTCCACTACTGCTGAG
CCACATGTACAATTGTTAACTACAAGAGCTCTTGAAATTTACGAGACATCTAAAGGCGCC
ATAACTCCACATATTCTCAAGGTTCAAGAACTAGCTACTCCTCATGTTCAGGAAATTAAG
AAATTCAGCAAGCCATACATTGATGATGTCGCTGCTGCTGCAAAACCACATGTTGAAAAA
GTTCGTGTTGCTGCCAAGCCATACACAGAGGTGGCAGTTCATCATTATGGGAAGTTCCTT
GAGTCTGCAACTACATACCATAATCAGCTACAAGGCACAGTCAAAGAAACACTGGAGAAT
CATGACCTTACAAAGTCTCTCGCAACAAAGGAGCTGATTTGGTTTGCTGCCTCAGCATTG
TTGGCTTTGCCCATTATAATTCTGTTCAAATTCTTATCTGCCATCTTCTGTACAAAGGCA
AAGGAATCTGATCACAGTGTTAATTCACCCAATTCACGCCGTAAGGCCAAGAGGGGACAT
CCGGACATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400026153
PEP Infomation

pacid=37470159 transcript=PGSC0003DMT400038487 locus=PGSC0003DMG400014854 ID=PGSC0003DMT400038487.v4.03 annot-version=v4.03
Sequence

MASSMRLIFFTLLVFIALIFTQIKAEAEVKSVDDEVEVVKSHVSTSAELDHLKSKIQSLE
SNVKDAATELKQKDEVIAGKEEMIKEKSESIASLLAQISSLQEKGSLDAEEKVKKAHARV
DQLEKQVETLKKEVDMKNKEKKDLGTQINEAEQRVTELNSKVEKLQKTVDEQEAKLRKTE
RALQIAEEEMIRARSEATSKAQQLGEVHGAWLPPWLAVQLTHFQFLLEKHGKPAMDIVIQ
KATEKKALAETWAAPHVETIKTQWIPVAKEKWLVISTTAEPHVQLLTTRALEIYETSKGA
ITPHILKVQELATPHVQEIKKFSKPYIDDVAAAAKPHVEKVRVAAKPYTEVAVHHYGKFL
ESATTYHNQLQGTVKETLENHDLTKSLATKELIWFAASALLALPIIILFKFLSAIFCTKA
KESDHSVNSPNSRRKAKRGHPDM*

Transcript Sequence

Transcript ID

PGSC0003DMT400038487
Transcript Infomation

pacid=37470159 locus=PGSC0003DMG400014854 ID=PGSC0003DMT400038487.v4.03 annot-version=v4.03
Sequence

ATGGCATCATCAATGAGGCTCATTTTCTTCACTTTATTGGTTTTTATTGCACTGATATTT
ACACAGATCAAAGCTGAAGCTGAGGTTAAATCTGTGGATGATGAAGTGGAAGTGGTTAAA
TCCCATGTTTCCACTTCTGCAGAGTTGGACCATCTTAAGTCCAAGATCCAATCTTTGGAA
TCAAATGTGAAGGACGCTGCCACAGAACTGAAACAGAAGGATGAAGTCATTGCTGGCAAG
GAGGAAATGATAAAAGAGAAATCAGAGTCAATTGCTTCATTGCTAGCCCAAATATCTTCT
CTCCAAGAAAAAGGTTCATTGGATGCTGAGGAGAAAGTTAAAAAGGCTCATGCCCGAGTT
GATCAATTAGAAAAGCAAGTTGAGACACTAAAAAAGGAAGTTGATATGAAGAATAAGGAG
AAAAAAGATTTGGGAACCCAGATAAATGAAGCAGAGCAGAGAGTAACTGAATTAAATTCA
AAGGTTGAGAAGCTTCAAAAGACCGTTGATGAGCAGGAGGCAAAATTAAGAAAAACTGAA
CGGGCTCTTCAGATTGCTGAGGAGGAAATGATTAGAGCTAGATCTGAAGCCACGTCAAAA
GCTCAGCAGCTTGGAGAGGTGCATGGTGCATGGCTACCACCTTGGCTTGCAGTTCAGTTG
ACTCATTTCCAGTTTCTTTTGGAGAAGCATGGAAAACCTGCTATGGACATAGTGATACAA
AAGGCTACTGAAAAGAAGGCCCTAGCTGAAACATGGGCTGCACCACATGTGGAAACAATC
AAAACACAATGGATACCAGTTGCGAAGGAAAAGTGGTTGGTGATTTCCACTACTGCTGAG
CCACATGTACAATTGTTAACTACAAGAGCTCTTGAAATTTACGAGACATCTAAAGGCGCC
ATAACTCCACATATTCTCAAGGTTCAAGAACTAGCTACTCCTCATGTTCAGGAAATTAAG
AAATTCAGCAAGCCATACATTGATGATGTCGCTGCTGCTGCAAAACCACATGTTGAAAAA
GTTCGTGTTGCTGCCAAGCCATACACAGAGGTGGCAGTTCATCATTATGGGAAGTTCCTT
GAGTCTGCAACTACATACCATAATCAGCTACAAGGCACAGTCAAAGAAACACTGGAGAAT
CATGACCTTACAAAGTCTCTCGCAACAAAGGAGCTGATTTGGTTTGCTGCCTCAGCATTG
TTGGCTTTGCCCATTATAATTCTGTTCAAATTCTTATCTGCCATCTTCTGTACAAAGGCA
AAGGAATCTGATCACAGTGTTAATTCACCCAATTCACGCCGTAAGGCCAAGAGGGGACAT
CCGGACATGTAG