Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038444
CDS Infomation

pacid=37468618 polypeptide=PGSC0003DMP400026122 locus=PGSC0003DMG400014838 ID=PGSC0003DMT400038444.v4.03 annot-version=v4.03
Sequence

ATGTCTCTTGTTCTTGCCAAAGGGTCTTGTAATTCGAAGCTTCTTTGGGAATTTCTCAAA
AGAATGTCGAGAAGAGGGCTTTTGACGACACCAACTGTTACGTGTTTGATAAAATGCCTA
GGAGAAGAAGGGTTGGTAAATGAAGCATTGACTACTTTCTACAGAATGAAGCAATTTCAC
TGTAAGCCTGATGTTTATGCTTACAACACACTCATATTTGCTCTTTGTAGAGTTGGGAAT
TTCAAAAAAGCCAAGTTCTTGATGGAGCAAATGGAGTTGCCTGGTTTTAGGTGTCCACCT
GATGTCTTTACTTACACAATATTGATTAGCTCTTATTGTAGATATGGTATGGAAACTGGC
TGTAGAAAAGCTATTAGACGGAGAATGTGGGAGGCGAATCACTTGTTTCGCATCATGCTA
TTCAAAGGATTTGTTCCTGATGTAGTAACTTATAATAGTTTGATCAATGGATGCTGCAAA
ACTAATAGGATAGAGAGAGCATTGGAGTTGTTGGATGATATGGTGAAAAGAGGGGTTGTG
CCTAATCGAATTACGTATAATTCTTTCATTAGGTATTATAGTGTTACAAATGAGATTGAT
AAGGCTATTGAAATGCTGAGAAGAATGCAAGGAATGAATCATGGAGTAGTACTACCATGT
AACAGTTCGTATACACCGATAATTCATGCTATGTGTGAAACTGGTAGGGTGGTGGAGGCA
AGAGATCTTCTTGTCGAATTGGCTGAACAAGGTTCGATTCCAAGAGAATATACTTATAAA
CTAGTTCGTGATGCTTTAGAATCTTCTGGGAAGATTGATTTGCTTGATGAACAATTGTGT
ACAAGATTAGAAGATGGTATTAAAGGTAGGATTAGACAAGTGATGAAAGTAAAACCTTTG
TTGCAGCATCAAAGTGTTTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400026122
PEP Infomation

pacid=37468618 transcript=PGSC0003DMT400038444 locus=PGSC0003DMG400014838 ID=PGSC0003DMT400038444.v4.03 annot-version=v4.03
Sequence

MSLVLAKGSCNSKLLWEFLKRMSRRGLLTTPTVTCLIKCLGEEGLVNEALTTFYRMKQFH
CKPDVYAYNTLIFALCRVGNFKKAKFLMEQMELPGFRCPPDVFTYTILISSYCRYGMETG
CRKAIRRRMWEANHLFRIMLFKGFVPDVVTYNSLINGCCKTNRIERALELLDDMVKRGVV
PNRITYNSFIRYYSVTNEIDKAIEMLRRMQGMNHGVVLPCNSSYTPIIHAMCETGRVVEA
RDLLVELAEQGSIPREYTYKLVRDALESSGKIDLLDEQLCTRLEDGIKGRIRQVMKVKPL
LQHQSVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400038444
Transcript Infomation

pacid=37468618 locus=PGSC0003DMG400014838 ID=PGSC0003DMT400038444.v4.03 annot-version=v4.03
Sequence

ATGTCTCTTGTTCTTGCCAAAGGGTCTTGTAATTCGAAGCTTCTTTGGGAATTTCTCAAA
AGAATGTCGAGAAGAGGGCTTTTGACGACACCAACTGTTACGTGTTTGATAAAATGCCTA
GGAGAAGAAGGGTTGGTAAATGAAGCATTGACTACTTTCTACAGAATGAAGCAATTTCAC
TGTAAGCCTGATGTTTATGCTTACAACACACTCATATTTGCTCTTTGTAGAGTTGGGAAT
TTCAAAAAAGCCAAGTTCTTGATGGAGCAAATGGAGTTGCCTGGTTTTAGGTGTCCACCT
GATGTCTTTACTTACACAATATTGATTAGCTCTTATTGTAGATATGGTATGGAAACTGGC
TGTAGAAAAGCTATTAGACGGAGAATGTGGGAGGCGAATCACTTGTTTCGCATCATGCTA
TTCAAAGGATTTGTTCCTGATGTAGTAACTTATAATAGTTTGATCAATGGATGCTGCAAA
ACTAATAGGATAGAGAGAGCATTGGAGTTGTTGGATGATATGGTGAAAAGAGGGGTTGTG
CCTAATCGAATTACGTATAATTCTTTCATTAGGTATTATAGTGTTACAAATGAGATTGAT
AAGGCTATTGAAATGCTGAGAAGAATGCAAGGAATGAATCATGGAGTAGTACTACCATGT
AACAGTTCGTATACACCGATAATTCATGCTATGTGTGAAACTGGTAGGGTGGTGGAGGCA
AGAGATCTTCTTGTCGAATTGGCTGAACAAGGTTCGATTCCAAGAGAATATACTTATAAA
CTAGTTCGTGATGCTTTAGAATCTTCTGGGAAGATTGATTTGCTTGATGAACAATTGTGT
ACAAGATTAGAAGATGGTATTAAAGGTAGGATTAGACAAGTGATGAAAGTAAAACCTTTG
TTGCAGCATCAAAGTGTTTCATAA