Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038402
CDS Infomation

pacid=37459475 polypeptide=PGSC0003DMP400026084 locus=PGSC0003DMG400014822 ID=PGSC0003DMT400038402.v4.03 annot-version=v4.03
Sequence

ATGAGAAGTTATCAGGCAATGCTTAACAATGGTGAAACCCTACCGATTATCGGTATGGGT
ACTTATTCAGGCGAAAACGATAGAGAAACAACTGAGAAAGCCATTAGAACCGCCATCAAG
ATGGGGTACAGACATTTTGATACGGCAAAAATATACGGTTCGGAGTTGGCTTTGGGAAAT
GCATTAAGACGAGCAATTCATGATGGATTGATCGAAAGGGAAGACATTCATGTCACTTCT
AAACTTTGGTCAAGTGATCATCATGATCCTGTTTCTGCTCTTCAACAAACTCTACAGCGG
CTAGGAATGGAATACATAGACATGTATTTGGTGCATTGGCCAGTGGCTTTGAAGGCATGG
GTGGATTATCCTGTTCCAGCAGAAGAAGACTTTGAGGAATTGGACATGGAAAATACTTGG
TCTGGCATGGAGAGGTGCTTAGAAATGGGATTGTGCAAGTCCATTGGAGTAAGCAACTTC
TCATCTAGAAAGATTGAAGAACTCATAGACTTTGCTTGTGTCACTCCTGTTGTCAATCAG
GTAGAAATGCATCCAATGTGGAGACAAAGAAAGCTAAGATCAATATGTGGGGATTATGGA
ATTCATGTAAGTGCATATTCACCTCTTGGTGGTCCTGGAAATGCTTGGGGAACTACTGCT
GTGGTTGATCATCCAATTATACAATCCATTGCTCACAAACATAACGCAACTCCAGCTCAG
GTGGCGTTACGATGGGGGTTGTCCCAGGGATCAAGCGTTATAGTAAAGAGTTTCAATCCA
CGGAGAATGAAGGAGAATATTGGAGCTCTTGATTTAACATTGGACGATTGGGATTTATTT
GAGATTGAGAAAATGGAAGAAAGAAAGATTATGAGGGCTGAATATCTAATTAATGATACT
ACAAGTCCATACAAGACCATTGAGGAACTTTGGGATGATGAGATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400026084
PEP Infomation

pacid=37459475 transcript=PGSC0003DMT400038402 locus=PGSC0003DMG400014822 ID=PGSC0003DMT400038402.v4.03 annot-version=v4.03
Sequence

MRSYQAMLNNGETLPIIGMGTYSGENDRETTEKAIRTAIKMGYRHFDTAKIYGSELALGN
ALRRAIHDGLIEREDIHVTSKLWSSDHHDPVSALQQTLQRLGMEYIDMYLVHWPVALKAW
VDYPVPAEEDFEELDMENTWSGMERCLEMGLCKSIGVSNFSSRKIEELIDFACVTPVVNQ
VEMHPMWRQRKLRSICGDYGIHVSAYSPLGGPGNAWGTTAVVDHPIIQSIAHKHNATPAQ
VALRWGLSQGSSVIVKSFNPRRMKENIGALDLTLDDWDLFEIEKMEERKIMRAEYLINDT
TSPYKTIEELWDDEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400038402
Transcript Infomation

pacid=37459475 locus=PGSC0003DMG400014822 ID=PGSC0003DMT400038402.v4.03 annot-version=v4.03
Sequence

ATGAGAAGTTATCAGGCAATGCTTAACAATGGTGAAACCCTACCGATTATCGGTATGGGT
ACTTATTCAGGCGAAAACGATAGAGAAACAACTGAGAAAGCCATTAGAACCGCCATCAAG
ATGGGGTACAGACATTTTGATACGGCAAAAATATACGGTTCGGAGTTGGCTTTGGGAAAT
GCATTAAGACGAGCAATTCATGATGGATTGATCGAAAGGGAAGACATTCATGTCACTTCT
AAACTTTGGTCAAGTGATCATCATGATCCTGTTTCTGCTCTTCAACAAACTCTACAGCGG
CTAGGAATGGAATACATAGACATGTATTTGGTGCATTGGCCAGTGGCTTTGAAGGCATGG
GTGGATTATCCTGTTCCAGCAGAAGAAGACTTTGAGGAATTGGACATGGAAAATACTTGG
TCTGGCATGGAGAGGTGCTTAGAAATGGGATTGTGCAAGTCCATTGGAGTAAGCAACTTC
TCATCTAGAAAGATTGAAGAACTCATAGACTTTGCTTGTGTCACTCCTGTTGTCAATCAG
GTAGAAATGCATCCAATGTGGAGACAAAGAAAGCTAAGATCAATATGTGGGGATTATGGA
ATTCATGTAAGTGCATATTCACCTCTTGGTGGTCCTGGAAATGCTTGGGGAACTACTGCT
GTGGTTGATCATCCAATTATACAATCCATTGCTCACAAACATAACGCAACTCCAGCTCAG
GTGGCGTTACGATGGGGGTTGTCCCAGGGATCAAGCGTTATAGTAAAGAGTTTCAATCCA
CGGAGAATGAAGGAGAATATTGGAGCTCTTGATTTAACATTGGACGATTGGGATTTATTT
GAGATTGAGAAAATGGAAGAAAGAAAGATTATGAGGGCTGAATATCTAATTAATGATACT
ACAAGTCCATACAAGACCATTGAGGAACTTTGGGATGATGAGATTTAA