Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038368
CDS Infomation

pacid=37469634 polypeptide=PGSC0003DMP400026058 locus=PGSC0003DMG400014804 ID=PGSC0003DMT400038368.v4.03 annot-version=v4.03
Sequence

ATGGAGTCAAACTGGGTTGAAGTGTTAGATAATGACCGTAGGACAGCTGACGTCGACTCA
AAAAGTAAAGTAGCATCTCAGTACGTGGCACGTATAGTTGGAGCTGGCACTGAGAAGCTG
GAGGAGCTATCATTTCAACCAAATTGTAGCTCATTTTATAGCAAGCTTGGTAAGAGGAAA
AGGACTGTAGAAGGTGAATCTAATTGCAGATCACATCTCAGGAAATCGACACTTAAGAAC
TACTCAAATTTCATTAAAAGTGGATTGCCACAACGTGTTTTATATCATCAGAATGGTGAA
TGGAATGATTTCCCTCAAGATATTGTTCGTATAGTCAAAGAAGATTTTCGTGCAAAGAAG
GCTGTGATTGAGGTGAACTTTGGTGGCTTTCATGTAATACTTGATATTCTATATATGGTT
CAGGTAAATTTGGTTACTGGATTAGAGAAACCCATCGCCTGGATAGACGAAGCAGGTGGC
TGTTTCTTCCCTGATTTATGTCTCCTCAGTTGTAAAATGCATGACAACTTTGAAATCCAA
TCGCAGAGAACTGAAGAATTCAGTGCTGCTGAGCCGGATAGGGCAACTAACATCAAGTTG
CATCTTGAAATAGATTTTAATGGACCGAATAATTGCAAAGTGGATGAAGGTGTGGAAGAG
TCAAATGTCCGTGTTAAAAGGATTAAAGTCGATCCTTTAAAAGATAATCAACAATTTGCT
GTTGATCAAAAATCATATGTGGCAGAAAATCAACAGGATCAGGAAAGTCTGTCTCCTATA
TTAGAGGATACACTTAAGTTGGTGGATGCAGAATCTGTTAAAACTATGTTTGTTAAGGGA
ATGAATACCATCTGTATGGTGGATATAGTCAAAATTAGTCAATGCTTAAGTAAATATATG
AGAAATCGCTTGGAACTGTTTGAGAAGCAGGTTGAGATAACCCAAAAGTATCGTGGGAAC
TCCAATGTTCGGTATGCTTGGCTTGCCGCTTCCAAAGAGGTAGTATCTACAATTATGAAC
TATGGCCTTATGCATGGGGCACGTGGACAGAAGACTAATCTTGGCGTCGGAGTGCACCTC
ATTGCCCAGGACTGTGCCTCTAAAAGTGCCGCTAGCTGTGATATTGACGAAAATGGCATC
CGTTACATGGTTCTTTGTCGTGTCATTTTGGGCAATGAAGAACTTTTGCATTTTGGCTCT
GAGCAATCTTACCCAAGCAATGAGAAATATGATAGTGGTGTTGATGATCTGGAGAGTCCT
ACTTACTATACTGTTTGGAACATGAATATGAACACACACATATATCCCGAATATGTTGTG
AGCTTCAGGATGTCTTCAGGAGCAGAAGGGGCTCCAATAAAGGAAGAAAGTCGGCTTGAT
GTCTCCAGAGTTACTTCTCAGGGATCTGAGGAGCAGTTGGACTTGAATAAATTGCCTACA
GAATTGGGGAATTGTCAATTTGTAAGAAACATACAGCAATCCCGTGGTGTTGGTGTGGGT
ACAAATAAATCCCCTAAATCCCCCTGGATGCCTTTCTCTATGTTATTCGGAGCTATTTCA
GCTAAAGTGTCTCCAAAAGATTTGAAATTGGTTCATGCACATTATGACTTGTTCAGGAGC
AAGAAAATTTCCCGGAACGATTTCATTAGAAGGCTGAGGTTGATAGTGGGTGATCAGTTA
TTGAAGTCTACCATAACCAATCTCCAGTGTAAGCCGCCTTCCGCGTCTCCATGCTTTATG
AATGTGCCGAGTGGGGAGAGTAATTGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400026058
PEP Infomation

pacid=37469634 transcript=PGSC0003DMT400038368 locus=PGSC0003DMG400014804 ID=PGSC0003DMT400038368.v4.03 annot-version=v4.03
Sequence

MESNWVEVLDNDRRTADVDSKSKVASQYVARIVGAGTEKLEELSFQPNCSSFYSKLGKRK
RTVEGESNCRSHLRKSTLKNYSNFIKSGLPQRVLYHQNGEWNDFPQDIVRIVKEDFRAKK
AVIEVNFGGFHVILDILYMVQVNLVTGLEKPIAWIDEAGGCFFPDLCLLSCKMHDNFEIQ
SQRTEEFSAAEPDRATNIKLHLEIDFNGPNNCKVDEGVEESNVRVKRIKVDPLKDNQQFA
VDQKSYVAENQQDQESLSPILEDTLKLVDAESVKTMFVKGMNTICMVDIVKISQCLSKYM
RNRLELFEKQVEITQKYRGNSNVRYAWLAASKEVVSTIMNYGLMHGARGQKTNLGVGVHL
IAQDCASKSAASCDIDENGIRYMVLCRVILGNEELLHFGSEQSYPSNEKYDSGVDDLESP
TYYTVWNMNMNTHIYPEYVVSFRMSSGAEGAPIKEESRLDVSRVTSQGSEEQLDLNKLPT
ELGNCQFVRNIQQSRGVGVGTNKSPKSPWMPFSMLFGAISAKVSPKDLKLVHAHYDLFRS
KKISRNDFIRRLRLIVGDQLLKSTITNLQCKPPSASPCFMNVPSGESNC*

Transcript Sequence

Transcript ID

PGSC0003DMT400038368
Transcript Infomation

pacid=37469634 locus=PGSC0003DMG400014804 ID=PGSC0003DMT400038368.v4.03 annot-version=v4.03
Sequence

ATGGAGTCAAACTGGGTTGAAGTGTTAGATAATGACCGTAGGACAGCTGACGTCGACTCA
AAAAGTAAAGTAGCATCTCAGTACGTGGCACGTATAGTTGGAGCTGGCACTGAGAAGCTG
GAGGAGCTATCATTTCAACCAAATTGTAGCTCATTTTATAGCAAGCTTGGTAAGAGGAAA
AGGACTGTAGAAGGTGAATCTAATTGCAGATCACATCTCAGGAAATCGACACTTAAGAAC
TACTCAAATTTCATTAAAAGTGGATTGCCACAACGTGTTTTATATCATCAGAATGGTGAA
TGGAATGATTTCCCTCAAGATATTGTTCGTATAGTCAAAGAAGATTTTCGTGCAAAGAAG
GCTGTGATTGAGGTGAACTTTGGTGGCTTTCATGTAATACTTGATATTCTATATATGGTT
CAGGTAAATTTGGTTACTGGATTAGAGAAACCCATCGCCTGGATAGACGAAGCAGGTGGC
TGTTTCTTCCCTGATTTATGTCTCCTCAGTTGTAAAATGCATGACAACTTTGAAATCCAA
TCGCAGAGAACTGAAGAATTCAGTGCTGCTGAGCCGGATAGGGCAACTAACATCAAGTTG
CATCTTGAAATAGATTTTAATGGACCGAATAATTGCAAAGTGGATGAAGGTGTGGAAGAG
TCAAATGTCCGTGTTAAAAGGATTAAAGTCGATCCTTTAAAAGATAATCAACAATTTGCT
GTTGATCAAAAATCATATGTGGCAGAAAATCAACAGGATCAGGAAAGTCTGTCTCCTATA
TTAGAGGATACACTTAAGTTGGTGGATGCAGAATCTGTTAAAACTATGTTTGTTAAGGGA
ATGAATACCATCTGTATGGTGGATATAGTCAAAATTAGTCAATGCTTAAGTAAATATATG
AGAAATCGCTTGGAACTGTTTGAGAAGCAGGTTGAGATAACCCAAAAGTATCGTGGGAAC
TCCAATGTTCGGTATGCTTGGCTTGCCGCTTCCAAAGAGGTAGTATCTACAATTATGAAC
TATGGCCTTATGCATGGGGCACGTGGACAGAAGACTAATCTTGGCGTCGGAGTGCACCTC
ATTGCCCAGGACTGTGCCTCTAAAAGTGCCGCTAGCTGTGATATTGACGAAAATGGCATC
CGTTACATGGTTCTTTGTCGTGTCATTTTGGGCAATGAAGAACTTTTGCATTTTGGCTCT
GAGCAATCTTACCCAAGCAATGAGAAATATGATAGTGGTGTTGATGATCTGGAGAGTCCT
ACTTACTATACTGTTTGGAACATGAATATGAACACACACATATATCCCGAATATGTTGTG
AGCTTCAGGATGTCTTCAGGAGCAGAAGGGGCTCCAATAAAGGAAGAAAGTCGGCTTGAT
GTCTCCAGAGTTACTTCTCAGGGATCTGAGGAGCAGTTGGACTTGAATAAATTGCCTACA
GAATTGGGGAATTGTCAATTTGTAAGAAACATACAGCAATCCCGTGGTGTTGGTGTGGGT
ACAAATAAATCCCCTAAATCCCCCTGGATGCCTTTCTCTATGTTATTCGGAGCTATTTCA
GCTAAAGTGTCTCCAAAAGATTTGAAATTGGTTCATGCACATTATGACTTGTTCAGGAGC
AAGAAAATTTCCCGGAACGATTTCATTAGAAGGCTGAGGTTGATAGTGGGTGATCAGTTA
TTGAAGTCTACCATAACCAATCTCCAGTGTAAGCCGCCTTCCGCGTCTCCATGCTTTATG
AATGTGCCGAGTGGGGAGAGTAATTGTTGA