Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038197
CDS Infomation

pacid=37438532 polypeptide=PGSC0003DMP400025952 locus=PGSC0003DMG400014733 ID=PGSC0003DMT400038197.v4.03 annot-version=v4.03
Sequence

ATGGAAGATGTTGAAGTTCCAGATTATTTCCTTTGTCCAATATCAATGCAACTAATGAGG
GATCCGGTTACAACATCAACCGGAATAACCTATGATAGGGAGAACATAGAGAAATGGCTA
TTCAAGTGCAAGAACACAACTTGTCCCATAACCAAACAAGAGTTGTTGACCATGGATCTC
ACCCCAAACCACACTCTCCGTCGTGTGATCCAATCTTGGTGCATCATGAATTCTTCCCAT
GGTGTTGAAAGGATTCCTACTCCAAAGTCTCAAGTAACAAAATCATATGTTTTAAAACTC
CTTAAACAAGCCATGCAATCCCAAGAAATGCAACTTTCTTGCTTGAGGAAACTTAAATCT
ATTGTTCATGCAAGTGAGAGCAACAAGAAATGTTTAGAATCATGTGAGGTTGTAGATTTC
TTAGCTTCAATTATAATGAAGCAAGAAATGACTTTTATTCAAGATTCAGAGTTCAGGATC
AGTGGCAGAGACACCCTTTTACAAAAAGTCGTGCCATCTGACATTGTTTCACCAAAAGAT
TCCGAATCATACAAGTTGAGTTGTGATAATAGTCAGACACCACTTGTACTCGAGTACTTC
ACTACTAAGACAAGTGATGAAGCTTTGGATATTCTTTTCCATCTTAATCCCTCCGATGAA
ACCCTAAAAAAGCTCATCTCCAAAGACAATGGAGACGAACTTTTCTTAGATTCTTTATTG
TATTTCTTGAAATGTGGGAATTACCAATCTCGAGACTATGCAATAATGCTATTAAAATCA
GCATTCAATGTGGCTGATCCATGCCAATTAATTGGTGCAAAACAAGAATATTTTAAAGAA
ATATTGTTATTTTTGAATAACAAACTAATCTCACAACAAGCTACAAAGGCTTCACTTAAA
TTACTAGTGGAACTTTGTCCATGGGGTAGAAATAGAATCAAAGCAATTGAAGTTGGAGCT
ATATCAACCCTAATTGAGCTTCTTATTGATACAATAGAAAGAAGATCTTGTGAATTAATC
CTTACAATTTTACACCAACTTTGTAGTTGCGCCGAGGGCCGGGCTGAGTTATTGAACCAT
GGGGCAGGAATAGCCATTATTTCCAAGAAAGTACTTAGGGTTTCACAAGTAGCAAGTGAT
AGAGGAGTGAGGATACTTTGTTCCATTTCAAAATTTTCAGCAACTTGTAAGGTTCTTCAA
GAGATGTTGCAAGTGGGAGTGGTGTCAAAGTTGTGTTTGGTGATTCAAGTGGATAGTTGT
TCAAAGACCAAGGAAAAAGCAAAAGAAATTCTAAGGTTACATTCTAGGGTTTGGAGAGAT
TCTTCTTGTCTGCCTCCTCAATTACTCTCTTCTTATCCTTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400025952
PEP Infomation

pacid=37438532 transcript=PGSC0003DMT400038197 locus=PGSC0003DMG400014733 ID=PGSC0003DMT400038197.v4.03 annot-version=v4.03
Sequence

MEDVEVPDYFLCPISMQLMRDPVTTSTGITYDRENIEKWLFKCKNTTCPITKQELLTMDL
TPNHTLRRVIQSWCIMNSSHGVERIPTPKSQVTKSYVLKLLKQAMQSQEMQLSCLRKLKS
IVHASESNKKCLESCEVVDFLASIIMKQEMTFIQDSEFRISGRDTLLQKVVPSDIVSPKD
SESYKLSCDNSQTPLVLEYFTTKTSDEALDILFHLNPSDETLKKLISKDNGDELFLDSLL
YFLKCGNYQSRDYAIMLLKSAFNVADPCQLIGAKQEYFKEILLFLNNKLISQQATKASLK
LLVELCPWGRNRIKAIEVGAISTLIELLIDTIERRSCELILTILHQLCSCAEGRAELLNH
GAGIAIISKKVLRVSQVASDRGVRILCSISKFSATCKVLQEMLQVGVVSKLCLVIQVDSC
SKTKEKAKEILRLHSRVWRDSSCLPPQLLSSYPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400038197
Transcript Infomation

pacid=37438532 locus=PGSC0003DMG400014733 ID=PGSC0003DMT400038197.v4.03 annot-version=v4.03
Sequence

ATGGAAGATGTTGAAGTTCCAGATTATTTCCTTTGTCCAATATCAATGCAACTAATGAGG
GATCCGGTTACAACATCAACCGGAATAACCTATGATAGGGAGAACATAGAGAAATGGCTA
TTCAAGTGCAAGAACACAACTTGTCCCATAACCAAACAAGAGTTGTTGACCATGGATCTC
ACCCCAAACCACACTCTCCGTCGTGTGATCCAATCTTGGTGCATCATGAATTCTTCCCAT
GGTGTTGAAAGGATTCCTACTCCAAAGTCTCAAGTAACAAAATCATATGTTTTAAAACTC
CTTAAACAAGCCATGCAATCCCAAGAAATGCAACTTTCTTGCTTGAGGAAACTTAAATCT
ATTGTTCATGCAAGTGAGAGCAACAAGAAATGTTTAGAATCATGTGAGGTTGTAGATTTC
TTAGCTTCAATTATAATGAAGCAAGAAATGACTTTTATTCAAGATTCAGAGTTCAGGATC
AGTGGCAGAGACACCCTTTTACAAAAAGTCGTGCCATCTGACATTGTTTCACCAAAAGAT
TCCGAATCATACAAGTTGAGTTGTGATAATAGTCAGACACCACTTGTACTCGAGTACTTC
ACTACTAAGACAAGTGATGAAGCTTTGGATATTCTTTTCCATCTTAATCCCTCCGATGAA
ACCCTAAAAAAGCTCATCTCCAAAGACAATGGAGACGAACTTTTCTTAGATTCTTTATTG
TATTTCTTGAAATGTGGGAATTACCAATCTCGAGACTATGCAATAATGCTATTAAAATCA
GCATTCAATGTGGCTGATCCATGCCAATTAATTGGTGCAAAACAAGAATATTTTAAAGAA
ATATTGTTATTTTTGAATAACAAACTAATCTCACAACAAGCTACAAAGGCTTCACTTAAA
TTACTAGTGGAACTTTGTCCATGGGGTAGAAATAGAATCAAAGCAATTGAAGTTGGAGCT
ATATCAACCCTAATTGAGCTTCTTATTGATACAATAGAAAGAAGATCTTGTGAATTAATC
CTTACAATTTTACACCAACTTTGTAGTTGCGCCGAGGGCCGGGCTGAGTTATTGAACCAT
GGGGCAGGAATAGCCATTATTTCCAAGAAAGTACTTAGGGTTTCACAAGTAGCAAGTGAT
AGAGGAGTGAGGATACTTTGTTCCATTTCAAAATTTTCAGCAACTTGTAAGGTTCTTCAA
GAGATGTTGCAAGTGGGAGTGGTGTCAAAGTTGTGTTTGGTGATTCAAGTGGATAGTTGT
TCAAAGACCAAGGAAAAAGCAAAAGAAATTCTAAGGTTACATTCTAGGGTTTGGAGAGAT
TCTTCTTGTCTGCCTCCTCAATTACTCTCTTCTTATCCTTCATAA