Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038175
CDS Infomation

pacid=37435187 polypeptide=PGSC0003DMP400025941 locus=PGSC0003DMG400014723 ID=PGSC0003DMT400038175.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGAAACATATCCCCTCATATAGCAAGCAAACACAAGGCCAAGGGACAACAACA
ACAACAAATGATCATCAACTAAGTTTAGTAACACAAGATGAAAGTTTGCTAACAAAATGT
TTCATAGGGAAGAGTATAATTGGTGGGCCTTCTTGGTTAGGGTTAATGAAGAAGGCTTTT
AGATCACCTATCAAAGAGAATGATATCAAAAGTATTAGAAGAAGGGAAGAAGCTCATGAC
CAAGAAGAAGAAGAAAAGAAGAGGGGGAAACGACGATGGATCTTCCGAAAACCTACTGTT
CACGAAACAACATTAATTCATCACAATCAAGATCAAGAAAATGCAGCTACAACAAGCAAA
GGAAATTTGGCTACAATTTTTTTGCCAAAAAATGCTGATTTGAAGCAAAAAGGAGCAATT
GGAGTAGCTATAACTAGGGGAGGATCTAGCTTATCAGCCGCTACAACTTCTACAATAGCC
ACTGATGTCGCAATTGCTAAAACACAAGCAACTATAGATATCACTCAGCTCACACAACCT
CCTATTTTAGTTAAACAACAATGTGCCATCCTTGTCATTCAGACAACATTCAGAGGGTAC
TTGGCAAGAAAAGCACTTGGAGCGCTCAAGGGTGTCGTGAAATTGCAAGCTTTAATAAGA
GGCCATAATGTTCGAAAACGAGCGCAAATTACACTCCAATGCATGCAATCTCTTGTTCGC
GTGCAAAATCAGGTGTGTGATCAACGTAGAAGGTTATCTTGTGAAGGAATTAGTTGTGAT
TCAATGTTCAAAGAGCCAAAAAGCATTTTGGAGCTTCATCTCAATGATAAGGAGTCCAAT
TCTATAAATCAAGCTAGTATTCCGGACAACGATGGTTATGATCATTTACATGCACTAGAA
AAAATTGAAGCTTTGTTACACAAAGCAAAGGTAGCTGCTAAAAAGCGCGAAAATACGCTT
GCTCATGCATTCTCTCGAAAGATGTGGACCTCGAATAAGGATGAAGATTCAAGTAGCAAT
ACAGAACTTGACGAGGATTTGAGAGTTTTTGACGTAATAGATGAAAAGAATCGCAAAAGT
ACTAGTAGAGCTTCATGCGATCAACCAAGAGATCGCATAAAGAACATTGAAATTGACACG
GCTTGTTCTTACTCTAACTCGGACACTGAGTTTTGGCGATTACACCATCAATACTATCAC
GACCATCAACAAAAGTTCTATTCATCGTATGTAGTCCCTTCTCCTCTCTCCCATAGAGCG
AATATCAACGCCTTGCCCATGACACCACCGTTAAAGATGAAAAATATCCAAGTTCACTCT
GCTAGTCCTCGCTACAGAAGGGAAGAGAACAACCATCACCGAATGGCTCTTCTCTCCCAT
AGAGCGAATGTTAACTCTTCACCTACAGCAGTTGATCAGCCAAGTTACATGGCAGCTACA
GCATCAGCTAGGGCGCGAGAACGGTCACAAAGCACTCCAAGACAGATACCGATGACTCCA
GAAAGAGAAAAAACAAGTTCAACAAAGAAACGTCTATCTTTCCCTATTCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400025941
PEP Infomation

pacid=37435187 transcript=PGSC0003DMT400038175 locus=PGSC0003DMG400014723 ID=PGSC0003DMT400038175.v4.03 annot-version=v4.03
Sequence

MKKKHIPSYSKQTQGQGTTTTTNDHQLSLVTQDESLLTKCFIGKSIIGGPSWLGLMKKAF
RSPIKENDIKSIRRREEAHDQEEEEKKRGKRRWIFRKPTVHETTLIHHNQDQENAATTSK
GNLATIFLPKNADLKQKGAIGVAITRGGSSLSAATTSTIATDVAIAKTQATIDITQLTQP
PILVKQQCAILVIQTTFRGYLARKALGALKGVVKLQALIRGHNVRKRAQITLQCMQSLVR
VQNQVCDQRRRLSCEGISCDSMFKEPKSILELHLNDKESNSINQASIPDNDGYDHLHALE
KIEALLHKAKVAAKKRENTLAHAFSRKMWTSNKDEDSSSNTELDEDLRVFDVIDEKNRKS
TSRASCDQPRDRIKNIEIDTACSYSNSDTEFWRLHHQYYHDHQQKFYSSYVVPSPLSHRA
NINALPMTPPLKMKNIQVHSASPRYRREENNHHRMALLSHRANVNSSPTAVDQPSYMAAT
ASARARERSQSTPRQIPMTPEREKTSSTKKRLSFPIQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400038175
Transcript Infomation

pacid=37435187 locus=PGSC0003DMG400014723 ID=PGSC0003DMT400038175.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGAAACATATCCCCTCATATAGCAAGCAAACACAAGGCCAAGGGACAACAACA
ACAACAAATGATCATCAACTAAGTTTAGTAACACAAGATGAAAGTTTGCTAACAAAATGT
TTCATAGGGAAGAGTATAATTGGTGGGCCTTCTTGGTTAGGGTTAATGAAGAAGGCTTTT
AGATCACCTATCAAAGAGAATGATATCAAAAGTATTAGAAGAAGGGAAGAAGCTCATGAC
CAAGAAGAAGAAGAAAAGAAGAGGGGGAAACGACGATGGATCTTCCGAAAACCTACTGTT
CACGAAACAACATTAATTCATCACAATCAAGATCAAGAAAATGCAGCTACAACAAGCAAA
GGAAATTTGGCTACAATTTTTTTGCCAAAAAATGCTGATTTGAAGCAAAAAGGAGCAATT
GGAGTAGCTATAACTAGGGGAGGATCTAGCTTATCAGCCGCTACAACTTCTACAATAGCC
ACTGATGTCGCAATTGCTAAAACACAAGCAACTATAGATATCACTCAGCTCACACAACCT
CCTATTTTAGTTAAACAACAATGTGCCATCCTTGTCATTCAGACAACATTCAGAGGGTAC
TTGGCAAGAAAAGCACTTGGAGCGCTCAAGGGTGTCGTGAAATTGCAAGCTTTAATAAGA
GGCCATAATGTTCGAAAACGAGCGCAAATTACACTCCAATGCATGCAATCTCTTGTTCGC
GTGCAAAATCAGGTGTGTGATCAACGTAGAAGGTTATCTTGTGAAGGAATTAGTTGTGAT
TCAATGTTCAAAGAGCCAAAAAGCATTTTGGAGCTTCATCTCAATGATAAGGAGTCCAAT
TCTATAAATCAAGCTAGTATTCCGGACAACGATGGTTATGATCATTTACATGCACTAGAA
AAAATTGAAGCTTTGTTACACAAAGCAAAGGTAGCTGCTAAAAAGCGCGAAAATACGCTT
GCTCATGCATTCTCTCGAAAGATGTGGACCTCGAATAAGGATGAAGATTCAAGTAGCAAT
ACAGAACTTGACGAGGATTTGAGAGTTTTTGACGTAATAGATGAAAAGAATCGCAAAAGT
ACTAGTAGAGCTTCATGCGATCAACCAAGAGATCGCATAAAGAACATTGAAATTGACACG
GCTTGTTCTTACTCTAACTCGGACACTGAGTTTTGGCGATTACACCATCAATACTATCAC
GACCATCAACAAAAGTTCTATTCATCGTATGTAGTCCCTTCTCCTCTCTCCCATAGAGCG
AATATCAACGCCTTGCCCATGACACCACCGTTAAAGATGAAAAATATCCAAGTTCACTCT
GCTAGTCCTCGCTACAGAAGGGAAGAGAACAACCATCACCGAATGGCTCTTCTCTCCCAT
AGAGCGAATGTTAACTCTTCACCTACAGCAGTTGATCAGCCAAGTTACATGGCAGCTACA
GCATCAGCTAGGGCGCGAGAACGGTCACAAAGCACTCCAAGACAGATACCGATGACTCCA
GAAAGAGAAAAAACAAGTTCAACAAAGAAACGTCTATCTTTCCCTATTCAATGA