Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038153
CDS Infomation

pacid=37453791 polypeptide=PGSC0003DMP400025927 locus=PGSC0003DMG400014714 ID=PGSC0003DMT400038153.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGAAGCTCAAAGCATTGCTCGGTTTCTTAACCCATTGGCTTTTCATATTCAG
AAATTGGGTCTTGAACTCAAATGCCCTCTTTGCTTAAACTTGCTGACTAAACCTATGTTG
CTTCCCTGCGACCATATTTTCTGCAACTTTTGTGTTCCGAGCTCGACCCAAGTTCAATGT
GAATGCCCTTTATGCAAACATCAATATGTTGATCAAGAAATAAGGGCAGTGCCTCATATG
GAGAGTATGATATCCATATTTAGAAGCTTAGATGCTACTTGCAATGCTAAAGTCTTTCAA
TTCCAATCTCCCGATGCTGGAAGATCACTCGAGCAGTCTCCCATTTCTGTTAATGCTGAC
AAATCAAGAAATGAGCAATCTGTCAAAGCCATAATAAGAAGCAATAATCCGAGCAAGGAG
ATTCATAGGCACAATGAACATGGAATGCCATGGAATGTTGTGAATCATTTGAGTGTCTTG
CCTTCGTCTGACAGGAAGGAAGACTCGAAAAATGATGGGTATAATGCAGAGGAAATAGAT
TTGAATCAATTTCAACAGCAGTCACCAGGCAGTGCTCATTCATCAGACAGCAACAAAGAC
ATTGTTAAAGAGACCAGTGAACTGAGAGTTATGAAAACCAATGCTGCAAAGAGGCTTGTT
GAAGATAGCTCAGATGTGGTTCCATTTCTGAAAAAAGAAGATAGCTCAGATGTGGTTGAA
GGTTTAATGCACCACACAGTTATGCATGAAAATGTGTTTCATGAAAGGGATGTGAAGAGA
CAAAAGAAACTAAGCTATGGATTGCCAGAGATGGCCTTGCAGAGTCATGATCATAATCAA
CAAAGAGAGTCTTGTTCAAGAATAATTGCCAACTCTGACTGCAACTTGACATGCAAATTG
AGTGAATCTTCTTTTGTTGCTCATCCACAAGAAGTTTCAGATCAACATCTTCTGGAAGGC
AGTGCTTGTGCTTTCTGCCTCAAATCTAAGATAACAGAGGGAACTGGACCAATGCTGCAC
TATGCAAATGGCAGGGAGGTGGTGGGAGATGCCACTTCACTTTCAAAAGCCATACCTGTG
CATATGAAATGTATTGACTGGGCGCCTCAAGTATATTATGATGGAGAGATCATAAAAAAT
TTGGAGGCTGAATTGGCAAGAGCTTCAAAACTCAAGTGTAGTGGTTGTGGCCTAAAGGGT
GCAGCACTTGGCTGCCTTGTGAAGTCTTGTCGGAGGAGTTACCATATGCCCTGTGCATTT
GAAATGCAGGACTGCCGTTGGGATACTGACAACTTTGTAATGCTGTGTCCAAGCCACAAA
TCAGTTAAATTTCCTAGCGAAAAGTCAAAGTCTAGGAAGCGTGCCAAAATTGAAGCACGT
CCAGAACCTGCTCCCATAACATCCGAGCGATTGAATTTTTGGGCAACATCGTCAGATGGA
CCAAAAGAATGGGTTCTATGCGGATCTGCTCTATCCTCAGAAGAGAAGTATATGTTGGTC
AAGTTTGCTAATATGTGTGGCGCAACTGTGTGCAAGTCTTGGAACCCAAGTGTCACTCAT
GTCATTGCAGCAACAGATGAAAATGGTGCATGCACCAGAACACTGAAAGTTCTCATGGCA
ATTTTGGGTGGAAAATGGATCCTAACAATTGATTGGATAAAAGCCTGCATTCAAGAAAAT
TATCCTGTGAATGAAGAGGCTTATGAAGTTAGCCTGGACAATCACGGCTGTTTTGGAGGT
CCCAAAGTTGGTAGACTAAGGGCTTCATCCAATGCACCTAAGCTATTTGATGGTTTGAAG
TTTTATCTGAGTGGAGATTATGTCCCAGCTTACAGAATCGACCTGTTAGATCTAGTTGAA
AATGCTGGAGGTTCCATAATCCACACTAAGGAACAGTTGATTTCCCAGACTGATGCTACA
CAAACAACTAGTTCAGCTTGTCTAGTTGTTTATAACAGTGATCCTCCACGTGGTTGTGCA
TTCGGGGAGGAAAGAAACGTTTTGCTTCAACGACAAGCAAAGGCTGAGGAACTGGCCAAG
CCACTTGGTTGTCAGGTCATTCAGCATACATGGATTCTGGAGTCTATTGCTACATGTAAA
TTGGTGCCTTTCTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025927
PEP Infomation

pacid=37453791 transcript=PGSC0003DMT400038153 locus=PGSC0003DMG400014714 ID=PGSC0003DMT400038153.v4.03 annot-version=v4.03
Sequence

MAAEAQSIARFLNPLAFHIQKLGLELKCPLCLNLLTKPMLLPCDHIFCNFCVPSSTQVQC
ECPLCKHQYVDQEIRAVPHMESMISIFRSLDATCNAKVFQFQSPDAGRSLEQSPISVNAD
KSRNEQSVKAIIRSNNPSKEIHRHNEHGMPWNVVNHLSVLPSSDRKEDSKNDGYNAEEID
LNQFQQQSPGSAHSSDSNKDIVKETSELRVMKTNAAKRLVEDSSDVVPFLKKEDSSDVVE
GLMHHTVMHENVFHERDVKRQKKLSYGLPEMALQSHDHNQQRESCSRIIANSDCNLTCKL
SESSFVAHPQEVSDQHLLEGSACAFCLKSKITEGTGPMLHYANGREVVGDATSLSKAIPV
HMKCIDWAPQVYYDGEIIKNLEAELARASKLKCSGCGLKGAALGCLVKSCRRSYHMPCAF
EMQDCRWDTDNFVMLCPSHKSVKFPSEKSKSRKRAKIEARPEPAPITSERLNFWATSSDG
PKEWVLCGSALSSEEKYMLVKFANMCGATVCKSWNPSVTHVIAATDENGACTRTLKVLMA
ILGGKWILTIDWIKACIQENYPVNEEAYEVSLDNHGCFGGPKVGRLRASSNAPKLFDGLK
FYLSGDYVPAYRIDLLDLVENAGGSIIHTKEQLISQTDATQTTSSACLVVYNSDPPRGCA
FGEERNVLLQRQAKAEELAKPLGCQVIQHTWILESIATCKLVPFC*

Transcript Sequence

Transcript ID

PGSC0003DMT400038153
Transcript Infomation

pacid=37453791 locus=PGSC0003DMG400014714 ID=PGSC0003DMT400038153.v4.03 annot-version=v4.03
Sequence

ATGGCGGCGGAAGCTCAAAGCATTGCTCGGTTTCTTAACCCATTGGCTTTTCATATTCAG
AAATTGGGTCTTGAACTCAAATGCCCTCTTTGCTTAAACTTGCTGACTAAACCTATGTTG
CTTCCCTGCGACCATATTTTCTGCAACTTTTGTGTTCCGAGCTCGACCCAAGTTCAATGT
GAATGCCCTTTATGCAAACATCAATATGTTGATCAAGAAATAAGGGCAGTGCCTCATATG
GAGAGTATGATATCCATATTTAGAAGCTTAGATGCTACTTGCAATGCTAAAGTCTTTCAA
TTCCAATCTCCCGATGCTGGAAGATCACTCGAGCAGTCTCCCATTTCTGTTAATGCTGAC
AAATCAAGAAATGAGCAATCTGTCAAAGCCATAATAAGAAGCAATAATCCGAGCAAGGAG
ATTCATAGGCACAATGAACATGGAATGCCATGGAATGTTGTGAATCATTTGAGTGTCTTG
CCTTCGTCTGACAGGAAGGAAGACTCGAAAAATGATGGGTATAATGCAGAGGAAATAGAT
TTGAATCAATTTCAACAGCAGTCACCAGGCAGTGCTCATTCATCAGACAGCAACAAAGAC
ATTGTTAAAGAGACCAGTGAACTGAGAGTTATGAAAACCAATGCTGCAAAGAGGCTTGTT
GAAGATAGCTCAGATGTGGTTCCATTTCTGAAAAAAGAAGATAGCTCAGATGTGGTTGAA
GGTTTAATGCACCACACAGTTATGCATGAAAATGTGTTTCATGAAAGGGATGTGAAGAGA
CAAAAGAAACTAAGCTATGGATTGCCAGAGATGGCCTTGCAGAGTCATGATCATAATCAA
CAAAGAGAGTCTTGTTCAAGAATAATTGCCAACTCTGACTGCAACTTGACATGCAAATTG
AGTGAATCTTCTTTTGTTGCTCATCCACAAGAAGTTTCAGATCAACATCTTCTGGAAGGC
AGTGCTTGTGCTTTCTGCCTCAAATCTAAGATAACAGAGGGAACTGGACCAATGCTGCAC
TATGCAAATGGCAGGGAGGTGGTGGGAGATGCCACTTCACTTTCAAAAGCCATACCTGTG
CATATGAAATGTATTGACTGGGCGCCTCAAGTATATTATGATGGAGAGATCATAAAAAAT
TTGGAGGCTGAATTGGCAAGAGCTTCAAAACTCAAGTGTAGTGGTTGTGGCCTAAAGGGT
GCAGCACTTGGCTGCCTTGTGAAGTCTTGTCGGAGGAGTTACCATATGCCCTGTGCATTT
GAAATGCAGGACTGCCGTTGGGATACTGACAACTTTGTAATGCTGTGTCCAAGCCACAAA
TCAGTTAAATTTCCTAGCGAAAAGTCAAAGTCTAGGAAGCGTGCCAAAATTGAAGCACGT
CCAGAACCTGCTCCCATAACATCCGAGCGATTGAATTTTTGGGCAACATCGTCAGATGGA
CCAAAAGAATGGGTTCTATGCGGATCTGCTCTATCCTCAGAAGAGAAGTATATGTTGGTC
AAGTTTGCTAATATGTGTGGCGCAACTGTGTGCAAGTCTTGGAACCCAAGTGTCACTCAT
GTCATTGCAGCAACAGATGAAAATGGTGCATGCACCAGAACACTGAAAGTTCTCATGGCA
ATTTTGGGTGGAAAATGGATCCTAACAATTGATTGGATAAAAGCCTGCATTCAAGAAAAT
TATCCTGTGAATGAAGAGGCTTATGAAGTTAGCCTGGACAATCACGGCTGTTTTGGAGGT
CCCAAAGTTGGTAGACTAAGGGCTTCATCCAATGCACCTAAGCTATTTGATGGTTTGAAG
TTTTATCTGAGTGGAGATTATGTCCCAGCTTACAGAATCGACCTGTTAGATCTAGTTGAA
AATGCTGGAGGTTCCATAATCCACACTAAGGAACAGTTGATTTCCCAGACTGATGCTACA
CAAACAACTAGTTCAGCTTGTCTAGTTGTTTATAACAGTGATCCTCCACGTGGTTGTGCA
TTCGGGGAGGAAAGAAACGTTTTGCTTCAACGACAAGCAAAGGCTGAGGAACTGGCCAAG
CCACTTGGTTGTCAGGTCATTCAGCATACATGGATTCTGGAGTCTATTGCTACATGTAAA
TTGGTGCCTTTCTGCTGA