Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038147
CDS Infomation

pacid=37451133 polypeptide=PGSC0003DMP400025921 locus=PGSC0003DMG400014711 ID=PGSC0003DMT400038147.v4.03 annot-version=v4.03
Sequence

ATGGCCGACGATGAAGCAGAGATGTACGACAGAGCTAGGGCACAGTTCCCGTTGTCCTTC
GGTAAGCAAGCTAAATCTCAAACATCTCTCGAACTCGTTCACAACGCTACTCGCCGGAAC
AACACCTCCGCCGCCGCCTCCGTTACTCAACCTGCCGACGGTAAACTCGAGCCATCACCT
TTCCCTTCTCTCTCTTCTTCCTCCAAATCCTGGCTTAATTCCCTCAAAAACCCTAAATCT
AGTCATGATTCCAATTCTAAGTCGAAGATTATCGGGCCGAGTCGTCCTCCTGCTGGCTTG
AGCTCGAGCAATGACAAGGAAGAGGAGGAGGATGGTGGTATAATTGGACCACCTCGACCT
GCTGTTGATGCAAAGACGGAGGAGGATGAGGATGGTGAAATGATTGGGCCACCACGACCT
CCGTTAAAAGAGGAGGATGGGGAGATGATTGGGCCACCTCCACCGCCATCGGGCTCAATG
GGGTCAGACTCGGAGGACGATATGGAAGAAGAAGAAGAACAACAAAATCAGTATAGGATA
CCTTTGAGTAATGAAATAGTACTGAAAGGACATACAAAGGTTGTGTCAGTTCTTACTGTG
GACCATTCAGGATCAAGGGTTCTCTCTGGTAGTTATGACTATACTGTTCGGATGTATGAT
TTTCAAGGAATGAATGCTCGGTTACAGTCATTTAGACAGCTGGAACCATCTGAAGGGCAT
CAAGTTCGTAGTTTGAGCTGGAGTCCGACAGCAGACCGATTTTTATGTGTTACTGGGTCA
GCCCAAGCAAAGATCTATGATCGCGATGGACTTACACTTGGGGAATTTGTTAGAGGAGAC
ATGTATATACGTGATCTTAAGAATACAAAAGGTCATATATCTGGATTGACATGTGGAGAA
TGGCACCCTAAAACAAAGGAGACAATTTTAACTTCGTCGGAGGATGGTTCGTTGCGCCTG
TGGGATGTCAATGACTTTAAGAGTCAAAAGCAGGTTATTAAACCAAAACTTGCTCGGCCT
GGGAGAGTTCCTGTAACAACATGTGCTTGGGATCGGGAAGGAAAAAGCATTGCAGGTGGT
GTAGGAGATGGTTCTATACAGATATGGAATCTTAAACCTGGATGGGGGAGCAGGCCAGAT
ATATATGTAGCAAATGCCCACTCAGATGATATTACAGGAGTCAAATTTTCAAGTGATGGG
CGGATACTATTGTCAAGAAGTTTTGATGGTTCCTTGAAGGTTTGGGATTTGCGCCAGATG
AAAGAACCCTTGAAAGTGTTTGATGATCTCCCAAATAATTATGCTCAAACTAACGTTGCA
TTTAGTCCTGATGAACAACTGTTCATAACTGGGACGTCTGTTGAAAAAGATGGGACTACT
GGAGGAATGCTATGCTTCTTTGATCGAGGAAAGCTAGAGCTAGTGTCAAGAGTTGGAATA
TCTCCTTCTTACAGTGTTGTGCAGTGTGCCTGGCACCCTAGGCTGAACCAGATCTTTGCA
ACAGTTGGAGATAAACATGAAGGTGGAACACACATTTTATATGATCCAACACTGAGTGAA
AGAGGAGCACTAGTTTGTGTTGCTCGTGCACCCAGGAAAAAGTCTGTGGATGATTTCCAG
GCAGAACCAGTTATTCATAATCCACATGCATTACCCTTATTTAGAGATCAACCTAGTCGC
AAGCGTCAGCGAGAGAAAGAACTAAAGGATCCGCTGAAGTCACATAAACCTGAGCTGCCA
ATGACAGGGCCAGGTTTTGGTGGTAGAGTTGGTTCAACCAAGGGAAGCTTGTTAACACAA
TACCTTCTTAAGCAAGGTGGCTTGATAAAGGAGACTTGGATGGAGGAGGATCCTAGAGAA
GCAATCTTGAAGCATGCTGATGCAGCTGCAAAAGATCCAAAATTTATTGCTCCAGCATAT
GCTGATACACAACCTGAGACACTCTTTGCGGAGCCGGATGCCGAAGAAGAAGATAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025921
PEP Infomation

pacid=37451133 transcript=PGSC0003DMT400038147 locus=PGSC0003DMG400014711 ID=PGSC0003DMT400038147.v4.03 annot-version=v4.03
Sequence

MADDEAEMYDRARAQFPLSFGKQAKSQTSLELVHNATRRNNTSAAASVTQPADGKLEPSP
FPSLSSSSKSWLNSLKNPKSSHDSNSKSKIIGPSRPPAGLSSSNDKEEEEDGGIIGPPRP
AVDAKTEEDEDGEMIGPPRPPLKEEDGEMIGPPPPPSGSMGSDSEDDMEEEEEQQNQYRI
PLSNEIVLKGHTKVVSVLTVDHSGSRVLSGSYDYTVRMYDFQGMNARLQSFRQLEPSEGH
QVRSLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVRGDMYIRDLKNTKGHISGLTCGE
WHPKTKETILTSSEDGSLRLWDVNDFKSQKQVIKPKLARPGRVPVTTCAWDREGKSIAGG
VGDGSIQIWNLKPGWGSRPDIYVANAHSDDITGVKFSSDGRILLSRSFDGSLKVWDLRQM
KEPLKVFDDLPNNYAQTNVAFSPDEQLFITGTSVEKDGTTGGMLCFFDRGKLELVSRVGI
SPSYSVVQCAWHPRLNQIFATVGDKHEGGTHILYDPTLSERGALVCVARAPRKKSVDDFQ
AEPVIHNPHALPLFRDQPSRKRQREKELKDPLKSHKPELPMTGPGFGGRVGSTKGSLLTQ
YLLKQGGLIKETWMEEDPREAILKHADAAAKDPKFIAPAYADTQPETLFAEPDAEEEDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400038147
Transcript Infomation

pacid=37451133 locus=PGSC0003DMG400014711 ID=PGSC0003DMT400038147.v4.03 annot-version=v4.03
Sequence

ATGGCCGACGATGAAGCAGAGATGTACGACAGAGCTAGGGCACAGTTCCCGTTGTCCTTC
GGTAAGCAAGCTAAATCTCAAACATCTCTCGAACTCGTTCACAACGCTACTCGCCGGAAC
AACACCTCCGCCGCCGCCTCCGTTACTCAACCTGCCGACGGTAAACTCGAGCCATCACCT
TTCCCTTCTCTCTCTTCTTCCTCCAAATCCTGGCTTAATTCCCTCAAAAACCCTAAATCT
AGTCATGATTCCAATTCTAAGTCGAAGATTATCGGGCCGAGTCGTCCTCCTGCTGGCTTG
AGCTCGAGCAATGACAAGGAAGAGGAGGAGGATGGTGGTATAATTGGACCACCTCGACCT
GCTGTTGATGCAAAGACGGAGGAGGATGAGGATGGTGAAATGATTGGGCCACCACGACCT
CCGTTAAAAGAGGAGGATGGGGAGATGATTGGGCCACCTCCACCGCCATCGGGCTCAATG
GGGTCAGACTCGGAGGACGATATGGAAGAAGAAGAAGAACAACAAAATCAGTATAGGATA
CCTTTGAGTAATGAAATAGTACTGAAAGGACATACAAAGGTTGTGTCAGTTCTTACTGTG
GACCATTCAGGATCAAGGGTTCTCTCTGGTAGTTATGACTATACTGTTCGGATGTATGAT
TTTCAAGGAATGAATGCTCGGTTACAGTCATTTAGACAGCTGGAACCATCTGAAGGGCAT
CAAGTTCGTAGTTTGAGCTGGAGTCCGACAGCAGACCGATTTTTATGTGTTACTGGGTCA
GCCCAAGCAAAGATCTATGATCGCGATGGACTTACACTTGGGGAATTTGTTAGAGGAGAC
ATGTATATACGTGATCTTAAGAATACAAAAGGTCATATATCTGGATTGACATGTGGAGAA
TGGCACCCTAAAACAAAGGAGACAATTTTAACTTCGTCGGAGGATGGTTCGTTGCGCCTG
TGGGATGTCAATGACTTTAAGAGTCAAAAGCAGGTTATTAAACCAAAACTTGCTCGGCCT
GGGAGAGTTCCTGTAACAACATGTGCTTGGGATCGGGAAGGAAAAAGCATTGCAGGTGGT
GTAGGAGATGGTTCTATACAGATATGGAATCTTAAACCTGGATGGGGGAGCAGGCCAGAT
ATATATGTAGCAAATGCCCACTCAGATGATATTACAGGAGTCAAATTTTCAAGTGATGGG
CGGATACTATTGTCAAGAAGTTTTGATGGTTCCTTGAAGGTTTGGGATTTGCGCCAGATG
AAAGAACCCTTGAAAGTGTTTGATGATCTCCCAAATAATTATGCTCAAACTAACGTTGCA
TTTAGTCCTGATGAACAACTGTTCATAACTGGGACGTCTGTTGAAAAAGATGGGACTACT
GGAGGAATGCTATGCTTCTTTGATCGAGGAAAGCTAGAGCTAGTGTCAAGAGTTGGAATA
TCTCCTTCTTACAGTGTTGTGCAGTGTGCCTGGCACCCTAGGCTGAACCAGATCTTTGCA
ACAGTTGGAGATAAACATGAAGGTGGAACACACATTTTATATGATCCAACACTGAGTGAA
AGAGGAGCACTAGTTTGTGTTGCTCGTGCACCCAGGAAAAAGTCTGTGGATGATTTCCAG
GCAGAACCAGTTATTCATAATCCACATGCATTACCCTTATTTAGAGATCAACCTAGTCGC
AAGCGTCAGCGAGAGAAAGAACTAAAGGATCCGCTGAAGTCACATAAACCTGAGCTGCCA
ATGACAGGGCCAGGTTTTGGTGGTAGAGTTGGTTCAACCAAGGGAAGCTTGTTAACACAA
TACCTTCTTAAGCAAGGTGGCTTGATAAAGGAGACTTGGATGGAGGAGGATCCTAGAGAA
GCAATCTTGAAGCATGCTGATGCAGCTGCAAAAGATCCAAAATTTATTGCTCCAGCATAT
GCTGATACACAACCTGAGACACTCTTTGCGGAGCCGGATGCCGAAGAAGAAGATAAGTAA