Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038143
CDS Infomation

pacid=37454167 polypeptide=PGSC0003DMP400025918 locus=PGSC0003DMG400014709 ID=PGSC0003DMT400038143.v4.03 annot-version=v4.03
Sequence

ATGGAAGCAATAAGAATAAGCTGTGCTGGATATCCTACTCGGAAACCCTTTTATGAATTT
TTAGATCGCTTTGGCATCCTTTCGCCTGAAGTTTTAGATGGAAGTACGGACGAGGTCACT
GCATGCACACGCCTTTTAGAGAAAGTCGGCCTTCAAGGATATCAGATTGGTAAAACAAAA
GTGTTTCTAAGGGCTGGGCAGATGGCAGAGCTAGACAGTCGCAGGACAGAGGTGTTAGGG
AGATCGGCGAGCATCATTCAGAGGAAAGTTCGTTCTCACATGGCTCGAAGAAATTTTACA
TTATTACGTCAGTTGGCAAGAAGGATACAATCGATGTGCAGAGGAGAACTTGCTCGGCGT
GTATATGAGAGCTTGCGGAGAGAAGCAGCTTGTCTGAAGATCCAGACAGACATGCGCATG
CATCTTGCTAGGAAGGGTTACAAAGAATTGTGCTCTGCTGCCATTTCAATTCAGACAGGA
ATGCGTGGGATGGCTGCACGCAATGAAGTACGATTCAGGAGGCAGACAAAAGCTGCCATT
ATCATTCAGAGTCATTCTCGTGCATTCTTGGCCCGGTTGAAATACAAGAAACTCAAGAAA
GCTGCTATTACCACTCAATGTGCTTGGAGAGCTAGAGTCGCTCGTGGGGAACTACGGAAA
CTTAAGATGGCTGCAAGGGAGACTGGTGCGCTTCAAGCTGCAAAGAATAAATTAGAGAAG
CAAGTTGAAGAATTAACTTGGAGACTACAACTGGAGAAACGCATGAGGGCTGACATGGAA
GAAGCAAAAACACAAGAAAATGCAAAACTGCAATCAGCTTTGCAAGAAGTTCAACTACAG
TTCAAGGAAACACAAGAAATGTTTGTCAAAGAACGTGAAACTACAAAAAGGGCGGCAGAG
GAAGTTCCTATTATGCAGGAAGTTCCTGTTGTTGATCATGAAATGATGAACAAACTTAGT
GTTGAAAATGAGAAACTAAAGTCTTTGGTAAGCTCTCTAGAACAGAAGATTGATGAGACA
GAAAAAAAGTACGAAGAGACAAGCAAACTTAGTGAGGAGAGGTTGAGGCAGGTGTTGGAT
GCAGAGTCTATAATTGTTCAGTTGAAGACTACTATGCAAAGGTTCCAGGAAAGGAATTTT
GATTTGGAATCTGAGAACCAGATTCTTCAGCAATCTCTGTTAGCCCCTGCCAAGCAGGTT
TCAGATCATTCACCTAGTCTGTCTTCCAAGGTGCAGATAGAAGAAAATGGCTACCACCTC
AAAGAAGAAACTAGAACCAATGATCCACCAGGTTCAACACCTGCTAAAAAAGTTGAAACC
CCTAATAGCAAGTCAAGGAAACCTCCTATTGACCGACAACGTGAAGACATTGGTGCACTC
ATTGACTGTGTGATGAAGGATGTTGGATTCAGTCAAAGCAAGCCTGTTGCAGCTTTTACC
ATCTACAAATGTCTTCTTCACTGGAAATCTTTTGAAGCAGAAAAGACTAGCGTGTTTGAT
CGTTTAGTGCAGATGATTGGTTCTGCCATTGAGAATCAAGATAGTGATGACCACATGGCA
TACTGGCTGTCAAATACCTCAACATTGTTATTGTTAATCCAAAAAAGCCTGAAGCCAGAC
AGTGCAGTTGGTGCGACTCCTACCCGTAAACCACAGCCTGCAACATCCCTGTTTGGGAGA
ATGACATTGGGATTTCGCTCGTCCTCTTCTGACATCAATCTTGCTGGAGTAGTGCACCAG
GTTCAAGCAAAATACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTTGAGAAA
ATGTATGGAATTATTCGTGATAACTTGAAGAAGGAGTTAGGGTCACTTCTTTCCTTATGT
ATCCAGGCACCAAGGACCTCCAAAGGAAGTGTGCTAAAGTCTGGTCGATCCTTTGGCAAA
GATTATTCAATAAATCACTGGCGAGGGATAATTGAATGCCTTGATTCTCTTCTCTGTACT
TTGAAAGAAAACTTTATGCCTCCGATTCTTGTTCAGAAGATATTTAGTCAAGCCTTTTCA
TACATGAATGTACAGCTCTTTAACAGTTTTCTTCTTCGCCGGGAGTGTTGTACATTCAGT
AATGCAGAATATGTTAAATCTGGCTTGGCTGAGCTAGAGCTGTGGTGCTCCCAAGCAAAG
GAAGAGTATGCTGGCTCATCCTGGGATGAACTCAGACATATACGACAAGTTGTTGGATTC
TTGGTTATACATCAGAAGTACAGAATTTCGTATGATGATATCACTAATGATTTGTGTCCT
GTTCTCAGTGTCCAGCAACTTTACAGAGTATGTACTCTTTACTGGGATGACAAATACAAT
ACACGAAGTGTCTCCCCAGATGTCATATCTAACATGAGGGTACTTATGACAGAGGACTCG
AACGATGCCAAGAGCAACTCTTTTTTGTTAGATGATAACCCAAGCATCCCATTCTCAATT
GAAGAAGTTTCAAATTCACTTCAAGTCAAGGATTTCGCAGATGTCAAACCTGCAACCAAA
CTTCTTGAGAATCCAGCCTTCCAATTTTTACATGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025918
PEP Infomation

pacid=37454167 transcript=PGSC0003DMT400038143 locus=PGSC0003DMG400014709 ID=PGSC0003DMT400038143.v4.03 annot-version=v4.03
Sequence

MEAIRISCAGYPTRKPFYEFLDRFGILSPEVLDGSTDEVTACTRLLEKVGLQGYQIGKTK
VFLRAGQMAELDSRRTEVLGRSASIIQRKVRSHMARRNFTLLRQLARRIQSMCRGELARR
VYESLRREAACLKIQTDMRMHLARKGYKELCSAAISIQTGMRGMAARNEVRFRRQTKAAI
IIQSHSRAFLARLKYKKLKKAAITTQCAWRARVARGELRKLKMAARETGALQAAKNKLEK
QVEELTWRLQLEKRMRADMEEAKTQENAKLQSALQEVQLQFKETQEMFVKERETTKRAAE
EVPIMQEVPVVDHEMMNKLSVENEKLKSLVSSLEQKIDETEKKYEETSKLSEERLRQVLD
AESIIVQLKTTMQRFQERNFDLESENQILQQSLLAPAKQVSDHSPSLSSKVQIEENGYHL
KEETRTNDPPGSTPAKKVETPNSKSRKPPIDRQREDIGALIDCVMKDVGFSQSKPVAAFT
IYKCLLHWKSFEAEKTSVFDRLVQMIGSAIENQDSDDHMAYWLSNTSTLLLLIQKSLKPD
SAVGATPTRKPQPATSLFGRMTLGFRSSSSDINLAGVVHQVQAKYPALLFKQQLTAYVEK
MYGIIRDNLKKELGSLLSLCIQAPRTSKGSVLKSGRSFGKDYSINHWRGIIECLDSLLCT
LKENFMPPILVQKIFSQAFSYMNVQLFNSFLLRRECCTFSNAEYVKSGLAELELWCSQAK
EEYAGSSWDELRHIRQVVGFLVIHQKYRISYDDITNDLCPVLSVQQLYRVCTLYWDDKYN
TRSVSPDVISNMRVLMTEDSNDAKSNSFLLDDNPSIPFSIEEVSNSLQVKDFADVKPATK
LLENPAFQFLHE*

Transcript Sequence

Transcript ID

PGSC0003DMT400038143
Transcript Infomation

pacid=37454167 locus=PGSC0003DMG400014709 ID=PGSC0003DMT400038143.v4.03 annot-version=v4.03
Sequence

ATGGAAGCAATAAGAATAAGCTGTGCTGGATATCCTACTCGGAAACCCTTTTATGAATTT
TTAGATCGCTTTGGCATCCTTTCGCCTGAAGTTTTAGATGGAAGTACGGACGAGGTCACT
GCATGCACACGCCTTTTAGAGAAAGTCGGCCTTCAAGGATATCAGATTGGTAAAACAAAA
GTGTTTCTAAGGGCTGGGCAGATGGCAGAGCTAGACAGTCGCAGGACAGAGGTGTTAGGG
AGATCGGCGAGCATCATTCAGAGGAAAGTTCGTTCTCACATGGCTCGAAGAAATTTTACA
TTATTACGTCAGTTGGCAAGAAGGATACAATCGATGTGCAGAGGAGAACTTGCTCGGCGT
GTATATGAGAGCTTGCGGAGAGAAGCAGCTTGTCTGAAGATCCAGACAGACATGCGCATG
CATCTTGCTAGGAAGGGTTACAAAGAATTGTGCTCTGCTGCCATTTCAATTCAGACAGGA
ATGCGTGGGATGGCTGCACGCAATGAAGTACGATTCAGGAGGCAGACAAAAGCTGCCATT
ATCATTCAGAGTCATTCTCGTGCATTCTTGGCCCGGTTGAAATACAAGAAACTCAAGAAA
GCTGCTATTACCACTCAATGTGCTTGGAGAGCTAGAGTCGCTCGTGGGGAACTACGGAAA
CTTAAGATGGCTGCAAGGGAGACTGGTGCGCTTCAAGCTGCAAAGAATAAATTAGAGAAG
CAAGTTGAAGAATTAACTTGGAGACTACAACTGGAGAAACGCATGAGGGCTGACATGGAA
GAAGCAAAAACACAAGAAAATGCAAAACTGCAATCAGCTTTGCAAGAAGTTCAACTACAG
TTCAAGGAAACACAAGAAATGTTTGTCAAAGAACGTGAAACTACAAAAAGGGCGGCAGAG
GAAGTTCCTATTATGCAGGAAGTTCCTGTTGTTGATCATGAAATGATGAACAAACTTAGT
GTTGAAAATGAGAAACTAAAGTCTTTGGTAAGCTCTCTAGAACAGAAGATTGATGAGACA
GAAAAAAAGTACGAAGAGACAAGCAAACTTAGTGAGGAGAGGTTGAGGCAGGTGTTGGAT
GCAGAGTCTATAATTGTTCAGTTGAAGACTACTATGCAAAGGTTCCAGGAAAGGAATTTT
GATTTGGAATCTGAGAACCAGATTCTTCAGCAATCTCTGTTAGCCCCTGCCAAGCAGGTT
TCAGATCATTCACCTAGTCTGTCTTCCAAGGTGCAGATAGAAGAAAATGGCTACCACCTC
AAAGAAGAAACTAGAACCAATGATCCACCAGGTTCAACACCTGCTAAAAAAGTTGAAACC
CCTAATAGCAAGTCAAGGAAACCTCCTATTGACCGACAACGTGAAGACATTGGTGCACTC
ATTGACTGTGTGATGAAGGATGTTGGATTCAGTCAAAGCAAGCCTGTTGCAGCTTTTACC
ATCTACAAATGTCTTCTTCACTGGAAATCTTTTGAAGCAGAAAAGACTAGCGTGTTTGAT
CGTTTAGTGCAGATGATTGGTTCTGCCATTGAGAATCAAGATAGTGATGACCACATGGCA
TACTGGCTGTCAAATACCTCAACATTGTTATTGTTAATCCAAAAAAGCCTGAAGCCAGAC
AGTGCAGTTGGTGCGACTCCTACCCGTAAACCACAGCCTGCAACATCCCTGTTTGGGAGA
ATGACATTGGGATTTCGCTCGTCCTCTTCTGACATCAATCTTGCTGGAGTAGTGCACCAG
GTTCAAGCAAAATACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCATATGTTGAGAAA
ATGTATGGAATTATTCGTGATAACTTGAAGAAGGAGTTAGGGTCACTTCTTTCCTTATGT
ATCCAGGCACCAAGGACCTCCAAAGGAAGTGTGCTAAAGTCTGGTCGATCCTTTGGCAAA
GATTATTCAATAAATCACTGGCGAGGGATAATTGAATGCCTTGATTCTCTTCTCTGTACT
TTGAAAGAAAACTTTATGCCTCCGATTCTTGTTCAGAAGATATTTAGTCAAGCCTTTTCA
TACATGAATGTACAGCTCTTTAACAGTTTTCTTCTTCGCCGGGAGTGTTGTACATTCAGT
AATGCAGAATATGTTAAATCTGGCTTGGCTGAGCTAGAGCTGTGGTGCTCCCAAGCAAAG
GAAGAGTATGCTGGCTCATCCTGGGATGAACTCAGACATATACGACAAGTTGTTGGATTC
TTGGTTATACATCAGAAGTACAGAATTTCGTATGATGATATCACTAATGATTTGTGTCCT
GTTCTCAGTGTCCAGCAACTTTACAGAGTATGTACTCTTTACTGGGATGACAAATACAAT
ACACGAAGTGTCTCCCCAGATGTCATATCTAACATGAGGGTACTTATGACAGAGGACTCG
AACGATGCCAAGAGCAACTCTTTTTTGTTAGATGATAACCCAAGCATCCCATTCTCAATT
GAAGAAGTTTCAAATTCACTTCAAGTCAAGGATTTCGCAGATGTCAAACCTGCAACCAAA
CTTCTTGAGAATCCAGCCTTCCAATTTTTACATGAGTGA