Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038135
CDS Infomation

pacid=37452344 polypeptide=PGSC0003DMP400025912 locus=PGSC0003DMG400014705 ID=PGSC0003DMT400038135.v4.03 annot-version=v4.03
Sequence

ATGAATTACTGCGTTGTTCCTGATTTCAAAATGGATGATGATTATTCTGATATTGCTTCT
GCTATTTTCAACATATCGAAGAAATCTACAATAGCAGATGAAGAAATCATGGAGCTAGTA
TGGCAAAATGGTCGAGTAATTATGCAAAGCCAAAATCAAAGATCTGTAAGGAAATCTAAC
CTTTTTTCCGAGCAATCCGCCGTAGAAGAAACGGTAGCAGCTTCAGCTCCACTGTATATG
CAAGAGGATGAAATGAACTCATGGCTTCAATCTCCACTTGATGATTCCTCCTTCGATGAT
TTTCTAAATACTACACCGAGTTGCGCCGCCGTGACCTCCGCCGCTGCACCGCCGGGAGAA
ATTGGTACTTCGACTGTAGAGATCCGTCCGCCTCTAGCTCCACCGTCTTCACGGCCGGTT
AGATGTACAGAGGGTGAATTACCACATCGATTACAGAATTTTGGGCATTTTTCACGGTTG
CCTGAGGGAGCAATTTTACGAAATGGTAATACATCAAGTTCTCGCCACTCAGTTAGGGCA
TCGACGATTGTGGATTCAAACGAGACTCCGGTAGTAGCAGGACCGGAATATATGATTTCA
CGCGTATCAGATGATGTACCACTAGCTTCCGCCGTGAATGTCAGAGGTGTGGAAATGACG
GCTATGGCGACAACAAGCGGCGATAGGGAAGTGACGACGGCATGCGAGTTGACATTGACA
GCATCTACAAGTGGCTCAGGAGGTAGTGTAAGCACCAGATCAGATCTGCCACAGCCGTCG
TATAAGGAGGCGGATGCGGCGGCGGAGGATCGGAAACGGAAAGGTAGAGAATCGGACGAC
AATGATGGTCAGAGTGAGGATGTTGAATATGAATTTGCTGATGCAAGGAAGCAAGTAAGA
AGTTCTACATCGGCAAAGAAATCTCGTGCAGCAGAGGTCCATAATCTTTCTGAAAGGAAA
CGCCGAGATAGAATAAATGAGAAGATGAAGGCTCTACAAGAACTCATACCGCACTGCAAC
AAGTCAGACAAAGCTTCAATGCTGGATGAAGCTATTGAGTACCTTAAATCATTGCAATTG
CAAGTACAGATGATGGCCACTGGATGCAGCTTGGTCCCTGTGATGTATCCTGGAATCCCG
CAATACATGACAACAATGGGAATGAATATGGGCATGGGGATGAGTATGGAAATGGGCAGG
AACCTGCCAATGGTTTCATATCCGCCGCTAATGCCAGATCCAGCAATGCGGAATGCAGCT
GCAGCAGCACAAATGACTCCTCAATATCCTCTTCCGGCATATCATATGCCTCCATTTCCT
GCACCTGATCCATCCAGAATCCCAGTTGGGAACCAGGCAGATCCTCCGAGGCTATACTCA
CATGTTGGACATAATATTAATCAGCCAAGACTTGCGAATTTTAGTGATCCATATCATCAA
TATTTTGGTCTACAGCAGGCACAACCTATGTTACTCCAGGGAGTGGAACAGCCGAGCAGC
AGTAAACCAGAAGAAAGTGCAGGGAATCATCAATCTGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025912
PEP Infomation

pacid=37452344 transcript=PGSC0003DMT400038135 locus=PGSC0003DMG400014705 ID=PGSC0003DMT400038135.v4.03 annot-version=v4.03
Sequence

MNYCVVPDFKMDDDYSDIASAIFNISKKSTIADEEIMELVWQNGRVIMQSQNQRSVRKSN
LFSEQSAVEETVAASAPLYMQEDEMNSWLQSPLDDSSFDDFLNTTPSCAAVTSAAAPPGE
IGTSTVEIRPPLAPPSSRPVRCTEGELPHRLQNFGHFSRLPEGAILRNGNTSSSRHSVRA
STIVDSNETPVVAGPEYMISRVSDDVPLASAVNVRGVEMTAMATTSGDREVTTACELTLT
ASTSGSGGSVSTRSDLPQPSYKEADAAAEDRKRKGRESDDNDGQSEDVEYEFADARKQVR
SSTSAKKSRAAEVHNLSERKRRDRINEKMKALQELIPHCNKSDKASMLDEAIEYLKSLQL
QVQMMATGCSLVPVMYPGIPQYMTTMGMNMGMGMSMEMGRNLPMVSYPPLMPDPAMRNAA
AAAQMTPQYPLPAYHMPPFPAPDPSRIPVGNQADPPRLYSHVGHNINQPRLANFSDPYHQ
YFGLQQAQPMLLQGVEQPSSSKPEESAGNHQSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400038135
Transcript Infomation

pacid=37452344 locus=PGSC0003DMG400014705 ID=PGSC0003DMT400038135.v4.03 annot-version=v4.03
Sequence

ATGAATTACTGCGTTGTTCCTGATTTCAAAATGGATGATGATTATTCTGATATTGCTTCT
GCTATTTTCAACATATCGAAGAAATCTACAATAGCAGATGAAGAAATCATGGAGCTAGTA
TGGCAAAATGGTCGAGTAATTATGCAAAGCCAAAATCAAAGATCTGTAAGGAAATCTAAC
CTTTTTTCCGAGCAATCCGCCGTAGAAGAAACGGTAGCAGCTTCAGCTCCACTGTATATG
CAAGAGGATGAAATGAACTCATGGCTTCAATCTCCACTTGATGATTCCTCCTTCGATGAT
TTTCTAAATACTACACCGAGTTGCGCCGCCGTGACCTCCGCCGCTGCACCGCCGGGAGAA
ATTGGTACTTCGACTGTAGAGATCCGTCCGCCTCTAGCTCCACCGTCTTCACGGCCGGTT
AGATGTACAGAGGGTGAATTACCACATCGATTACAGAATTTTGGGCATTTTTCACGGTTG
CCTGAGGGAGCAATTTTACGAAATGGTAATACATCAAGTTCTCGCCACTCAGTTAGGGCA
TCGACGATTGTGGATTCAAACGAGACTCCGGTAGTAGCAGGACCGGAATATATGATTTCA
CGCGTATCAGATGATGTACCACTAGCTTCCGCCGTGAATGTCAGAGGTGTGGAAATGACG
GCTATGGCGACAACAAGCGGCGATAGGGAAGTGACGACGGCATGCGAGTTGACATTGACA
GCATCTACAAGTGGCTCAGGAGGTAGTGTAAGCACCAGATCAGATCTGCCACAGCCGTCG
TATAAGGAGGCGGATGCGGCGGCGGAGGATCGGAAACGGAAAGGTAGAGAATCGGACGAC
AATGATGGTCAGAGTGAGGATGTTGAATATGAATTTGCTGATGCAAGGAAGCAAGTAAGA
AGTTCTACATCGGCAAAGAAATCTCGTGCAGCAGAGGTCCATAATCTTTCTGAAAGGAAA
CGCCGAGATAGAATAAATGAGAAGATGAAGGCTCTACAAGAACTCATACCGCACTGCAAC
AAGTCAGACAAAGCTTCAATGCTGGATGAAGCTATTGAGTACCTTAAATCATTGCAATTG
CAAGTACAGATGATGGCCACTGGATGCAGCTTGGTCCCTGTGATGTATCCTGGAATCCCG
CAATACATGACAACAATGGGAATGAATATGGGCATGGGGATGAGTATGGAAATGGGCAGG
AACCTGCCAATGGTTTCATATCCGCCGCTAATGCCAGATCCAGCAATGCGGAATGCAGCT
GCAGCAGCACAAATGACTCCTCAATATCCTCTTCCGGCATATCATATGCCTCCATTTCCT
GCACCTGATCCATCCAGAATCCCAGTTGGGAACCAGGCAGATCCTCCGAGGCTATACTCA
CATGTTGGACATAATATTAATCAGCCAAGACTTGCGAATTTTAGTGATCCATATCATCAA
TATTTTGGTCTACAGCAGGCACAACCTATGTTACTCCAGGGAGTGGAACAGCCGAGCAGC
AGTAAACCAGAAGAAAGTGCAGGGAATCATCAATCTGGTTGA