Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038105
CDS Infomation

pacid=37451039 polypeptide=PGSC0003DMP400025891 locus=PGSC0003DMG400014693 ID=PGSC0003DMT400038105.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAAACCCTAGGGTCGATCGTGCCTTTCGTTCTATGAAAGCTCTCGGGATTTCT
GGAGAGAAGGTGAAGCCAGTGTTGAAGAATCTTTTAAGATTGTATAACAAAAATTGGGAC
CTTATAGAAGCGGAGAACTACAGGGTCCTCGCCGATGCAATATTTGATGATGATGAAGCA
AAGGATGCAGAAAGTAAAAAGTCAACTGAGGATACCGAACAAGAGGCTCTGGTGCAAGAT
GAGCCTGAACCACCTCTGAAAAGGCAGCGCTTAAAAAATCAATCAAGTCAACCAAATGAG
TCTCTTGAATCTCAATTGCAAAACCAGTCACCTAGTGTTTTTGATTCCCCTCAGTCCATG
GGCAATGAATCACAGCCTGGATCACGCCCATCACTTGATAGAAACAAAGGAAAGCAGCCC
ATGTTTTCCGACTCATTAGTACCACAGGAAGGATTGCCTTCATCTCAGCCTTCTGACGTG
GACAAGAGCCTTCCGGTTCCCAGGAGAGCTGGATCTACTTCTGGTTCTGGCATCCCAGTG
TCACCTACGAAGGATGCTATTGCTAATCACACTTTTATCAAACCTAAGGATGAGCCAATC
ACTGATGACCTGCCACGTCTTGAAGTTCCTGTTGCCATCATCCGCCCAGGTTCATCAAGT
AAAGGGAAGTCTTCAGTTGCAAGCAGTTCAAAAGGTAGACAAGATGATAGTAACGCATCG
GCCACTGTAGTTGAAGCAGATACAAATGATGGAAATCCACCTAGTCCAGGAGTAGCTAAT
GGCAAGCCTGAAACAAACACGGTTAAACCTTCTTCCGCCCTGGAGATAGCTTCCTCACAA
TCTGGAGAGGTGAAAATTATCTTGAACTATGGCTCGGTTCTCGGAAGATCAGATTTCCAC
TTGCCTACTCTTGATGCAGTGGTGAAGTTAATGGACGATAAATGTCTGAAAGAATACAAA
GAACTTGATCCTAATTTTTCCGTGATGAAGATCATGACAGACATTTGTCAGTGCTTCTGG
GAGATGAGCAGTGAATCAACAAATAAATCATCTGACGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025891
PEP Infomation

pacid=37451039 transcript=PGSC0003DMT400038105 locus=PGSC0003DMG400014693 ID=PGSC0003DMT400038105.v4.03 annot-version=v4.03
Sequence

MPPNPRVDRAFRSMKALGISGEKVKPVLKNLLRLYNKNWDLIEAENYRVLADAIFDDDEA
KDAESKKSTEDTEQEALVQDEPEPPLKRQRLKNQSSQPNESLESQLQNQSPSVFDSPQSM
GNESQPGSRPSLDRNKGKQPMFSDSLVPQEGLPSSQPSDVDKSLPVPRRAGSTSGSGIPV
SPTKDAIANHTFIKPKDEPITDDLPRLEVPVAIIRPGSSSKGKSSVASSSKGRQDDSNAS
ATVVEADTNDGNPPSPGVANGKPETNTVKPSSALEIASSQSGEVKIILNYGSVLGRSDFH
LPTLDAVVKLMDDKCLKEYKELDPNFSVMKIMTDICQCFWEMSSESTNKSSDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400038105
Transcript Infomation

pacid=37451039 locus=PGSC0003DMG400014693 ID=PGSC0003DMT400038105.v4.03 annot-version=v4.03
Sequence

ATGCCTCCAAACCCTAGGGTCGATCGTGCCTTTCGTTCTATGAAAGCTCTCGGGATTTCT
GGAGAGAAGGTGAAGCCAGTGTTGAAGAATCTTTTAAGATTGTATAACAAAAATTGGGAC
CTTATAGAAGCGGAGAACTACAGGGTCCTCGCCGATGCAATATTTGATGATGATGAAGCA
AAGGATGCAGAAAGTAAAAAGTCAACTGAGGATACCGAACAAGAGGCTCTGGTGCAAGAT
GAGCCTGAACCACCTCTGAAAAGGCAGCGCTTAAAAAATCAATCAAGTCAACCAAATGAG
TCTCTTGAATCTCAATTGCAAAACCAGTCACCTAGTGTTTTTGATTCCCCTCAGTCCATG
GGCAATGAATCACAGCCTGGATCACGCCCATCACTTGATAGAAACAAAGGAAAGCAGCCC
ATGTTTTCCGACTCATTAGTACCACAGGAAGGATTGCCTTCATCTCAGCCTTCTGACGTG
GACAAGAGCCTTCCGGTTCCCAGGAGAGCTGGATCTACTTCTGGTTCTGGCATCCCAGTG
TCACCTACGAAGGATGCTATTGCTAATCACACTTTTATCAAACCTAAGGATGAGCCAATC
ACTGATGACCTGCCACGTCTTGAAGTTCCTGTTGCCATCATCCGCCCAGGTTCATCAAGT
AAAGGGAAGTCTTCAGTTGCAAGCAGTTCAAAAGGTAGACAAGATGATAGTAACGCATCG
GCCACTGTAGTTGAAGCAGATACAAATGATGGAAATCCACCTAGTCCAGGAGTAGCTAAT
GGCAAGCCTGAAACAAACACGGTTAAACCTTCTTCCGCCCTGGAGATAGCTTCCTCACAA
TCTGGAGAGGTGAAAATTATCTTGAACTATGGCTCGGTTCTCGGAAGATCAGATTTCCAC
TTGCCTACTCTTGATGCAGTGGTGAAGTTAATGGACGATAAATGTCTGAAAGAATACAAA
GAACTTGATCCTAATTTTTCCGTGATGAAGATCATGACAGACATTTGTCAGTGCTTCTGG
GAGATGAGCAGTGAATCAACAAATAAATCATCTGACGAGTGA