Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038080
CDS Infomation

pacid=37437665 polypeptide=PGSC0003DMP400025872 locus=PGSC0003DMG400014681 ID=PGSC0003DMT400038080.v4.03 annot-version=v4.03
Sequence

ATGGAGAGCTCCGGGGAATTGGTGCCTTTTCCGTTGCTGATGACTTGCAATTACCGGGCA
TGTACCATCCCTTACAGGTTTCCTTCCAACAATCCCACTAAACCAACGCCCACTGAGCTT
TCCTGGATCCACGTCTTCATGAATTCCATCCCTTCTTTTAGGAAGAGGGCCGAGAGCGAT
GACACTGTTCCAGATGCTCTTTCTCGAGCCGAAAAGTTTGCTCACAGGTACACTGAAATA
CTCGAGGATTTGAAGAAAGATCCTAAAAGTCACGGAGGGCCTCCTGATGGCATTCTTCTT
TGTCGCCTTAGGGAGCAAGTGCTTAGGGAATTGGGATTCAGAGATATATTTAAAAAAGTT
AAGGACGAAGAAAATGCAAAGGCTATATCCTTATTTGAGGATGTAGTACATCTAAATGAT
GCTATTGAGGATGAAGCTAAGCGTATGGAGAACTTGGTCAAAGGGATTTTTGCAGGAAAC
CTATTTGATCTTGGCTCGGCACAGCTTGCGGAGCTATTTTCAAGGGATGGCATTTCTTTT
TTAGCTAGTTGCCAAAACCTCGTTCCTCGACCTTGGGTTATTGATGACTTGGATACTTTC
ATAACAAAATGGAGCAGAGAATCATGGAAAAAGGCTGTAATCTTTGTGGATAATTCTGGT
GCAGATATTATTCTGGGCATTCTGCCATTTACGAGAGAATTACTTCGTCATGGGACACAG
GTTATTTTGGCAGCTAATGACTTGCCTTCTATTAACGATGTTACTTACCCTGAGTTGGTA
GAGATAATATCTAAGTTAAAAGATGAGCAGGGGAAGCTTGTAGGTGTGGACACATCCAAC
CTTTTAGTTGCGAATTCTGGAAATGATTTACCAGTTATTGATCTTACGGGAATATCACAA
GAGCTTGCCTACTTGGCAAGCGATGCTGACCTTGTCATTCTGGAAGGCATGGGCCGTGGT
ATAGAGACAAACCTTTATGCTCAATTCAGATGTGATTCCCTGAAGATTGGAATGGTGAAG
CACCCAGAGGTTGTTGAGTTTCTTGGAGGAAGGCTTTATGATTGCGTGTTCAAATATAAC
GAGGTCTTGGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400025872
PEP Infomation

pacid=37437665 transcript=PGSC0003DMT400038080 locus=PGSC0003DMG400014681 ID=PGSC0003DMT400038080.v4.03 annot-version=v4.03
Sequence

MESSGELVPFPLLMTCNYRACTIPYRFPSNNPTKPTPTELSWIHVFMNSIPSFRKRAESD
DTVPDALSRAEKFAHRYTEILEDLKKDPKSHGGPPDGILLCRLREQVLRELGFRDIFKKV
KDEENAKAISLFEDVVHLNDAIEDEAKRMENLVKGIFAGNLFDLGSAQLAELFSRDGISF
LASCQNLVPRPWVIDDLDTFITKWSRESWKKAVIFVDNSGADIILGILPFTRELLRHGTQ
VILAANDLPSINDVTYPELVEIISKLKDEQGKLVGVDTSNLLVANSGNDLPVIDLTGISQ
ELAYLASDADLVILEGMGRGIETNLYAQFRCDSLKIGMVKHPEVVEFLGGRLYDCVFKYN
EVLE*

Transcript Sequence

Transcript ID

PGSC0003DMT400038080
Transcript Infomation

pacid=37437665 locus=PGSC0003DMG400014681 ID=PGSC0003DMT400038080.v4.03 annot-version=v4.03
Sequence

ATGGAGAGCTCCGGGGAATTGGTGCCTTTTCCGTTGCTGATGACTTGCAATTACCGGGCA
TGTACCATCCCTTACAGGTTTCCTTCCAACAATCCCACTAAACCAACGCCCACTGAGCTT
TCCTGGATCCACGTCTTCATGAATTCCATCCCTTCTTTTAGGAAGAGGGCCGAGAGCGAT
GACACTGTTCCAGATGCTCTTTCTCGAGCCGAAAAGTTTGCTCACAGGTACACTGAAATA
CTCGAGGATTTGAAGAAAGATCCTAAAAGTCACGGAGGGCCTCCTGATGGCATTCTTCTT
TGTCGCCTTAGGGAGCAAGTGCTTAGGGAATTGGGATTCAGAGATATATTTAAAAAAGTT
AAGGACGAAGAAAATGCAAAGGCTATATCCTTATTTGAGGATGTAGTACATCTAAATGAT
GCTATTGAGGATGAAGCTAAGCGTATGGAGAACTTGGTCAAAGGGATTTTTGCAGGAAAC
CTATTTGATCTTGGCTCGGCACAGCTTGCGGAGCTATTTTCAAGGGATGGCATTTCTTTT
TTAGCTAGTTGCCAAAACCTCGTTCCTCGACCTTGGGTTATTGATGACTTGGATACTTTC
ATAACAAAATGGAGCAGAGAATCATGGAAAAAGGCTGTAATCTTTGTGGATAATTCTGGT
GCAGATATTATTCTGGGCATTCTGCCATTTACGAGAGAATTACTTCGTCATGGGACACAG
GTTATTTTGGCAGCTAATGACTTGCCTTCTATTAACGATGTTACTTACCCTGAGTTGGTA
GAGATAATATCTAAGTTAAAAGATGAGCAGGGGAAGCTTGTAGGTGTGGACACATCCAAC
CTTTTAGTTGCGAATTCTGGAAATGATTTACCAGTTATTGATCTTACGGGAATATCACAA
GAGCTTGCCTACTTGGCAAGCGATGCTGACCTTGTCATTCTGGAAGGCATGGGCCGTGGT
ATAGAGACAAACCTTTATGCTCAATTCAGATGTGATTCCCTGAAGATTGGAATGGTGAAG
CACCCAGAGGTTGTTGAGTTTCTTGGAGGAAGGCTTTATGATTGCGTGTTCAAATATAAC
GAGGTCTTGGAATAG