Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038066
CDS Infomation

pacid=37441551 polypeptide=PGSC0003DMP400025859 locus=PGSC0003DMG400014677 ID=PGSC0003DMT400038066.v4.03 annot-version=v4.03
Sequence

ATGTATCATCACTGTAAGATCACTCCTTCTCTATACTTTGTAAATTTTGCTGCTGCAACT
AATCAATGTTACCTGACTTCTCTTCCTCCTATTTTCAGTCGGGGAGAGCTGAAAGGTCTT
TTCCCCTCATATGATTGTCCGCAATGCATTAATAGAAAGGAACATGGTCGAATTAGTGCT
GCTCGTCCTGATGAGAAAAATATTGACATCCTTGTAACATATACTGATGCTAATGGTGCT
GTTAGAACTAGGAGCATAAACTCCAAGGACTTGTCAACTTCATGGGTATGGAGGTATCCT
AGTGATGAGGATGGTGATCACAAGAAGAGTTCCAAGGAAGTGGAAGGGAAGTCTCAGAAA
CCGGATAAACTTGAGGGCACTATTGATCACTCTAATGGAAACAAAAATCAGTATGGAGTT
GTTGTGGAGCATAAATCAGCATCTGAGCTGCATCCAATCAAACTCAAGCGCCAGAGGCTA
AGAAACGAAAGAAGGGAATGGCGGACTGCAGAGCTGATCGAACAAGATAAGGAAATTGAA
AACCAAATTCAAGACGCTGCTGTTGAGCGAGCTAAAGAGCTTGACACAACTAGCAAGGGT
AAATACAATATATGGAGGAAAGAATATGAAAACCCTAATGCTGACTCTACCCTTAAACTT
ATGCGTGACCAAATCATCATGGCAAGAGCGTATGCTACCATTGCAAAAGCTAAGAATGAA
GATTCTCTGTATGATTCTTTGATAAATCATTCTAGAGAAAGCCAGCTTGCAATTGGAGAA
GCCACTTCTGATTCTGAACTTCAACCAAGTGCACTTGACCGAGCAAAGGATATGGGCCAT
GTTTTAGCTGCTGCAAAGGATCAACTATACGATTGCATGACACTAGCAAGGAAACTAAGA
GTCATGCTTCAGTCGGCCGAAACTGGTCTAAATATGCTGAAGAAAAGGAGTGCATTCTTG
ATACAGCTGGCTGCTAAAACTGTTCCCAGGCCTTTGCATTGTCTTCCTTTGCTTCTCACG
ACAGACTTCTTTATACGTCGATATGAAGAGAGAGAATTTCCGAACAAGGAAAAGCTTGAA
GATCCTTCTCTGTTCCATTATGCAATATTTTCTGATAATGTACTTGCCACATCTGTTGTT
GTAAACTCTACTATACTGCATGCGAAGGAGCCTGAAAAGCACGTTTTCCATATAGTGACA
GATAAATTGAACTTCCCAGCTATGAAAATGTGGTTCCTTGTCAATCCTCCTGCTGCTGCA
ACAATTCACGTTGAGAATGTCGATGACTTTACATGGCTAAATTCTACTTACTGCCCTGTA
CTACGTCAGCTTGAATCTGCTAGAATGATAGAGTATTATTTCAAGGCACATCAGTCGAAC
TCCCTTACATCTGGCACCGACAATCTTAAATATAGGAACCCAAAGTATTTGTCAATGCTG
AATCATCTTAGGTTTTACCTTCCTGAAGTATATCCAAAGCTGGAGAAAATCTTATTTCTG
GATGATGATATTGTAGTTCAGAAGGATCTGACACCTCTTTGGTCTGTCAACCTACAAGGG
ATGGTCAATGGTGCCGTGGAGACATGCAAAGAAAGCTTCCATAGATTTGATAAATATCTT
AACTTTTCTAACCCGAAGATATCTGAAAACTTTGATCCAAATGCCTGTGGATGGGCTTTT
GGCATGAATGTCTTTGATTTGAAGGAGTGGAGGAGGCGCAACATTACAGGAATATATCAT
TATTGGCAAGAAAGGAATGAGGATAGAACACTTTGGAAACTTGGCACCTTACCTCCAGGG
TTAATAACTTTCTATAACTTGACTCATCCTTTGGATCGGAGCTGGCATGTCTTGGGTCTT
GGCTATGATCCCGCCTTGAACAAAACAGAAATACAAAATGGGGCAGTTGTTCACTACAAT
GGAAATTACAAACCATGGTTGGATCTTGCAATTGCCAAGTACAAAGCTTATTGGTCTAGA
TATGTAATGTTCAATAATTCATACCTTCAACTTTGTAACATCAGGGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400025859
PEP Infomation

pacid=37441551 transcript=PGSC0003DMT400038066 locus=PGSC0003DMG400014677 ID=PGSC0003DMT400038066.v4.03 annot-version=v4.03
Sequence

MYHHCKITPSLYFVNFAAATNQCYLTSLPPIFSRGELKGLFPSYDCPQCINRKEHGRISA
ARPDEKNIDILVTYTDANGAVRTRSINSKDLSTSWVWRYPSDEDGDHKKSSKEVEGKSQK
PDKLEGTIDHSNGNKNQYGVVVEHKSASELHPIKLKRQRLRNERREWRTAELIEQDKEIE
NQIQDAAVERAKELDTTSKGKYNIWRKEYENPNADSTLKLMRDQIIMARAYATIAKAKNE
DSLYDSLINHSRESQLAIGEATSDSELQPSALDRAKDMGHVLAAAKDQLYDCMTLARKLR
VMLQSAETGLNMLKKRSAFLIQLAAKTVPRPLHCLPLLLTTDFFIRRYEEREFPNKEKLE
DPSLFHYAIFSDNVLATSVVVNSTILHAKEPEKHVFHIVTDKLNFPAMKMWFLVNPPAAA
TIHVENVDDFTWLNSTYCPVLRQLESARMIEYYFKAHQSNSLTSGTDNLKYRNPKYLSML
NHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSVNLQGMVNGAVETCKESFHRFDKYL
NFSNPKISENFDPNACGWAFGMNVFDLKEWRRRNITGIYHYWQERNEDRTLWKLGTLPPG
LITFYNLTHPLDRSWHVLGLGYDPALNKTEIQNGAVVHYNGNYKPWLDLAIAKYKAYWSR
YVMFNNSYLQLCNIRE*

Transcript Sequence

Transcript ID

PGSC0003DMT400038066
Transcript Infomation

pacid=37441551 locus=PGSC0003DMG400014677 ID=PGSC0003DMT400038066.v4.03 annot-version=v4.03
Sequence

ATGTATCATCACTGTAAGATCACTCCTTCTCTATACTTTGTAAATTTTGCTGCTGCAACT
AATCAATGTTACCTGACTTCTCTTCCTCCTATTTTCAGTCGGGGAGAGCTGAAAGGTCTT
TTCCCCTCATATGATTGTCCGCAATGCATTAATAGAAAGGAACATGGTCGAATTAGTGCT
GCTCGTCCTGATGAGAAAAATATTGACATCCTTGTAACATATACTGATGCTAATGGTGCT
GTTAGAACTAGGAGCATAAACTCCAAGGACTTGTCAACTTCATGGGTATGGAGGTATCCT
AGTGATGAGGATGGTGATCACAAGAAGAGTTCCAAGGAAGTGGAAGGGAAGTCTCAGAAA
CCGGATAAACTTGAGGGCACTATTGATCACTCTAATGGAAACAAAAATCAGTATGGAGTT
GTTGTGGAGCATAAATCAGCATCTGAGCTGCATCCAATCAAACTCAAGCGCCAGAGGCTA
AGAAACGAAAGAAGGGAATGGCGGACTGCAGAGCTGATCGAACAAGATAAGGAAATTGAA
AACCAAATTCAAGACGCTGCTGTTGAGCGAGCTAAAGAGCTTGACACAACTAGCAAGGGT
AAATACAATATATGGAGGAAAGAATATGAAAACCCTAATGCTGACTCTACCCTTAAACTT
ATGCGTGACCAAATCATCATGGCAAGAGCGTATGCTACCATTGCAAAAGCTAAGAATGAA
GATTCTCTGTATGATTCTTTGATAAATCATTCTAGAGAAAGCCAGCTTGCAATTGGAGAA
GCCACTTCTGATTCTGAACTTCAACCAAGTGCACTTGACCGAGCAAAGGATATGGGCCAT
GTTTTAGCTGCTGCAAAGGATCAACTATACGATTGCATGACACTAGCAAGGAAACTAAGA
GTCATGCTTCAGTCGGCCGAAACTGGTCTAAATATGCTGAAGAAAAGGAGTGCATTCTTG
ATACAGCTGGCTGCTAAAACTGTTCCCAGGCCTTTGCATTGTCTTCCTTTGCTTCTCACG
ACAGACTTCTTTATACGTCGATATGAAGAGAGAGAATTTCCGAACAAGGAAAAGCTTGAA
GATCCTTCTCTGTTCCATTATGCAATATTTTCTGATAATGTACTTGCCACATCTGTTGTT
GTAAACTCTACTATACTGCATGCGAAGGAGCCTGAAAAGCACGTTTTCCATATAGTGACA
GATAAATTGAACTTCCCAGCTATGAAAATGTGGTTCCTTGTCAATCCTCCTGCTGCTGCA
ACAATTCACGTTGAGAATGTCGATGACTTTACATGGCTAAATTCTACTTACTGCCCTGTA
CTACGTCAGCTTGAATCTGCTAGAATGATAGAGTATTATTTCAAGGCACATCAGTCGAAC
TCCCTTACATCTGGCACCGACAATCTTAAATATAGGAACCCAAAGTATTTGTCAATGCTG
AATCATCTTAGGTTTTACCTTCCTGAAGTATATCCAAAGCTGGAGAAAATCTTATTTCTG
GATGATGATATTGTAGTTCAGAAGGATCTGACACCTCTTTGGTCTGTCAACCTACAAGGG
ATGGTCAATGGTGCCGTGGAGACATGCAAAGAAAGCTTCCATAGATTTGATAAATATCTT
AACTTTTCTAACCCGAAGATATCTGAAAACTTTGATCCAAATGCCTGTGGATGGGCTTTT
GGCATGAATGTCTTTGATTTGAAGGAGTGGAGGAGGCGCAACATTACAGGAATATATCAT
TATTGGCAAGAAAGGAATGAGGATAGAACACTTTGGAAACTTGGCACCTTACCTCCAGGG
TTAATAACTTTCTATAACTTGACTCATCCTTTGGATCGGAGCTGGCATGTCTTGGGTCTT
GGCTATGATCCCGCCTTGAACAAAACAGAAATACAAAATGGGGCAGTTGTTCACTACAAT
GGAAATTACAAACCATGGTTGGATCTTGCAATTGCCAAGTACAAAGCTTATTGGTCTAGA
TATGTAATGTTCAATAATTCATACCTTCAACTTTGTAACATCAGGGAATAG