Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400038058
CDS Infomation

pacid=37436645 polypeptide=PGSC0003DMP400025853 locus=PGSC0003DMG400014674 ID=PGSC0003DMT400038058.v4.03 annot-version=v4.03
Sequence

ATGGCGCTAAATCTTCGTCAAAAGCAAACTGAGTGTATTACGCGGATGTTAAATCTGAAC
CAGCCGGTGAACGCCGGTGCCACTGCCAATGAGGAGGTATACAAGATCCTGATTTACGAT
CGATTCTGCCAAGACATTTTATCCCCTTTGATTCACGTCAAGGACCTCCGTAAACACGGC
GTTACCCTCTACTTCCTTATCGATAAGGATCGCAAGCCCGTCCATGATGTTCCTGCTGTC
TACTTCGTCCAACCCACCCATCTTAATGTACAGCGTATCGTTGCTGATGCCTCCAAGTCT
CTTTATGATTCCTTCCATTTGAACTTCTCCTCTTCTATTCCCAGGCCCTTGCTCGAAGAT
CTCGCTTCAGGCACGATTAATTCTGACTCGATTGAAAGGATCTCTAAAGTGCATGATCAG
TACTTGGAGTTTGTCACGCTTGAGGATAATTTGTTCTCACTTGCCTACAAGAACTGTTAT
CTTCAACTGAATGATCCCTCTGCTGGGGATAAAGAAATTGAAGAGATCATTGAAAAGATT
GTCAGTGGCTTATTTTGTGTGTTGGCTACTCTTGCTGTTGTCCCTATCATCAGGTGTCCC
CGTGGTGGGCCTGCTGAGATGGTGGCATCCCTGTTGGATCAGCGTTTGAGAGACCATCTG
TTAGCTAAAAACAATTTATTCTCTGAGGCTGGGAATTTCACTAGCTCATTTCAGAGGCCA
ATTTTGTGTTTATTCGATAGGAACTTTGAGTTGTCAGTAGCTATACAACATGATTTTAGG
TATAGACCACTTGTTCATGATGTGCTTGGTTTGAGATTGAACAGGTTGAGTGTGCAGGGA
GAGAAAAGTGGGATGAAATCATTTGAGTTGGACAGATCTGATCCATTCTGGGTGGCAAAT
TGGTCGTTGGAGTTTCCAGAGGTTGCTTTGGAGATAGAAGCTCAGTTGAACAAGTATAAG
AAGGATGTGGAGGAGGTAAATAAACGAACTGGTGGGAACTCAGGGGCTGAGTTTGATGGG
ACAGACTTGGTTGGCAATACCAAGCATTTGATGAATGCAGTAAATTCCCTGCCTGAGTTG
ACAGAGAGAAAACAAGTCATTGATAAGCACACCAATATTGCTACAGCATTGTTAGGTGAG
ATCAAGGAGAGGTCCCTTGATTCGTATGCCAAAAAGGAGAATGATATGATGGTAAGAGGT
GTCATTGATCGCAGTGAGCTCATCGGAGCTCTCAAGGGAAAAGGGACTAAGGTGGATAAG
CTGCGGTTTGCTATCATGTATCTTATCTCAACTGAAAGCTTACCTCAATCAGAAGTTGAA
ATGATTGAAACAGCACTTAGGGAGTCTGAGGTTGATACCACAGCATTTCAGTATGTAAAG
AAGATAAAATCATTGAATGTCTCTTTAGCATCAGCAAATTCTGCGAGTAGGAGCAACATT
GTTGATTGGGCTGAAAAGCTCTATGGGCAGTCAATCAGTGCTGTAACTGCAGGTGTCAAA
AATCTACTATCCAGTGATCATCAGTTGGCTTTGTCAAGAACAGTAGAAGCATTAATGGAG
GGGAAACCCAATCCAGAAATTGATTCTTATATTATTTTTGATCCTCGTGCACCCAAGTCA
AGCTCCGGGATGAGCAGCAGTCACCTGAAAGGACCATTTAAAGAAGCTATTGTCTTTATG
ATAGGTGGTGGTAACTATGTGGAGTATGGAAGCTTGCAAGAGCTAGCCAATCGTCAACAG
CCAGTTAAGCATGTTATATACGGGACGACAGAAATTCTTACAGGAGGTGAGTTCATCGAG
CAGCTTGCACTGCTGGGGCAGAAGATGGGATTGGGAACTAGTGTCACAACACCAGCCCAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400025853
PEP Infomation

pacid=37436645 transcript=PGSC0003DMT400038058 locus=PGSC0003DMG400014674 ID=PGSC0003DMT400038058.v4.03 annot-version=v4.03
Sequence

MALNLRQKQTECITRMLNLNQPVNAGATANEEVYKILIYDRFCQDILSPLIHVKDLRKHG
VTLYFLIDKDRKPVHDVPAVYFVQPTHLNVQRIVADASKSLYDSFHLNFSSSIPRPLLED
LASGTINSDSIERISKVHDQYLEFVTLEDNLFSLAYKNCYLQLNDPSAGDKEIEEIIEKI
VSGLFCVLATLAVVPIIRCPRGGPAEMVASLLDQRLRDHLLAKNNLFSEAGNFTSSFQRP
ILCLFDRNFELSVAIQHDFRYRPLVHDVLGLRLNRLSVQGEKSGMKSFELDRSDPFWVAN
WSLEFPEVALEIEAQLNKYKKDVEEVNKRTGGNSGAEFDGTDLVGNTKHLMNAVNSLPEL
TERKQVIDKHTNIATALLGEIKERSLDSYAKKENDMMVRGVIDRSELIGALKGKGTKVDK
LRFAIMYLISTESLPQSEVEMIETALRESEVDTTAFQYVKKIKSLNVSLASANSASRSNI
VDWAEKLYGQSISAVTAGVKNLLSSDHQLALSRTVEALMEGKPNPEIDSYIIFDPRAPKS
SSGMSSSHLKGPFKEAIVFMIGGGNYVEYGSLQELANRQQPVKHVIYGTTEILTGGEFIE
QLALLGQKMGLGTSVTTPAH*

Transcript Sequence

Transcript ID

PGSC0003DMT400038058
Transcript Infomation

pacid=37436645 locus=PGSC0003DMG400014674 ID=PGSC0003DMT400038058.v4.03 annot-version=v4.03
Sequence

ATGGCGCTAAATCTTCGTCAAAAGCAAACTGAGTGTATTACGCGGATGTTAAATCTGAAC
CAGCCGGTGAACGCCGGTGCCACTGCCAATGAGGAGGTATACAAGATCCTGATTTACGAT
CGATTCTGCCAAGACATTTTATCCCCTTTGATTCACGTCAAGGACCTCCGTAAACACGGC
GTTACCCTCTACTTCCTTATCGATAAGGATCGCAAGCCCGTCCATGATGTTCCTGCTGTC
TACTTCGTCCAACCCACCCATCTTAATGTACAGCGTATCGTTGCTGATGCCTCCAAGTCT
CTTTATGATTCCTTCCATTTGAACTTCTCCTCTTCTATTCCCAGGCCCTTGCTCGAAGAT
CTCGCTTCAGGCACGATTAATTCTGACTCGATTGAAAGGATCTCTAAAGTGCATGATCAG
TACTTGGAGTTTGTCACGCTTGAGGATAATTTGTTCTCACTTGCCTACAAGAACTGTTAT
CTTCAACTGAATGATCCCTCTGCTGGGGATAAAGAAATTGAAGAGATCATTGAAAAGATT
GTCAGTGGCTTATTTTGTGTGTTGGCTACTCTTGCTGTTGTCCCTATCATCAGGTGTCCC
CGTGGTGGGCCTGCTGAGATGGTGGCATCCCTGTTGGATCAGCGTTTGAGAGACCATCTG
TTAGCTAAAAACAATTTATTCTCTGAGGCTGGGAATTTCACTAGCTCATTTCAGAGGCCA
ATTTTGTGTTTATTCGATAGGAACTTTGAGTTGTCAGTAGCTATACAACATGATTTTAGG
TATAGACCACTTGTTCATGATGTGCTTGGTTTGAGATTGAACAGGTTGAGTGTGCAGGGA
GAGAAAAGTGGGATGAAATCATTTGAGTTGGACAGATCTGATCCATTCTGGGTGGCAAAT
TGGTCGTTGGAGTTTCCAGAGGTTGCTTTGGAGATAGAAGCTCAGTTGAACAAGTATAAG
AAGGATGTGGAGGAGGTAAATAAACGAACTGGTGGGAACTCAGGGGCTGAGTTTGATGGG
ACAGACTTGGTTGGCAATACCAAGCATTTGATGAATGCAGTAAATTCCCTGCCTGAGTTG
ACAGAGAGAAAACAAGTCATTGATAAGCACACCAATATTGCTACAGCATTGTTAGGTGAG
ATCAAGGAGAGGTCCCTTGATTCGTATGCCAAAAAGGAGAATGATATGATGGTAAGAGGT
GTCATTGATCGCAGTGAGCTCATCGGAGCTCTCAAGGGAAAAGGGACTAAGGTGGATAAG
CTGCGGTTTGCTATCATGTATCTTATCTCAACTGAAAGCTTACCTCAATCAGAAGTTGAA
ATGATTGAAACAGCACTTAGGGAGTCTGAGGTTGATACCACAGCATTTCAGTATGTAAAG
AAGATAAAATCATTGAATGTCTCTTTAGCATCAGCAAATTCTGCGAGTAGGAGCAACATT
GTTGATTGGGCTGAAAAGCTCTATGGGCAGTCAATCAGTGCTGTAACTGCAGGTGTCAAA
AATCTACTATCCAGTGATCATCAGTTGGCTTTGTCAAGAACAGTAGAAGCATTAATGGAG
GGGAAACCCAATCCAGAAATTGATTCTTATATTATTTTTGATCCTCGTGCACCCAAGTCA
AGCTCCGGGATGAGCAGCAGTCACCTGAAAGGACCATTTAAAGAAGCTATTGTCTTTATG
ATAGGTGGTGGTAACTATGTGGAGTATGGAAGCTTGCAAGAGCTAGCCAATCGTCAACAG
CCAGTTAAGCATGTTATATACGGGACGACAGAAATTCTTACAGGAGGTGAGTTCATCGAG
CAGCTTGCACTGCTGGGGCAGAAGATGGGATTGGGAACTAGTGTCACAACACCAGCCCAT
TAA