Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037950
CDS Infomation

pacid=37453617 polypeptide=PGSC0003DMP400025789 locus=PGSC0003DMG400014638 ID=PGSC0003DMT400037950.v4.03 annot-version=v4.03
Sequence

ATGGAGGGGACGATTAGATGCTCTGCAAATTACGTTCCGTTGAGTCCAATAAGCTTTTTG
TTAAGATCAGGTGTGGTATACAGCAACAGAATTTCTATTGTTTATGGCGATGTTAAGTTT
ACTTGGGCGGAGACAAGACGAAGGTGTTTACAACTTGCTTCTGCTTTTACCCATTTTGGG
ATTTCTCGGGGCGATGTCGTTGCTGTTTTGGCTCCAAATATTCCTGCAATATATGAGCTA
CACTTTGCGGTACCAATGGCTGGGGCAGTTCTTTGTACTCTCAATGTTCGTCATGATTCA
GCAATGGTCTCGGTTTTACTCAAACATTCAGAGGCAAAAGTCATACTTGTAGATTACCAG
TTCCTTGATGTTGCTAACGGGGCGTTACAGATTCTTTCGAAGGAAAATATTAAATTGCCT
CATCTAATCCTAATCCCCGACTGTGACAAACGCTCATCGAATTCTCATATTATGGAATAC
GAGGCCTTTTTAGCTACGGGAAGGCCTAATTTTGAGGTAGTATGGCCAAATGATGAGTGG
GATCCCATTTCCCTGAATTATACTTCAGGTACAACGTCGAGTCCAAAGGGTGTCGTCTAT
AGTCATAGAGGAGCATATCTTAATTCTCTGTCAGCTGTTCTTCTCAATGAAATGCCTTCA
ATGCCCGTCTACTTATGGACAGTTCCGATGTTTCATTGCAACGGATGGTGCCTTACATGG
GCCGTGGCAGCACAGGGTGGCACGAATATTTGTCTTAGGAATGTTACTGCTGAAGGAATT
TTTACAAGCATAGATAGGCACCAAGTGAGTCACATGGGTGGTGCACCTACAGTTTTAAAC
ATGATAATACACGCACCTCCTAGTATCCGTAGGCCACTTCCAAGGAAAGTAGCAGTGATG
ACCGGCGGTGCACCACCTCCTCCTCAAGTTTTATTTATGATGGATGAACTTGGTTTTAAT
GTTACTCACTCATATGGTCTAACGGAAACATATGGTCCTGGAACTGTTTGCACTTGGAAA
CCTGAATGGAGTTCTCTGTCACGTGATGAGCAGGCGAAAATCAAGGCTCGTCAAGGGTTG
CATCATATTGGTATGGAGGAAGTAGATGTGAAGGATCCAGCTTCAATGAAGAGCGTATCA
CCCGATGCAAAAACAATGGGTGAGGTAATGTTTAGAGGAAATGTTGTAATGAATGGGTAC
TTGAAGAATGCCAAAGCAACAGAAGAAGCTTTTAAAGGGGGTTGGTTTCGAACTGGGGAC
TTGGCTGTGAAGCACCCCGATGGTTACATCGAATTGAAGGATCGTGCTAAGGACATCATT
ATATCTGGTGGAGAAAACATTAGTACAATTGAGGTGGAATCAGTACTATTCAGCCATCCA
TCTGTTCTCGACGCTGCTGTAGTAGGAAGACCAGATGATTACTGGGGTGAGACATCTTGT
GCCTTTGTGAAACTAAAGGAGGGTAACAATGCAACTATGGATGAAATCATCAAGTATTGT
CGTGATCGTTTACCACATTACATGGCTCCGAAAACAGTAATTTTCGATGATTTGCCCAAA
ACATCTACAGGAAAGACACAAAAATTTGTTTTGAGACAGAGGGCCAAAGCTATGGGGAGT
ATTACAAAGGCAGCTAGCAAATTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400025789
PEP Infomation

pacid=37453617 transcript=PGSC0003DMT400037950 locus=PGSC0003DMG400014638 ID=PGSC0003DMT400037950.v4.03 annot-version=v4.03
Sequence

MEGTIRCSANYVPLSPISFLLRSGVVYSNRISIVYGDVKFTWAETRRRCLQLASAFTHFG
ISRGDVVAVLAPNIPAIYELHFAVPMAGAVLCTLNVRHDSAMVSVLLKHSEAKVILVDYQ
FLDVANGALQILSKENIKLPHLILIPDCDKRSSNSHIMEYEAFLATGRPNFEVVWPNDEW
DPISLNYTSGTTSSPKGVVYSHRGAYLNSLSAVLLNEMPSMPVYLWTVPMFHCNGWCLTW
AVAAQGGTNICLRNVTAEGIFTSIDRHQVSHMGGAPTVLNMIIHAPPSIRRPLPRKVAVM
TGGAPPPPQVLFMMDELGFNVTHSYGLTETYGPGTVCTWKPEWSSLSRDEQAKIKARQGL
HHIGMEEVDVKDPASMKSVSPDAKTMGEVMFRGNVVMNGYLKNAKATEEAFKGGWFRTGD
LAVKHPDGYIELKDRAKDIIISGGENISTIEVESVLFSHPSVLDAAVVGRPDDYWGETSC
AFVKLKEGNNATMDEIIKYCRDRLPHYMAPKTVIFDDLPKTSTGKTQKFVLRQRAKAMGS
ITKAASKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400037950
Transcript Infomation

pacid=37453617 locus=PGSC0003DMG400014638 ID=PGSC0003DMT400037950.v4.03 annot-version=v4.03
Sequence

ATGGAGGGGACGATTAGATGCTCTGCAAATTACGTTCCGTTGAGTCCAATAAGCTTTTTG
TTAAGATCAGGTGTGGTATACAGCAACAGAATTTCTATTGTTTATGGCGATGTTAAGTTT
ACTTGGGCGGAGACAAGACGAAGGTGTTTACAACTTGCTTCTGCTTTTACCCATTTTGGG
ATTTCTCGGGGCGATGTCGTTGCTGTTTTGGCTCCAAATATTCCTGCAATATATGAGCTA
CACTTTGCGGTACCAATGGCTGGGGCAGTTCTTTGTACTCTCAATGTTCGTCATGATTCA
GCAATGGTCTCGGTTTTACTCAAACATTCAGAGGCAAAAGTCATACTTGTAGATTACCAG
TTCCTTGATGTTGCTAACGGGGCGTTACAGATTCTTTCGAAGGAAAATATTAAATTGCCT
CATCTAATCCTAATCCCCGACTGTGACAAACGCTCATCGAATTCTCATATTATGGAATAC
GAGGCCTTTTTAGCTACGGGAAGGCCTAATTTTGAGGTAGTATGGCCAAATGATGAGTGG
GATCCCATTTCCCTGAATTATACTTCAGGTACAACGTCGAGTCCAAAGGGTGTCGTCTAT
AGTCATAGAGGAGCATATCTTAATTCTCTGTCAGCTGTTCTTCTCAATGAAATGCCTTCA
ATGCCCGTCTACTTATGGACAGTTCCGATGTTTCATTGCAACGGATGGTGCCTTACATGG
GCCGTGGCAGCACAGGGTGGCACGAATATTTGTCTTAGGAATGTTACTGCTGAAGGAATT
TTTACAAGCATAGATAGGCACCAAGTGAGTCACATGGGTGGTGCACCTACAGTTTTAAAC
ATGATAATACACGCACCTCCTAGTATCCGTAGGCCACTTCCAAGGAAAGTAGCAGTGATG
ACCGGCGGTGCACCACCTCCTCCTCAAGTTTTATTTATGATGGATGAACTTGGTTTTAAT
GTTACTCACTCATATGGTCTAACGGAAACATATGGTCCTGGAACTGTTTGCACTTGGAAA
CCTGAATGGAGTTCTCTGTCACGTGATGAGCAGGCGAAAATCAAGGCTCGTCAAGGGTTG
CATCATATTGGTATGGAGGAAGTAGATGTGAAGGATCCAGCTTCAATGAAGAGCGTATCA
CCCGATGCAAAAACAATGGGTGAGGTAATGTTTAGAGGAAATGTTGTAATGAATGGGTAC
TTGAAGAATGCCAAAGCAACAGAAGAAGCTTTTAAAGGGGGTTGGTTTCGAACTGGGGAC
TTGGCTGTGAAGCACCCCGATGGTTACATCGAATTGAAGGATCGTGCTAAGGACATCATT
ATATCTGGTGGAGAAAACATTAGTACAATTGAGGTGGAATCAGTACTATTCAGCCATCCA
TCTGTTCTCGACGCTGCTGTAGTAGGAAGACCAGATGATTACTGGGGTGAGACATCTTGT
GCCTTTGTGAAACTAAAGGAGGGTAACAATGCAACTATGGATGAAATCATCAAGTATTGT
CGTGATCGTTTACCACATTACATGGCTCCGAAAACAGTAATTTTCGATGATTTGCCCAAA
ACATCTACAGGAAAGACACAAAAATTTGTTTTGAGACAGAGGGCCAAAGCTATGGGGAGT
ATTACAAAGGCAGCTAGCAAATTATAA