Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037893
CDS Infomation

pacid=37467875 polypeptide=PGSC0003DMP400025751 locus=PGSC0003DMG401014619 ID=PGSC0003DMT400037893.v4.03 annot-version=v4.03
Sequence

ATGGAACCAAATCACACAAAATCTAGTGACAGTTATGCTGCTGATATCTCTTCCATCAGG
GAAGCTCAAGTACGCATCAAGCCCTTTGCGCAACAAACTCCTGTGCTCACCTCAGACACT
TTAGATTCTATTGCTGGAAGAAAGTTGTACTTCAAATGTGAATGCTTTCAGAAGGGGGGA
GCTTTTAAATTCCGAGGGGCATGCAATGCTATTTTTTCACTTGATGATGATCAGGCCACT
AAAGGAGTTGTAACTCATAGCAGTGGAAATCATGCTGCAGCTCTTTCTTTGGCTGCAAAA
CTACGGGGCATCCCTGCATATATAGTTATACCAAAAGATGCTCCAAAATGCAAAGTCGCG
AATGTCAAACGTTACGGTGGTCATGTTATCGTCAGTGAGCCATCAATGCAGTCCCGGGAA
GATACTGCAAACAAGGTGTTGCAAGATACCGGTGCTGTTCTTATTTCTTCCTCTAATGAT
GGGCGCATTATAAGTGGGCAGGGTACAATATCTCTGGAATTTCTGGAACAGGCTTCGGAA
ATTGACACTTTAATAGTCCCAATCAGCGGAGGTGGTATGATATCAGGAGTTGCATTGGCT
GCCAAGGCTATCAACCCTACCATTCGCATTTTGGCTGCCGAACCAATGGGAGCAAATGAT
GCTTTCCAATCAAAGAGTAATGGTAGGATCACTAAGTTATCTGAAGTCAACACTATTGCT
GATGGCCTTCGAGCTTTTCTTGGAGATCTCACGTGGCCTATTGTCCGCGATCTCGTGGAT
GACGTCATAGTTGTTGATGATAAGGAGATAATACAAGCTATGAAACTTTGCTATGAAGTT
CTGAAGATTGCAGTGGAACCAAGTGGAGCTATAGGCCTTGCAGCTGTTCTTTCCGATGGT
TTCCAAAAAAATCCAGTCTATAGTGAATGCAATCATATTGGAATTGTTCTCTCCGGAGGA
AATGTTGATCTTGGTGTGCTATGGAATTCCTTTGATAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400025751
PEP Infomation

pacid=37467875 transcript=PGSC0003DMT400037893 locus=PGSC0003DMG401014619 ID=PGSC0003DMT400037893.v4.03 annot-version=v4.03
Sequence

MEPNHTKSSDSYAADISSIREAQVRIKPFAQQTPVLTSDTLDSIAGRKLYFKCECFQKGG
AFKFRGACNAIFSLDDDQATKGVVTHSSGNHAAALSLAAKLRGIPAYIVIPKDAPKCKVA
NVKRYGGHVIVSEPSMQSREDTANKVLQDTGAVLISSSNDGRIISGQGTISLEFLEQASE
IDTLIVPISGGGMISGVALAAKAINPTIRILAAEPMGANDAFQSKSNGRITKLSEVNTIA
DGLRAFLGDLTWPIVRDLVDDVIVVDDKEIIQAMKLCYEVLKIAVEPSGAIGLAAVLSDG
FQKNPVYSECNHIGIVLSGGNVDLGVLWNSFDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400037893
Transcript Infomation

pacid=37467875 locus=PGSC0003DMG401014619 ID=PGSC0003DMT400037893.v4.03 annot-version=v4.03
Sequence

ATGGAACCAAATCACACAAAATCTAGTGACAGTTATGCTGCTGATATCTCTTCCATCAGG
GAAGCTCAAGTACGCATCAAGCCCTTTGCGCAACAAACTCCTGTGCTCACCTCAGACACT
TTAGATTCTATTGCTGGAAGAAAGTTGTACTTCAAATGTGAATGCTTTCAGAAGGGGGGA
GCTTTTAAATTCCGAGGGGCATGCAATGCTATTTTTTCACTTGATGATGATCAGGCCACT
AAAGGAGTTGTAACTCATAGCAGTGGAAATCATGCTGCAGCTCTTTCTTTGGCTGCAAAA
CTACGGGGCATCCCTGCATATATAGTTATACCAAAAGATGCTCCAAAATGCAAAGTCGCG
AATGTCAAACGTTACGGTGGTCATGTTATCGTCAGTGAGCCATCAATGCAGTCCCGGGAA
GATACTGCAAACAAGGTGTTGCAAGATACCGGTGCTGTTCTTATTTCTTCCTCTAATGAT
GGGCGCATTATAAGTGGGCAGGGTACAATATCTCTGGAATTTCTGGAACAGGCTTCGGAA
ATTGACACTTTAATAGTCCCAATCAGCGGAGGTGGTATGATATCAGGAGTTGCATTGGCT
GCCAAGGCTATCAACCCTACCATTCGCATTTTGGCTGCCGAACCAATGGGAGCAAATGAT
GCTTTCCAATCAAAGAGTAATGGTAGGATCACTAAGTTATCTGAAGTCAACACTATTGCT
GATGGCCTTCGAGCTTTTCTTGGAGATCTCACGTGGCCTATTGTCCGCGATCTCGTGGAT
GACGTCATAGTTGTTGATGATAAGGAGATAATACAAGCTATGAAACTTTGCTATGAAGTT
CTGAAGATTGCAGTGGAACCAAGTGGAGCTATAGGCCTTGCAGCTGTTCTTTCCGATGGT
TTCCAAAAAAATCCAGTCTATAGTGAATGCAATCATATTGGAATTGTTCTCTCCGGAGGA
AATGTTGATCTTGGTGTGCTATGGAATTCCTTTGATAAATGA