Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037859
CDS Infomation

pacid=37443329 polypeptide=PGSC0003DMP400025726 locus=PGSC0003DMG400014604 ID=PGSC0003DMT400037859.v4.03 annot-version=v4.03
Sequence

ATGTCAGTTGCTTGCGGAATTGAGTGTGTATTGGTAGTTGGTTGTATCCGTTGGGCATGG
AAGCGCTGCACCTACATCGGAAATAACGACAGTGCCACGTGGCCGGCAGCTACCTGTGAG
GAATTCGAGCCAGTTCCCCGTCTCTGCCGTACAATTTTAGCTGTATACGAACCAAATCTC
CATAAACCCAAATTCCCACCGCCGGGCGGGTACCGGTTAAACCCGGATTGGGTTGTAAAA
CGGGTCACGTATGAACAAACCTCCGGCCAGGCACCGCCGTATTTGATCTACTGTGATCAC
GAGCATCAGGAGATTGTGCTTGCTATTAGGGGCTTGAATTTACTGAGTGAAAGTGATTAC
AAAGTATTGTTGGATAATAAGTTGGGGAAACAGATGTTTGATGGTGGGTATGTACATCAT
GGGTTGTTGAAATCTGCTATTTGGGTTTTGAATAATGAGTCTGAAACTTTGAGTAAGCTT
TGGATTGACAATGGAAGGAGCTACAAAATGATATTTGCAGGGCATTCTTTGGGTTCTGGT
GTGGCGTCGTTGCTAACAATAATTGTGGTGAATCATAAAGATAGGTTAGGCGGGGTTCCA
AGGAATCTTGTTAGGTGTTATGCAGTTGCACCAGCAAGATGTATGTCACTCAACTTGGCT
GTTAAGTATGCTGATGTAATACACTCAGTCATATTGCAGGATGATTTCCTGCCAAGAACA
GACACACCACTTGAAGATATATTTAAATCCATCTTCTGTTTACCCTGCCTGATATTTTTG
ATATGCTTGAGAGATACCTTCATCCCTGAGGGCAGAAAACTCCGAGATCCAAGAAGACTT
TATGCGCCTGGCCGAATGTATCATATTGTAGAAAGAAGATTTTGCAGATGTGGGAGGTAC
CCTCCAGATGTTAGAACTGCAATCCCCGTTGACGGAAGATTTGAACAGATTGTGTTGTCA
TGCAACTCTCTATACGATCATGGGATCATTTCGATAGAAAAAGAATCTGAAAAGGCATTT
GCAAGACTTAAAGAGGCTAGTGCGGAGACCACCACTTCTCCCCCTAAAGTGCAGAGAATT
GAAAGACTGAAGACATTAGAAAAAGAGCACAAGGATGCAATCGAAAGAGCCGTCAGTTTA
AATATACCACACGCTGTGGGTGTAGGGGAAGAGGAATCCTCAACACAAAAAGAGGAAGAA
CCCATGGAGGATATAACTTTTGAGGCATCTCAAAAACACGATGAAGATGCATCCACAAGC
GAAGCCCAGGGAAGTGATGGAAGAACTAACTGGCATAAAGTAGTTGAAAAGCTTTTCATT
AGAGACGAATCTGGGAAATTACGATTAAAAAGAGAATCAACTGGTCCCGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025726
PEP Infomation

pacid=37443329 transcript=PGSC0003DMT400037859 locus=PGSC0003DMG400014604 ID=PGSC0003DMT400037859.v4.03 annot-version=v4.03
Sequence

MSVACGIECVLVVGCIRWAWKRCTYIGNNDSATWPAATCEEFEPVPRLCRTILAVYEPNL
HKPKFPPPGGYRLNPDWVVKRVTYEQTSGQAPPYLIYCDHEHQEIVLAIRGLNLLSESDY
KVLLDNKLGKQMFDGGYVHHGLLKSAIWVLNNESETLSKLWIDNGRSYKMIFAGHSLGSG
VASLLTIIVVNHKDRLGGVPRNLVRCYAVAPARCMSLNLAVKYADVIHSVILQDDFLPRT
DTPLEDIFKSIFCLPCLIFLICLRDTFIPEGRKLRDPRRLYAPGRMYHIVERRFCRCGRY
PPDVRTAIPVDGRFEQIVLSCNSLYDHGIISIEKESEKAFARLKEASAETTTSPPKVQRI
ERLKTLEKEHKDAIERAVSLNIPHAVGVGEEESSTQKEEEPMEDITFEASQKHDEDASTS
EAQGSDGRTNWHKVVEKLFIRDESGKLRLKRESTGPE*

Transcript Sequence

Transcript ID

PGSC0003DMT400037859
Transcript Infomation

pacid=37443329 locus=PGSC0003DMG400014604 ID=PGSC0003DMT400037859.v4.03 annot-version=v4.03
Sequence

ATGTCAGTTGCTTGCGGAATTGAGTGTGTATTGGTAGTTGGTTGTATCCGTTGGGCATGG
AAGCGCTGCACCTACATCGGAAATAACGACAGTGCCACGTGGCCGGCAGCTACCTGTGAG
GAATTCGAGCCAGTTCCCCGTCTCTGCCGTACAATTTTAGCTGTATACGAACCAAATCTC
CATAAACCCAAATTCCCACCGCCGGGCGGGTACCGGTTAAACCCGGATTGGGTTGTAAAA
CGGGTCACGTATGAACAAACCTCCGGCCAGGCACCGCCGTATTTGATCTACTGTGATCAC
GAGCATCAGGAGATTGTGCTTGCTATTAGGGGCTTGAATTTACTGAGTGAAAGTGATTAC
AAAGTATTGTTGGATAATAAGTTGGGGAAACAGATGTTTGATGGTGGGTATGTACATCAT
GGGTTGTTGAAATCTGCTATTTGGGTTTTGAATAATGAGTCTGAAACTTTGAGTAAGCTT
TGGATTGACAATGGAAGGAGCTACAAAATGATATTTGCAGGGCATTCTTTGGGTTCTGGT
GTGGCGTCGTTGCTAACAATAATTGTGGTGAATCATAAAGATAGGTTAGGCGGGGTTCCA
AGGAATCTTGTTAGGTGTTATGCAGTTGCACCAGCAAGATGTATGTCACTCAACTTGGCT
GTTAAGTATGCTGATGTAATACACTCAGTCATATTGCAGGATGATTTCCTGCCAAGAACA
GACACACCACTTGAAGATATATTTAAATCCATCTTCTGTTTACCCTGCCTGATATTTTTG
ATATGCTTGAGAGATACCTTCATCCCTGAGGGCAGAAAACTCCGAGATCCAAGAAGACTT
TATGCGCCTGGCCGAATGTATCATATTGTAGAAAGAAGATTTTGCAGATGTGGGAGGTAC
CCTCCAGATGTTAGAACTGCAATCCCCGTTGACGGAAGATTTGAACAGATTGTGTTGTCA
TGCAACTCTCTATACGATCATGGGATCATTTCGATAGAAAAAGAATCTGAAAAGGCATTT
GCAAGACTTAAAGAGGCTAGTGCGGAGACCACCACTTCTCCCCCTAAAGTGCAGAGAATT
GAAAGACTGAAGACATTAGAAAAAGAGCACAAGGATGCAATCGAAAGAGCCGTCAGTTTA
AATATACCACACGCTGTGGGTGTAGGGGAAGAGGAATCCTCAACACAAAAAGAGGAAGAA
CCCATGGAGGATATAACTTTTGAGGCATCTCAAAAACACGATGAAGATGCATCCACAAGC
GAAGCCCAGGGAAGTGATGGAAGAACTAACTGGCATAAAGTAGTTGAAAAGCTTTTCATT
AGAGACGAATCTGGGAAATTACGATTAAAAAGAGAATCAACTGGTCCCGAGTAG