Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037843
CDS Infomation

pacid=37444539 polypeptide=PGSC0003DMP400025712 locus=PGSC0003DMG400014600 ID=PGSC0003DMT400037843.v4.03 annot-version=v4.03
Sequence

ATGATGAATACGATAGGGTGGAAGAGGCAACTACAACATATTGTATTATGGTTTTTTGCA
ATTGTTTTCCATCTTTTCTTGCTTGTTAATGGTTCAAGAACGGACCACTTTAGGCATACT
CCACTAAGAAATAGTCAAAAGTTGGCATCAACTACTCCTCCTGTCAAACTGCTTATCTCA
AGTAATTATGTAGTGATAGATAATGGCATTGTCAAAGTTACCCTAACTAATCCCACTGGA
TCCATTGCTGGGGTGAGCTACAATGGTATTGATAATGTACTAGAGACAGACTTCAAAGAT
ACAAATAGAGGATATTGGGATACAGTGTGGGAACGACCTGGAGACAAAGATCACACTTTT
GACATGCTTTTAGGGACAAAATTCAGAGTCATTGCACAAGACAAAAATAAAGTTGAAGTT
TCTTTTACAAAAACATGGAATCCTTCAAATAATGGTACTACACATGATCTTCCTCTAAAC
ATTGACAAAAGGTTTGTTATGTTGAGGGGAAGTTCTGGATTTTATTCATATGGGATATTT
GAACACTTGAAAGGCTGGCCAAGCTTAATTCTTGAAGAAGCCAGAATTGCCATTAAGCTC
AAAAGGACTCTGTTCCATTATATGGCAATATCAGATGATATTCAAAGGATGATGCCAACA
GATGAAGATCGATCTGATGGGCAAATTCTTGACTATAGAGAAGCTGTTAGACTAACAAAT
CCATCAAATCCTAAACTTAAGGGAGAGGTGGATGACAAGTACCAATATTCATTTGAGAAT
AAGGATATAAAAGTACATGGTTGGGTTTGCAATACTCCACATGTAGGATTTTGGGTTATA
ACACCTAGTTATGAAGATCGTAATGGTGGACCCACCAAGCTAGATCTCACTTCTCATGCT
GGTCCCACCTCTTTAGCGGTATTTTTCAGTGGACATTATGCAGGGCCAGAGTTGGGAGTC
AAAATAAAAGAAGGAGAGCCATGGAAAAAAGTTTTTGGGCCTGTTTTTTTCTACCTTAAC
TCTGATTCTGGTGATAACCATCCTACACTTTGGGAAGATGCTAAAAGACAGATGGAAGAA
GAAACTACAAAATGGCCATATGATTTCCCAGAATCTATTGATTATCCTCATGCTAATGCA
CGTGGTACAATTAGAGGTCAATTATTCGTACGAGACAGGTACATAAACAAAAATCCTGTC
TATGCAAAATCTGCATATATTGGATTAGCACTTCCTGGAGATGTTGGGTCATGGCAATAT
GAGACTAAAGATTATCAATTTTGGACTCAAACAAATGAGACTGGACACTTCAATATTATT
GGTGTTAGACCTGGAACTTATAACTTATATTCTTGGGTCCCTGGAATTATTGGAGATTAC
AAATACCACTATGACATTATTGTCAAACAAGGAAGTGATATAAACTTAGGTAACCTAATT
TATGATCCTCCAAGAAACGGTCCAACTTTATGGGAAATTGGAATTCCTGATAGGAGTGCT
GGAGAATTTTTTGTGCCTGATCCATTGCCTGCCCTAACAAATCAATTATTCAACAATACT
ACACAAAAATATAGGCAATATGGTTTGTGGGATCGATACACTGATTTATATCCAAATAAA
GATTTGGTGTATAAAGTTGGTGTTAGTGATTATAGAAAAGATTGGTTCTTTGCTCATGTA
ACCAGGAGAACTAGAAGCAAGAATTATATACCAACAACATGGCAAATTTCATTTAAACTC
CCAAGTGTTGATCCAAAGGGAACTTATACACTACGTGTGGCACTGGCTTCTGCAACCTAT
TCCCATTTACAGGGGAGGATCAACAACCCCTCTAGAACAATGCCTCACTTTGAAACTCCA
TCAATTGGGAGGAGTAATGCTATAGCTAGACATGGGATACATGGATTATATTGGCTTTTC
AATTTTCAAATTCAAGGATTACAACTACAACAGGGAGAAAATACAATATATTTGATGCAA
ATTAAAGGTGGTAATCCTTTCTATGGCCATCAATACGACTACATTCGTTTGGAAGGCCCT
CCACAACAAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025712
PEP Infomation

pacid=37444539 transcript=PGSC0003DMT400037843 locus=PGSC0003DMG400014600 ID=PGSC0003DMT400037843.v4.03 annot-version=v4.03
Sequence

MMNTIGWKRQLQHIVLWFFAIVFHLFLLVNGSRTDHFRHTPLRNSQKLASTTPPVKLLIS
SNYVVIDNGIVKVTLTNPTGSIAGVSYNGIDNVLETDFKDTNRGYWDTVWERPGDKDHTF
DMLLGTKFRVIAQDKNKVEVSFTKTWNPSNNGTTHDLPLNIDKRFVMLRGSSGFYSYGIF
EHLKGWPSLILEEARIAIKLKRTLFHYMAISDDIQRMMPTDEDRSDGQILDYREAVRLTN
PSNPKLKGEVDDKYQYSFENKDIKVHGWVCNTPHVGFWVITPSYEDRNGGPTKLDLTSHA
GPTSLAVFFSGHYAGPELGVKIKEGEPWKKVFGPVFFYLNSDSGDNHPTLWEDAKRQMEE
ETTKWPYDFPESIDYPHANARGTIRGQLFVRDRYINKNPVYAKSAYIGLALPGDVGSWQY
ETKDYQFWTQTNETGHFNIIGVRPGTYNLYSWVPGIIGDYKYHYDIIVKQGSDINLGNLI
YDPPRNGPTLWEIGIPDRSAGEFFVPDPLPALTNQLFNNTTQKYRQYGLWDRYTDLYPNK
DLVYKVGVSDYRKDWFFAHVTRRTRSKNYIPTTWQISFKLPSVDPKGTYTLRVALASATY
SHLQGRINNPSRTMPHFETPSIGRSNAIARHGIHGLYWLFNFQIQGLQLQQGENTIYLMQ
IKGGNPFYGHQYDYIRLEGPPQQN*

Transcript Sequence

Transcript ID

PGSC0003DMT400037843
Transcript Infomation

pacid=37444539 locus=PGSC0003DMG400014600 ID=PGSC0003DMT400037843.v4.03 annot-version=v4.03
Sequence

ATGATGAATACGATAGGGTGGAAGAGGCAACTACAACATATTGTATTATGGTTTTTTGCA
ATTGTTTTCCATCTTTTCTTGCTTGTTAATGGTTCAAGAACGGACCACTTTAGGCATACT
CCACTAAGAAATAGTCAAAAGTTGGCATCAACTACTCCTCCTGTCAAACTGCTTATCTCA
AGTAATTATGTAGTGATAGATAATGGCATTGTCAAAGTTACCCTAACTAATCCCACTGGA
TCCATTGCTGGGGTGAGCTACAATGGTATTGATAATGTACTAGAGACAGACTTCAAAGAT
ACAAATAGAGGATATTGGGATACAGTGTGGGAACGACCTGGAGACAAAGATCACACTTTT
GACATGCTTTTAGGGACAAAATTCAGAGTCATTGCACAAGACAAAAATAAAGTTGAAGTT
TCTTTTACAAAAACATGGAATCCTTCAAATAATGGTACTACACATGATCTTCCTCTAAAC
ATTGACAAAAGGTTTGTTATGTTGAGGGGAAGTTCTGGATTTTATTCATATGGGATATTT
GAACACTTGAAAGGCTGGCCAAGCTTAATTCTTGAAGAAGCCAGAATTGCCATTAAGCTC
AAAAGGACTCTGTTCCATTATATGGCAATATCAGATGATATTCAAAGGATGATGCCAACA
GATGAAGATCGATCTGATGGGCAAATTCTTGACTATAGAGAAGCTGTTAGACTAACAAAT
CCATCAAATCCTAAACTTAAGGGAGAGGTGGATGACAAGTACCAATATTCATTTGAGAAT
AAGGATATAAAAGTACATGGTTGGGTTTGCAATACTCCACATGTAGGATTTTGGGTTATA
ACACCTAGTTATGAAGATCGTAATGGTGGACCCACCAAGCTAGATCTCACTTCTCATGCT
GGTCCCACCTCTTTAGCGGTATTTTTCAGTGGACATTATGCAGGGCCAGAGTTGGGAGTC
AAAATAAAAGAAGGAGAGCCATGGAAAAAAGTTTTTGGGCCTGTTTTTTTCTACCTTAAC
TCTGATTCTGGTGATAACCATCCTACACTTTGGGAAGATGCTAAAAGACAGATGGAAGAA
GAAACTACAAAATGGCCATATGATTTCCCAGAATCTATTGATTATCCTCATGCTAATGCA
CGTGGTACAATTAGAGGTCAATTATTCGTACGAGACAGGTACATAAACAAAAATCCTGTC
TATGCAAAATCTGCATATATTGGATTAGCACTTCCTGGAGATGTTGGGTCATGGCAATAT
GAGACTAAAGATTATCAATTTTGGACTCAAACAAATGAGACTGGACACTTCAATATTATT
GGTGTTAGACCTGGAACTTATAACTTATATTCTTGGGTCCCTGGAATTATTGGAGATTAC
AAATACCACTATGACATTATTGTCAAACAAGGAAGTGATATAAACTTAGGTAACCTAATT
TATGATCCTCCAAGAAACGGTCCAACTTTATGGGAAATTGGAATTCCTGATAGGAGTGCT
GGAGAATTTTTTGTGCCTGATCCATTGCCTGCCCTAACAAATCAATTATTCAACAATACT
ACACAAAAATATAGGCAATATGGTTTGTGGGATCGATACACTGATTTATATCCAAATAAA
GATTTGGTGTATAAAGTTGGTGTTAGTGATTATAGAAAAGATTGGTTCTTTGCTCATGTA
ACCAGGAGAACTAGAAGCAAGAATTATATACCAACAACATGGCAAATTTCATTTAAACTC
CCAAGTGTTGATCCAAAGGGAACTTATACACTACGTGTGGCACTGGCTTCTGCAACCTAT
TCCCATTTACAGGGGAGGATCAACAACCCCTCTAGAACAATGCCTCACTTTGAAACTCCA
TCAATTGGGAGGAGTAATGCTATAGCTAGACATGGGATACATGGATTATATTGGCTTTTC
AATTTTCAAATTCAAGGATTACAACTACAACAGGGAGAAAATACAATATATTTGATGCAA
ATTAAAGGTGGTAATCCTTTCTATGGCCATCAATACGACTACATTCGTTTGGAAGGCCCT
CCACAACAAAATTAA