Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037779
CDS Infomation

pacid=37442828 polypeptide=PGSC0003DMP400025680 locus=PGSC0003DMG400014576 ID=PGSC0003DMT400037779.v4.03 annot-version=v4.03
Sequence

ATGGCTACTACTACTCTACTCATGAACTTCCATTACACTTTTCTCTCATTCTTCTTCCTC
TTCACCCTTCTTGAATCTTCCCCAAACCCAGATATTGCACCATTACTAGCTTTCAAATCA
GCTTCAGATGAAACAAACTCACTCTATAACTGGAACTCATCAACTCACCCCTGTTCTTGG
ACTGGTGTATCTTGTCTTAACAATAGAGTTTCTAGACTTGTTCTTGAAGGTCTTAATCTA
AAAGGGTCTTTCCAAAATCTTGTATTTCTCAAAGAGTTAAGAGTATTGAGCTTGAAATAT
AACAATTTTTCCGGTTCTGTTCCGAATCTTTCGAACCTTACTGCTTTGAAGCTGCTGTTT
CTTTCCCATAATGAGCTTTCTGGGGAGTTTTCTGAGTCGTTTACCTCGCTTTTTAAGCTT
TATAGACTTGATCTGTCGTATAATAAGTTTTCCGGTGAGATTCCGGCGAAGGTGAATCGT
TTGACCCATTTGCTTACTCTTCGTCTTGAAGGAAATGGGTTTTCCGGTGAGATTTCTGGG
GTTAATCTACCTAATCTTCAAGAGTTTAACGTTTCTGGTAACAAACTCGTTGGAGAAATA
CCCATTTCGCTATCTCGTTTCCCGGAATCTGCATTTTCGAAGAACCGGGTTCTTTGTGGT
TCTCCGTTGCCAAACTGTACGGCGGCGGTTCCTCGTGAACCGTCGTCGTCGGCAGGAGCT
TTAGCTTCTCCGGTTAGTCCTAAAACTACCATTGCATCTTCTCCGAGCTCATTGCCGGTG
ACCTCTGCAACTTTGAGTCCAAAAAATACCCATCATAGTAGTGGTAAAATGAGCTCATTG
GCCATAATCGCCATTATACTAGGTGATGTGTTGGTTCTATGTGTTGTGTGTATTTTTCTC
TACTGTTTCTTCTGCATTAGGAAAGTTTCTTCTCAGAAAAATGGGTCACACATTCTTGAA
GGTGAGAAGATTGTGTACTCGTCTAGCCCGTATCCGAATACGGGCCAGACGAGCGGGTTC
GAGAGAGGGAAAATGGTGTTTTTCGAAGGGGCGAAGAGGTTTGAGCTTGAGGATTTGTTG
AGAGCTTCAGCTGAAATGTTGGGAAAAGGGGGATTTGGGACTGCTTATAAGGCTGTGTTG
GATGATGGAAATGTTGTTGCTGTGAAAAGATTGAAAGAGTTGAATGTTTGTGGGAAAAGA
GAATTTGAGCAACAAATGGAAGTTTTAGGAAGACTTAGACACCCAAATTTGGTTAGTTTG
AAAGCATACTACTTTGCTAGAGATGAGAAGTTGTTGGTGTATGAGTTCATGACTAATGGC
AACTTGTTTTGGCTTCTTCATGGTAACAGAGGGCCTGGAAGAACTCCTTTAGACTGGACA
ACAAGGTTAAAGATTGCAGCCGGAGCAGCTCGAGGTCTAGCCTTCATCCACAACTCATGC
AAGTCCTTGAAACTCACTCATGGCAACATCAAATCAACTAACATCCTCATTGACAAGAGT
GGCAATGCACGTGTCTCCGACTTTGGTCTAGCCATCTTCGCCACACCATCTTCCGTCCCA
AAAACCAATGGCTACCGAGCCCCTGAAGTCGCATTGGATGGTCGTAAAATAACTCAAAAG
TCCGACATCTACTCATTCGGGGTCCTATTACTCGAGCTGCTAACCGGTAAATGCCCCTCA
GTCGTGGACAATGGTAGTGGCCTCACAACCGGCTACGGAGGGGTCGTGGACTTACCGAGA
TGGGTGCAATCCGTGGTGAGGGAAGAATGGACTGCGGAAGTGTTCGATTTGGAGTTGATG
AGGTATAAGGACATTGAGGAGGAAATGGTGGGGCTATTGCAGATAGCTATGGCATGTACT
TCAACATCACCAGATCAAAGGCCTAAAATAAATTATGTTGTGAAAATGATTGAAGAGTTG
AGAGGTGTTGAAGTTTCACCTTCTCATGACACTGCTACTGATTCTGTTTCTGACTCTCCT
GCTGTTTCTGAAGATAATACATGTGGTGCAGCTAGTCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025680
PEP Infomation

pacid=37442828 transcript=PGSC0003DMT400037779 locus=PGSC0003DMG400014576 ID=PGSC0003DMT400037779.v4.03 annot-version=v4.03
Sequence

MATTTLLMNFHYTFLSFFFLFTLLESSPNPDIAPLLAFKSASDETNSLYNWNSSTHPCSW
TGVSCLNNRVSRLVLEGLNLKGSFQNLVFLKELRVLSLKYNNFSGSVPNLSNLTALKLLF
LSHNELSGEFSESFTSLFKLYRLDLSYNKFSGEIPAKVNRLTHLLTLRLEGNGFSGEISG
VNLPNLQEFNVSGNKLVGEIPISLSRFPESAFSKNRVLCGSPLPNCTAAVPREPSSSAGA
LASPVSPKTTIASSPSSLPVTSATLSPKNTHHSSGKMSSLAIIAIILGDVLVLCVVCIFL
YCFFCIRKVSSQKNGSHILEGEKIVYSSSPYPNTGQTSGFERGKMVFFEGAKRFELEDLL
RASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKELNVCGKREFEQQMEVLGRLRHPNLVSL
KAYYFARDEKLLVYEFMTNGNLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHNSC
KSLKLTHGNIKSTNILIDKSGNARVSDFGLAIFATPSSVPKTNGYRAPEVALDGRKITQK
SDIYSFGVLLLELLTGKCPSVVDNGSGLTTGYGGVVDLPRWVQSVVREEWTAEVFDLELM
RYKDIEEEMVGLLQIAMACTSTSPDQRPKINYVVKMIEELRGVEVSPSHDTATDSVSDSP
AVSEDNTCGAASQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400037779
Transcript Infomation

pacid=37442828 locus=PGSC0003DMG400014576 ID=PGSC0003DMT400037779.v4.03 annot-version=v4.03
Sequence

ATGGCTACTACTACTCTACTCATGAACTTCCATTACACTTTTCTCTCATTCTTCTTCCTC
TTCACCCTTCTTGAATCTTCCCCAAACCCAGATATTGCACCATTACTAGCTTTCAAATCA
GCTTCAGATGAAACAAACTCACTCTATAACTGGAACTCATCAACTCACCCCTGTTCTTGG
ACTGGTGTATCTTGTCTTAACAATAGAGTTTCTAGACTTGTTCTTGAAGGTCTTAATCTA
AAAGGGTCTTTCCAAAATCTTGTATTTCTCAAAGAGTTAAGAGTATTGAGCTTGAAATAT
AACAATTTTTCCGGTTCTGTTCCGAATCTTTCGAACCTTACTGCTTTGAAGCTGCTGTTT
CTTTCCCATAATGAGCTTTCTGGGGAGTTTTCTGAGTCGTTTACCTCGCTTTTTAAGCTT
TATAGACTTGATCTGTCGTATAATAAGTTTTCCGGTGAGATTCCGGCGAAGGTGAATCGT
TTGACCCATTTGCTTACTCTTCGTCTTGAAGGAAATGGGTTTTCCGGTGAGATTTCTGGG
GTTAATCTACCTAATCTTCAAGAGTTTAACGTTTCTGGTAACAAACTCGTTGGAGAAATA
CCCATTTCGCTATCTCGTTTCCCGGAATCTGCATTTTCGAAGAACCGGGTTCTTTGTGGT
TCTCCGTTGCCAAACTGTACGGCGGCGGTTCCTCGTGAACCGTCGTCGTCGGCAGGAGCT
TTAGCTTCTCCGGTTAGTCCTAAAACTACCATTGCATCTTCTCCGAGCTCATTGCCGGTG
ACCTCTGCAACTTTGAGTCCAAAAAATACCCATCATAGTAGTGGTAAAATGAGCTCATTG
GCCATAATCGCCATTATACTAGGTGATGTGTTGGTTCTATGTGTTGTGTGTATTTTTCTC
TACTGTTTCTTCTGCATTAGGAAAGTTTCTTCTCAGAAAAATGGGTCACACATTCTTGAA
GGTGAGAAGATTGTGTACTCGTCTAGCCCGTATCCGAATACGGGCCAGACGAGCGGGTTC
GAGAGAGGGAAAATGGTGTTTTTCGAAGGGGCGAAGAGGTTTGAGCTTGAGGATTTGTTG
AGAGCTTCAGCTGAAATGTTGGGAAAAGGGGGATTTGGGACTGCTTATAAGGCTGTGTTG
GATGATGGAAATGTTGTTGCTGTGAAAAGATTGAAAGAGTTGAATGTTTGTGGGAAAAGA
GAATTTGAGCAACAAATGGAAGTTTTAGGAAGACTTAGACACCCAAATTTGGTTAGTTTG
AAAGCATACTACTTTGCTAGAGATGAGAAGTTGTTGGTGTATGAGTTCATGACTAATGGC
AACTTGTTTTGGCTTCTTCATGGTAACAGAGGGCCTGGAAGAACTCCTTTAGACTGGACA
ACAAGGTTAAAGATTGCAGCCGGAGCAGCTCGAGGTCTAGCCTTCATCCACAACTCATGC
AAGTCCTTGAAACTCACTCATGGCAACATCAAATCAACTAACATCCTCATTGACAAGAGT
GGCAATGCACGTGTCTCCGACTTTGGTCTAGCCATCTTCGCCACACCATCTTCCGTCCCA
AAAACCAATGGCTACCGAGCCCCTGAAGTCGCATTGGATGGTCGTAAAATAACTCAAAAG
TCCGACATCTACTCATTCGGGGTCCTATTACTCGAGCTGCTAACCGGTAAATGCCCCTCA
GTCGTGGACAATGGTAGTGGCCTCACAACCGGCTACGGAGGGGTCGTGGACTTACCGAGA
TGGGTGCAATCCGTGGTGAGGGAAGAATGGACTGCGGAAGTGTTCGATTTGGAGTTGATG
AGGTATAAGGACATTGAGGAGGAAATGGTGGGGCTATTGCAGATAGCTATGGCATGTACT
TCAACATCACCAGATCAAAGGCCTAAAATAAATTATGTTGTGAAAATGATTGAAGAGTTG
AGAGGTGTTGAAGTTTCACCTTCTCATGACACTGCTACTGATTCTGTTTCTGACTCTCCT
GCTGTTTCTGAAGATAATACATGTGGTGCAGCTAGTCAGTAG