Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037774
CDS Infomation

pacid=37443729 polypeptide=PGSC0003DMP400025675 locus=PGSC0003DMG401014575 ID=PGSC0003DMT400037774.v4.03 annot-version=v4.03
Sequence

ATGAGTGGTTCAAAATTGGAGGGGCCATCGGCTCCGGTGGTAAGACGAGACCCGTATGAA
GTGTTGGCTGTTACGAGGGATTCGTCGGATCAGGAGATTAAGACTGCTTATAGAAAGCTT
GCTCTCAAGTATCATCCTGACAAGAATGCTAACAATCCTGAAGCTTCAGAACTCTTCAAG
GAGGTTGCATACTCATATAGCATTCTATCTGATCCGGAGAAAAGGAGGCAATATGATATG
GCTGGCTTCGAGGCTCTTGAAGCTGAAGGAATGGATATGGAAATTGATTTGTCCAACCTT
GGAACTGTCAACACAATGTTTGCAGCATTGTTTAGCAAGTTGGGTGTTCCTATCAAAACA
ACTATTTCTGCTAATGTTCTTGAAGAAGCTTTGAATGGAACTGTCACGGTCCGCCCTCTT
CCAATTGGCACATCAGTCAGTGGAAAGGTAGAAAAGCAAAATGCTCATTTTTTCGGTGTA
ACAATTAGTGACGAACAAGCAGAAGCAGGGATTGTAGTAAGAGTTACTTCAGCTGCCCAA
AGCAAATTCAAGCTACTATATTTTGAACATGATGTGAGTGGGGGTTACGGCCTGGCCTTG
CAGGAAGATAGTGAAAAAGCCGGCAAGGTAACCTCCGCGGGAATGTATTTCTTGCACTTT
CAAGTGTACAGAATGGATTCAACTGTAAATGCGTTAGCAATGGCCAAAGATCCTGAAGCT
GCTTTCTTTAAGAGGCTGGAGGGCCTTCAACCTTGTGAGGTCTCACAACTAAATGCTGGC
ACTCACATATTTGCTGTTTATGGAGATAATTTCTTTAAGCCTGCTAGTTACACTATTGAG
GCTCTGTGTGCCAAGACATACGAGGACACAACTCATAATCTCCAGGATATCGAGGCTCAG
ATATTGAGGAAGAGAAATGAGCTTCGACAGTTTGAGACAGAATATAGAAAGGCATTAGCG
CGGTTCCAGGAAGTGACCAATAGATACAGCCAGGAGAAGCAGTCTGTAAGTTTGTCTGTT
ACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025675
PEP Infomation

pacid=37443729 transcript=PGSC0003DMT400037774 locus=PGSC0003DMG401014575 ID=PGSC0003DMT400037774.v4.03 annot-version=v4.03
Sequence

MSGSKLEGPSAPVVRRDPYEVLAVTRDSSDQEIKTAYRKLALKYHPDKNANNPEASELFK
EVAYSYSILSDPEKRRQYDMAGFEALEAEGMDMEIDLSNLGTVNTMFAALFSKLGVPIKT
TISANVLEEALNGTVTVRPLPIGTSVSGKVEKQNAHFFGVTISDEQAEAGIVVRVTSAAQ
SKFKLLYFEHDVSGGYGLALQEDSEKAGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEA
AFFKRLEGLQPCEVSQLNAGTHIFAVYGDNFFKPASYTIEALCAKTYEDTTHNLQDIEAQ
ILRKRNELRQFETEYRKALARFQEVTNRYSQEKQSVSLSVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400037774
Transcript Infomation

pacid=37443729 locus=PGSC0003DMG401014575 ID=PGSC0003DMT400037774.v4.03 annot-version=v4.03
Sequence

ATGAGTGGTTCAAAATTGGAGGGGCCATCGGCTCCGGTGGTAAGACGAGACCCGTATGAA
GTGTTGGCTGTTACGAGGGATTCGTCGGATCAGGAGATTAAGACTGCTTATAGAAAGCTT
GCTCTCAAGTATCATCCTGACAAGAATGCTAACAATCCTGAAGCTTCAGAACTCTTCAAG
GAGGTTGCATACTCATATAGCATTCTATCTGATCCGGAGAAAAGGAGGCAATATGATATG
GCTGGCTTCGAGGCTCTTGAAGCTGAAGGAATGGATATGGAAATTGATTTGTCCAACCTT
GGAACTGTCAACACAATGTTTGCAGCATTGTTTAGCAAGTTGGGTGTTCCTATCAAAACA
ACTATTTCTGCTAATGTTCTTGAAGAAGCTTTGAATGGAACTGTCACGGTCCGCCCTCTT
CCAATTGGCACATCAGTCAGTGGAAAGGTAGAAAAGCAAAATGCTCATTTTTTCGGTGTA
ACAATTAGTGACGAACAAGCAGAAGCAGGGATTGTAGTAAGAGTTACTTCAGCTGCCCAA
AGCAAATTCAAGCTACTATATTTTGAACATGATGTGAGTGGGGGTTACGGCCTGGCCTTG
CAGGAAGATAGTGAAAAAGCCGGCAAGGTAACCTCCGCGGGAATGTATTTCTTGCACTTT
CAAGTGTACAGAATGGATTCAACTGTAAATGCGTTAGCAATGGCCAAAGATCCTGAAGCT
GCTTTCTTTAAGAGGCTGGAGGGCCTTCAACCTTGTGAGGTCTCACAACTAAATGCTGGC
ACTCACATATTTGCTGTTTATGGAGATAATTTCTTTAAGCCTGCTAGTTACACTATTGAG
GCTCTGTGTGCCAAGACATACGAGGACACAACTCATAATCTCCAGGATATCGAGGCTCAG
ATATTGAGGAAGAGAAATGAGCTTCGACAGTTTGAGACAGAATATAGAAAGGCATTAGCG
CGGTTCCAGGAAGTGACCAATAGATACAGCCAGGAGAAGCAGTCTGTAAGTTTGTCTGTT
ACCTAA