Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037755
CDS Infomation

pacid=37442502 polypeptide=PGSC0003DMP400025662 locus=PGSC0003DMG400014566 ID=PGSC0003DMT400037755.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTGAAAGAAAATTAGCAAGTGCAATGGGTGGAAAAACAACAAGAGCATGTGAC
AATTGTATTAAAAAAAGGGCACGTTGGTATTGTCCGGCCGATGATGCATTTTTATGTCAA
AATTGTGACGCTTCCGTTCATTCGGCGAACCCTTTGGCGCGTAGGCACGAAAGGGTTCGT
CTTAAAACATCGTCACTGAAACAACCATCATCGTCATCATCATCAGACGATTACTTTCCC
GATTTGGAAAGTCCACTATCAATTTCATCAGTGTCAGTCCCATCGTGGCATCGCGGATTT
ACTAGAAAGGTGCGGACTCCTAGGCATGGGAGGAAGGCTAGTAAATCTGCGGGGGATGGA
GATGTCATTCAAAGGAATCCTATTCATCTCGTCCCCGAGATATTAAGCGATGAAAATTCC
CATGATGAGAATGAAGAGGAGCAACTTTTATATCGAGTGCCCATACTCGATCCCTTCGTG
GCCCAGCTCTACAGCTCGGCCACAAGAAATAATCATGAGATGGTGGAGAGTAACGCGACT
GCAGCAGCAGATGCTGATTCAGAATTTAAACTCGAATCTAAAGAGATGATGTTGCAGGAT
GATATCTGTAATGTCGATCTGAATAGATTTCACGAGATGTTACCCTCGGAGATGGAGCTA
GCGGAATTCGCAGCCGATGTTGAGAGTTTACTAGGTAAAGGACTTGATGATGAGTCATTT
GATATGGAAGGATTAGGTCTATTAGGGGTTTGTAACAAGGAGGAAAATTCAATGGAATAT
TCAATGATCAGTCATGAAAAAGTCAAAATTGAAGATGAGGGAGAAATTGAAGTCGTTAGA
AAAACAATTTCTGCTACTACTCATGATCATCAATATAATCATACTCATCATGATATTGAT
ATTAATGAAGACACTTTTGAATTCAAATTCGATTGCGATTCGCCGATGAATATTATCGGA
GAAGATGAAGTAATTATGAAGGATGAAAATAAAAAGAAGATTTTATTAAATCTTGATTAT
GAAGGTGTATTAACAGCATGGGCTGACCAAAGGTCTCCTTGGACTAATGGTGAAAGGCCA
GAATTGGACTCAAATGACTCATGGCCACATTGCATGGGAAATTACATGGGAATAATGAAC
GAAAATGTAACAATAGTGGATAGAGGAAGAGAAGCGAGAGTTACAAGGTACAGAGAAAAA
AGACGAACAAGATTATTTTCGAAGAAAATAAGATACGAAGTTAGGAAATTGAATGCTGAA
AAGAGGCCAAGAATGAAAGGAAGGTTTGTTAAAAGGACCAATTTTGTAACAACAACCACC
CCTAATTACCCTTTGGTTAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400025662
PEP Infomation

pacid=37442502 transcript=PGSC0003DMT400037755 locus=PGSC0003DMG400014566 ID=PGSC0003DMT400037755.v4.03 annot-version=v4.03
Sequence

MVSERKLASAMGGKTTRACDNCIKKRARWYCPADDAFLCQNCDASVHSANPLARRHERVR
LKTSSLKQPSSSSSSDDYFPDLESPLSISSVSVPSWHRGFTRKVRTPRHGRKASKSAGDG
DVIQRNPIHLVPEILSDENSHDENEEEQLLYRVPILDPFVAQLYSSATRNNHEMVESNAT
AAADADSEFKLESKEMMLQDDICNVDLNRFHEMLPSEMELAEFAADVESLLGKGLDDESF
DMEGLGLLGVCNKEENSMEYSMISHEKVKIEDEGEIEVVRKTISATTHDHQYNHTHHDID
INEDTFEFKFDCDSPMNIIGEDEVIMKDENKKKILLNLDYEGVLTAWADQRSPWTNGERP
ELDSNDSWPHCMGNYMGIMNENVTIVDRGREARVTRYREKRRTRLFSKKIRYEVRKLNAE
KRPRMKGRFVKRTNFVTTTTPNYPLVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400037755
Transcript Infomation

pacid=37442502 locus=PGSC0003DMG400014566 ID=PGSC0003DMT400037755.v4.03 annot-version=v4.03
Sequence

ATGGTTTCTGAAAGAAAATTAGCAAGTGCAATGGGTGGAAAAACAACAAGAGCATGTGAC
AATTGTATTAAAAAAAGGGCACGTTGGTATTGTCCGGCCGATGATGCATTTTTATGTCAA
AATTGTGACGCTTCCGTTCATTCGGCGAACCCTTTGGCGCGTAGGCACGAAAGGGTTCGT
CTTAAAACATCGTCACTGAAACAACCATCATCGTCATCATCATCAGACGATTACTTTCCC
GATTTGGAAAGTCCACTATCAATTTCATCAGTGTCAGTCCCATCGTGGCATCGCGGATTT
ACTAGAAAGGTGCGGACTCCTAGGCATGGGAGGAAGGCTAGTAAATCTGCGGGGGATGGA
GATGTCATTCAAAGGAATCCTATTCATCTCGTCCCCGAGATATTAAGCGATGAAAATTCC
CATGATGAGAATGAAGAGGAGCAACTTTTATATCGAGTGCCCATACTCGATCCCTTCGTG
GCCCAGCTCTACAGCTCGGCCACAAGAAATAATCATGAGATGGTGGAGAGTAACGCGACT
GCAGCAGCAGATGCTGATTCAGAATTTAAACTCGAATCTAAAGAGATGATGTTGCAGGAT
GATATCTGTAATGTCGATCTGAATAGATTTCACGAGATGTTACCCTCGGAGATGGAGCTA
GCGGAATTCGCAGCCGATGTTGAGAGTTTACTAGGTAAAGGACTTGATGATGAGTCATTT
GATATGGAAGGATTAGGTCTATTAGGGGTTTGTAACAAGGAGGAAAATTCAATGGAATAT
TCAATGATCAGTCATGAAAAAGTCAAAATTGAAGATGAGGGAGAAATTGAAGTCGTTAGA
AAAACAATTTCTGCTACTACTCATGATCATCAATATAATCATACTCATCATGATATTGAT
ATTAATGAAGACACTTTTGAATTCAAATTCGATTGCGATTCGCCGATGAATATTATCGGA
GAAGATGAAGTAATTATGAAGGATGAAAATAAAAAGAAGATTTTATTAAATCTTGATTAT
GAAGGTGTATTAACAGCATGGGCTGACCAAAGGTCTCCTTGGACTAATGGTGAAAGGCCA
GAATTGGACTCAAATGACTCATGGCCACATTGCATGGGAAATTACATGGGAATAATGAAC
GAAAATGTAACAATAGTGGATAGAGGAAGAGAAGCGAGAGTTACAAGGTACAGAGAAAAA
AGACGAACAAGATTATTTTCGAAGAAAATAAGATACGAAGTTAGGAAATTGAATGCTGAA
AAGAGGCCAAGAATGAAAGGAAGGTTTGTTAAAAGGACCAATTTTGTAACAACAACCACC
CCTAATTACCCTTTGGTTAAATAA