Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037753
CDS Infomation

pacid=37443311 polypeptide=PGSC0003DMP400025660 locus=PGSC0003DMG400014565 ID=PGSC0003DMT400037753.v4.03 annot-version=v4.03
Sequence

ATGGAGAATTCGCAAATCGGCGCCCTAAAACCCTTGCAAAATCTCTACCCTTTACCTCCT
CGCCGCCGGCTACTCATGAGCCAAACCTACAGTACACTACTTCAGATTATATCCGATTGC
CCGAGCACAGACTCCACCACTGATAAACAAAAACTAGATGACAATGAGAGCAGTAAACTG
GGAACAGAAAATGAAGTTGGTGAATCAGTTGATCATCGTCTCATCAGGTCTGAGAATTTG
TTAGGTACTGGTCCTGCTCATAACGAGTCTAACAATCTGGCAGTGCAATCGGGTTCTGGT
GATAGAAGTGATGGGAACTCTCGTTATGGATATGGAGATTTTACTCGTGCACGAATGCAA
GTAGATTTAGATCTGTCAAATCATACAAGTAATGCAGTAGAAGGCGATAGAGGTGATTTT
ATAACAAACGATATCATTGATATGAATTGTTTGGTACACAAAACTCTTGGTTATAACTAT
CAAATGGTCAAGGAACCTGGGAATAGGTGTAGCACTCATGAATCTGAGGTGAAGGAGCCT
GATCCTATCAGACCGGTAGGATTAGACAAAGACTCCAGTATTGATGATGTCAGTGCAGGA
ATAGAATCATGTTTTGGTGCGGATGCAATTGCTGATTTGTCGCAACCTGCAGAGCTCTCT
GGAGAGAAAATGGATGATTCTGAGACACATTTTTCGGAAGAAATGAAGCATGGATTGCGT
GTAAAAGAGGTGGAGTTGGAAACATTGATATCTTCTGCTGGAGCAGCAGAGTCGTCTGTC
CATGTTCCTATGGGTGAAGAGATGGAGGAAGGGGAAGCATTCAGAGATTTTATGGTTTTT
GATGAATCAGATTATGACATTCTTAATCATATTGGGAATGAGAAGAAGGATGGAGCAGAT
GAGTCTCCTGCTGACATTTCCGGTAGAGAAGAGTTTGCTTTTGATGTTCACGTTAATGCA
CCACAGAGGAAGGATGCTTCTGCCTCTTCAACCAATGATGCAGTTGATGAGGATAACACC
TTTGTTGGGGGAGAGTTCATAAGAAAGTTCAGAGAAGAGCCGCAAGATAATACTGAAAAG
GTTTTCCGCTCAAAGGATGTCGAGACCAGAAAGGTTTGTGTGTATGACACCATTTTGGAT
AGTGAAAATAATGCTAAGCAAGTTGGTGGAGACGTGAAGTTAGATCATCCTGCTGGTTCT
CAATTTGACTCAACCTCCGGTGTAAATGCAAAAAAAAGAAAACACTTAAAAGTTGCTACT
GAGAATGAGAATATTGGTAAAAATGAAAAGAAGCGAGGTCCTTTAACCAAGGAAAGCAAA
GCAAGGAAAAAGGCCAAGCGGAGAAGTAAACGAGCTGAAGAGAGAATAAAGCTTGGAGTT
AAAAGGCTGAGGCTTCCACCAGTGGTGAAACCAAAAGTCGTGAAATATTGCCGCCATTAT
CTCAAGGGAAGATGCCTAGAGGGTGAGGCGTGTAAATTTTCTCATGATACCATCCCCTTG
ACAAAGTCAAAGCCATGTTGTCATTTTGCACGTCAGTCTTGCATGAAAGGTGATGACTGC
CCGTTTGATCATCAACTCTCCAAGTATCCGTGCGATAAATATGCTTCCCAAGGGTTTTGC
AACAGAGGTTCTAGTTGTTTATTTTCACATGAGATAACTGTTAAGACAGAGGCAGTTACA
AGTCCTATTGCTTCAAACTCTTTGGTCCAAGTAAACACAAATGGAATGTTGCATAAAGAC
GTTAACTCCACATCTAGTTCAGCTGGGCTTGTTCCCCGTAATAGCACTGAGCGAACTGTA
TTAGAGCATGTGCGAAAGCCAGCTGCATCAACACCCAAAGGTATCACGTTCTTATCTCAT
GGGAAGTCTTTGCAAGGTGATGCCAGAAAGCATGAAGAAGTTGGTTTACCCTCCAAAGCA
AATGGTGTTGACAATATTCAGAAACCGAATGGATTTATGAAAGGCGCATCTACGAGGACA
CCACAAGGAATGAACTTCTTGTCCTTTGGCCGAGCACCTTCAGCTGAGCCTAGTGGTGAC
ACATTGTCAGGCGTGCTTAATATGGATTATGGAGTTGATAAATTGCAACTGGTTGACATG
AAAGCCAAGTTAGGGAGCATCAATCAAATGTCGACTAGAACCCCTCCTGGTTCTGTACCT
CGGGGTGTAAACTTCCTGTCAGTTGACAAAGCAGTAGAAGATAGACCGCATCCTAATGAG
TGTTACAGTGCTTCATCACCCATTCAGAGGAGACAAAGTGCACCAAATACAACTTCCAGC
GAAATGCCATTTAGACAGTTGAGTTCTTTATTTCCAGCTGGGCAGTCCTTAATCCAGTCC
GCACAAAAGTGCAATGCAGAAATTGCCAGCTCCCCAAAGGCACCGTTCCTTGCAAATACA
CCAAGCTCGATTCAAAAGGCTCTTCAGTCAACTTTAGCATTTGCGGCCAAGTTTGACTTG
GGAGTCAAGTGTGGAATGTCCAATGGCTCCCGACATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025660
PEP Infomation

pacid=37443311 transcript=PGSC0003DMT400037753 locus=PGSC0003DMG400014565 ID=PGSC0003DMT400037753.v4.03 annot-version=v4.03
Sequence

MENSQIGALKPLQNLYPLPPRRRLLMSQTYSTLLQIISDCPSTDSTTDKQKLDDNESSKL
GTENEVGESVDHRLIRSENLLGTGPAHNESNNLAVQSGSGDRSDGNSRYGYGDFTRARMQ
VDLDLSNHTSNAVEGDRGDFITNDIIDMNCLVHKTLGYNYQMVKEPGNRCSTHESEVKEP
DPIRPVGLDKDSSIDDVSAGIESCFGADAIADLSQPAELSGEKMDDSETHFSEEMKHGLR
VKEVELETLISSAGAAESSVHVPMGEEMEEGEAFRDFMVFDESDYDILNHIGNEKKDGAD
ESPADISGREEFAFDVHVNAPQRKDASASSTNDAVDEDNTFVGGEFIRKFREEPQDNTEK
VFRSKDVETRKVCVYDTILDSENNAKQVGGDVKLDHPAGSQFDSTSGVNAKKRKHLKVAT
ENENIGKNEKKRGPLTKESKARKKAKRRSKRAEERIKLGVKRLRLPPVVKPKVVKYCRHY
LKGRCLEGEACKFSHDTIPLTKSKPCCHFARQSCMKGDDCPFDHQLSKYPCDKYASQGFC
NRGSSCLFSHEITVKTEAVTSPIASNSLVQVNTNGMLHKDVNSTSSSAGLVPRNSTERTV
LEHVRKPAASTPKGITFLSHGKSLQGDARKHEEVGLPSKANGVDNIQKPNGFMKGASTRT
PQGMNFLSFGRAPSAEPSGDTLSGVLNMDYGVDKLQLVDMKAKLGSINQMSTRTPPGSVP
RGVNFLSVDKAVEDRPHPNECYSASSPIQRRQSAPNTTSSEMPFRQLSSLFPAGQSLIQS
AQKCNAEIASSPKAPFLANTPSSIQKALQSTLAFAAKFDLGVKCGMSNGSRH*

Transcript Sequence

Transcript ID

PGSC0003DMT400037753
Transcript Infomation

pacid=37443311 locus=PGSC0003DMG400014565 ID=PGSC0003DMT400037753.v4.03 annot-version=v4.03
Sequence

ATGGAGAATTCGCAAATCGGCGCCCTAAAACCCTTGCAAAATCTCTACCCTTTACCTCCT
CGCCGCCGGCTACTCATGAGCCAAACCTACAGTACACTACTTCAGATTATATCCGATTGC
CCGAGCACAGACTCCACCACTGATAAACAAAAACTAGATGACAATGAGAGCAGTAAACTG
GGAACAGAAAATGAAGTTGGTGAATCAGTTGATCATCGTCTCATCAGGTCTGAGAATTTG
TTAGGTACTGGTCCTGCTCATAACGAGTCTAACAATCTGGCAGTGCAATCGGGTTCTGGT
GATAGAAGTGATGGGAACTCTCGTTATGGATATGGAGATTTTACTCGTGCACGAATGCAA
GTAGATTTAGATCTGTCAAATCATACAAGTAATGCAGTAGAAGGCGATAGAGGTGATTTT
ATAACAAACGATATCATTGATATGAATTGTTTGGTACACAAAACTCTTGGTTATAACTAT
CAAATGGTCAAGGAACCTGGGAATAGGTGTAGCACTCATGAATCTGAGGTGAAGGAGCCT
GATCCTATCAGACCGGTAGGATTAGACAAAGACTCCAGTATTGATGATGTCAGTGCAGGA
ATAGAATCATGTTTTGGTGCGGATGCAATTGCTGATTTGTCGCAACCTGCAGAGCTCTCT
GGAGAGAAAATGGATGATTCTGAGACACATTTTTCGGAAGAAATGAAGCATGGATTGCGT
GTAAAAGAGGTGGAGTTGGAAACATTGATATCTTCTGCTGGAGCAGCAGAGTCGTCTGTC
CATGTTCCTATGGGTGAAGAGATGGAGGAAGGGGAAGCATTCAGAGATTTTATGGTTTTT
GATGAATCAGATTATGACATTCTTAATCATATTGGGAATGAGAAGAAGGATGGAGCAGAT
GAGTCTCCTGCTGACATTTCCGGTAGAGAAGAGTTTGCTTTTGATGTTCACGTTAATGCA
CCACAGAGGAAGGATGCTTCTGCCTCTTCAACCAATGATGCAGTTGATGAGGATAACACC
TTTGTTGGGGGAGAGTTCATAAGAAAGTTCAGAGAAGAGCCGCAAGATAATACTGAAAAG
GTTTTCCGCTCAAAGGATGTCGAGACCAGAAAGGTTTGTGTGTATGACACCATTTTGGAT
AGTGAAAATAATGCTAAGCAAGTTGGTGGAGACGTGAAGTTAGATCATCCTGCTGGTTCT
CAATTTGACTCAACCTCCGGTGTAAATGCAAAAAAAAGAAAACACTTAAAAGTTGCTACT
GAGAATGAGAATATTGGTAAAAATGAAAAGAAGCGAGGTCCTTTAACCAAGGAAAGCAAA
GCAAGGAAAAAGGCCAAGCGGAGAAGTAAACGAGCTGAAGAGAGAATAAAGCTTGGAGTT
AAAAGGCTGAGGCTTCCACCAGTGGTGAAACCAAAAGTCGTGAAATATTGCCGCCATTAT
CTCAAGGGAAGATGCCTAGAGGGTGAGGCGTGTAAATTTTCTCATGATACCATCCCCTTG
ACAAAGTCAAAGCCATGTTGTCATTTTGCACGTCAGTCTTGCATGAAAGGTGATGACTGC
CCGTTTGATCATCAACTCTCCAAGTATCCGTGCGATAAATATGCTTCCCAAGGGTTTTGC
AACAGAGGTTCTAGTTGTTTATTTTCACATGAGATAACTGTTAAGACAGAGGCAGTTACA
AGTCCTATTGCTTCAAACTCTTTGGTCCAAGTAAACACAAATGGAATGTTGCATAAAGAC
GTTAACTCCACATCTAGTTCAGCTGGGCTTGTTCCCCGTAATAGCACTGAGCGAACTGTA
TTAGAGCATGTGCGAAAGCCAGCTGCATCAACACCCAAAGGTATCACGTTCTTATCTCAT
GGGAAGTCTTTGCAAGGTGATGCCAGAAAGCATGAAGAAGTTGGTTTACCCTCCAAAGCA
AATGGTGTTGACAATATTCAGAAACCGAATGGATTTATGAAAGGCGCATCTACGAGGACA
CCACAAGGAATGAACTTCTTGTCCTTTGGCCGAGCACCTTCAGCTGAGCCTAGTGGTGAC
ACATTGTCAGGCGTGCTTAATATGGATTATGGAGTTGATAAATTGCAACTGGTTGACATG
AAAGCCAAGTTAGGGAGCATCAATCAAATGTCGACTAGAACCCCTCCTGGTTCTGTACCT
CGGGGTGTAAACTTCCTGTCAGTTGACAAAGCAGTAGAAGATAGACCGCATCCTAATGAG
TGTTACAGTGCTTCATCACCCATTCAGAGGAGACAAAGTGCACCAAATACAACTTCCAGC
GAAATGCCATTTAGACAGTTGAGTTCTTTATTTCCAGCTGGGCAGTCCTTAATCCAGTCC
GCACAAAAGTGCAATGCAGAAATTGCCAGCTCCCCAAAGGCACCGTTCCTTGCAAATACA
CCAAGCTCGATTCAAAAGGCTCTTCAGTCAACTTTAGCATTTGCGGCCAAGTTTGACTTG
GGAGTCAAGTGTGGAATGTCCAATGGCTCCCGACATTAG