Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037718
CDS Infomation

pacid=37443611 polypeptide=PGSC0003DMP400025631 locus=PGSC0003DMG400014552 ID=PGSC0003DMT400037718.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGAGAAGGTGGAATTTCAAGTGTATAATTCAATGACGAGACAGAAGGAAGTA
TTCATACCTAAGGAAACTGGCAAGGTCAAAATGTACGTGTGTGGCGTTACCAGTTACGAT
TACAGTCATATCGGCCATGCTCGTGCCTATGTCGCCTTCGACCTTCTCTACAGATATCTG
AAATACTTGGGATATGAGGTTGTGTATGTGCGCAACTTCACCGATGTAGATGACAAGATA
ATTCGTAGGGCTAATGAGCTTGGAGAAGACCCAACAGCTCTGAGTGGTCGATACTGCCAA
GAGTTTCTAAAAGACATGGATGATCTCCAGTGCCTCCAACCGACTCATCAGCCACGTGTT
ACTGAGCACATGGAGCAGATTAAGGAAATGATAGCTAAGATAATGGCTAATGGCTGTGCA
TACACAATCAATGGAGATGTTTATTTCTCTGTTGATAGTTTTCCAGAGTATGGTCGATTG
TCTGGACGAAAATTAGAAGATAATCGAGCTGGAGAACGAGTTGAAGTTGATTCAAGAAAG
AAAAATCCTGCTGATTTTGCCTTGTGGAAGTCTGCAAAGCCTGGTGAACCAAGTTGGGAG
AGCCCCTGGGGTCCTGGAAGACCAGGTTGGCATATAGAATGCAGCGCAATGAGTGCGCAC
TATCTGACACATTCCTTTGATATACATGGTGGTGGAATGGACTTGACTTTTCCTCACCAT
GAAAATGAGATTGCCCAGAGTTGCGCTGCTTGCCGGGAGAGTAATATTAGCTACTGGATG
CATAATGGTTTTGTGAACATAGATGACGAGAAAATGTCGAAATCATTGGGGAATTTCTTC
ACTATACGTGAGGTTACTCGATTGTACCATCCCCTTGCATTGAGGTACTTCTTGTTGGGG
AATCACTACCGATCTCCGGTTAATTACTCAATATCACAGATAGAAATTGCTTCAGAATCT
GTGTTCTACATTTATCAGACCTTACTAGATTCTGAAGAAGCCTTGTCAGCTTTCCAACAA
GGAACTGAAACTGCAAAAAATGCAAAGGGGCGTGTTACCCCTCAGGCCCAAGAATGCATC
AATAAGCTGCGTAATGAGTTGAAGACAAAGCTCTCTGATGACTTGCATACACCTACAATT
TTAAACGCTGCTCTTCAAGAAGCCCTTAAACTCATGAATAGTTGCTTGACCATACTGAAG
AAAAAGCAGCAAAAGCAACAACACTTATCTGCATCTTTGTCCCTGACCGAGCTCTTGAAA
GAAGTGAAGGCAGTATTGGATGTTCTTGGCTTGCTTGCTGGTTCAACTTGTGCTGAGGTT
TTGCAGCAATTTAAAGAGAGGGCATTGAAAAGGGCTGAGTTAACAGAGGAAGATGTTCTG
CATGCAATAGAGGAAAGAGCACTAGCAAGGAAAAACAAGGATTTCGCTAGAAGTGATCAG
ATCAGAACTGATCTAGCTGCCAAGGGTATCTCTTTAATGGATATTACAGGGACGACAGAA
ACAGCATGGAGGCCTTGTGTAAGATCCATACAAGAACAGCCCGCCGCCCCAGCTCAACCA
AAAAAGTCTGCTGCAGCAGTGCAAGAACAGCCTGTTGCACCATCTCAACAAAAGCAGCCC
TCTGCAGCACCCCAACAAGAACAGCCCGCTGCTGCGCCAGCTCAACAAGATCATCCTACG
GTGCCACCTCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025631
PEP Infomation

pacid=37443611 transcript=PGSC0003DMT400037718 locus=PGSC0003DMG400014552 ID=PGSC0003DMT400037718.v4.03 annot-version=v4.03
Sequence

MANEKVEFQVYNSMTRQKEVFIPKETGKVKMYVCGVTSYDYSHIGHARAYVAFDLLYRYL
KYLGYEVVYVRNFTDVDDKIIRRANELGEDPTALSGRYCQEFLKDMDDLQCLQPTHQPRV
TEHMEQIKEMIAKIMANGCAYTINGDVYFSVDSFPEYGRLSGRKLEDNRAGERVEVDSRK
KNPADFALWKSAKPGEPSWESPWGPGRPGWHIECSAMSAHYLTHSFDIHGGGMDLTFPHH
ENEIAQSCAACRESNISYWMHNGFVNIDDEKMSKSLGNFFTIREVTRLYHPLALRYFLLG
NHYRSPVNYSISQIEIASESVFYIYQTLLDSEEALSAFQQGTETAKNAKGRVTPQAQECI
NKLRNELKTKLSDDLHTPTILNAALQEALKLMNSCLTILKKKQQKQQHLSASLSLTELLK
EVKAVLDVLGLLAGSTCAEVLQQFKERALKRAELTEEDVLHAIEERALARKNKDFARSDQ
IRTDLAAKGISLMDITGTTETAWRPCVRSIQEQPAAPAQPKKSAAAVQEQPVAPSQQKQP
SAAPQQEQPAAAPAQQDHPTVPPQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400037718
Transcript Infomation

pacid=37443611 locus=PGSC0003DMG400014552 ID=PGSC0003DMT400037718.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGAGAAGGTGGAATTTCAAGTGTATAATTCAATGACGAGACAGAAGGAAGTA
TTCATACCTAAGGAAACTGGCAAGGTCAAAATGTACGTGTGTGGCGTTACCAGTTACGAT
TACAGTCATATCGGCCATGCTCGTGCCTATGTCGCCTTCGACCTTCTCTACAGATATCTG
AAATACTTGGGATATGAGGTTGTGTATGTGCGCAACTTCACCGATGTAGATGACAAGATA
ATTCGTAGGGCTAATGAGCTTGGAGAAGACCCAACAGCTCTGAGTGGTCGATACTGCCAA
GAGTTTCTAAAAGACATGGATGATCTCCAGTGCCTCCAACCGACTCATCAGCCACGTGTT
ACTGAGCACATGGAGCAGATTAAGGAAATGATAGCTAAGATAATGGCTAATGGCTGTGCA
TACACAATCAATGGAGATGTTTATTTCTCTGTTGATAGTTTTCCAGAGTATGGTCGATTG
TCTGGACGAAAATTAGAAGATAATCGAGCTGGAGAACGAGTTGAAGTTGATTCAAGAAAG
AAAAATCCTGCTGATTTTGCCTTGTGGAAGTCTGCAAAGCCTGGTGAACCAAGTTGGGAG
AGCCCCTGGGGTCCTGGAAGACCAGGTTGGCATATAGAATGCAGCGCAATGAGTGCGCAC
TATCTGACACATTCCTTTGATATACATGGTGGTGGAATGGACTTGACTTTTCCTCACCAT
GAAAATGAGATTGCCCAGAGTTGCGCTGCTTGCCGGGAGAGTAATATTAGCTACTGGATG
CATAATGGTTTTGTGAACATAGATGACGAGAAAATGTCGAAATCATTGGGGAATTTCTTC
ACTATACGTGAGGTTACTCGATTGTACCATCCCCTTGCATTGAGGTACTTCTTGTTGGGG
AATCACTACCGATCTCCGGTTAATTACTCAATATCACAGATAGAAATTGCTTCAGAATCT
GTGTTCTACATTTATCAGACCTTACTAGATTCTGAAGAAGCCTTGTCAGCTTTCCAACAA
GGAACTGAAACTGCAAAAAATGCAAAGGGGCGTGTTACCCCTCAGGCCCAAGAATGCATC
AATAAGCTGCGTAATGAGTTGAAGACAAAGCTCTCTGATGACTTGCATACACCTACAATT
TTAAACGCTGCTCTTCAAGAAGCCCTTAAACTCATGAATAGTTGCTTGACCATACTGAAG
AAAAAGCAGCAAAAGCAACAACACTTATCTGCATCTTTGTCCCTGACCGAGCTCTTGAAA
GAAGTGAAGGCAGTATTGGATGTTCTTGGCTTGCTTGCTGGTTCAACTTGTGCTGAGGTT
TTGCAGCAATTTAAAGAGAGGGCATTGAAAAGGGCTGAGTTAACAGAGGAAGATGTTCTG
CATGCAATAGAGGAAAGAGCACTAGCAAGGAAAAACAAGGATTTCGCTAGAAGTGATCAG
ATCAGAACTGATCTAGCTGCCAAGGGTATCTCTTTAATGGATATTACAGGGACGACAGAA
ACAGCATGGAGGCCTTGTGTAAGATCCATACAAGAACAGCCCGCCGCCCCAGCTCAACCA
AAAAAGTCTGCTGCAGCAGTGCAAGAACAGCCTGTTGCACCATCTCAACAAAAGCAGCCC
TCTGCAGCACCCCAACAAGAACAGCCCGCTGCTGCGCCAGCTCAACAAGATCATCCTACG
GTGCCACCTCAGTAG