Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037714
CDS Infomation

pacid=37443012 polypeptide=PGSC0003DMP400025627 locus=PGSC0003DMG400014549 ID=PGSC0003DMT400037714.v4.03 annot-version=v4.03
Sequence

ATGCCTGAAAATTCTCATTCAATAAAGCTAAGGTATGTCAAATTATGTTACCAATATCTA
GTGAACAACATTTTAACATTTTTGTTAGTACCTATTATGGCTACAATTTTAATTCAATTT
CTTCAATCAAATCCAAATGAACTTCTCAATTTTTACAACTCACTTTCCTTTACTTCAATT
CACTTAGTTTGTTCATTATTCCTCATAAGTTATGTAACAACATGTTACATAATGTCACGT
CCAAGAACCATATACTTAGTAGATTACGCGTGTTTTCTCCCTCCTATTACATGTCGCATC
CCATTTGCATCCTTTATGGAACACGCACACCTGATTTTGTCATCTGAGCCTAAAAGTGTT
CGTTTTCAAATGAAAATCCTTGAACGTTCTGGTCTTAGTGAAGAAACAGCGTTACCCCCC
GCTATGCATTATATTCCACCAACTCCTACTATGGATTTGGCTAGAGAAGAAGCTGAACTA
GTTATATTTTCAGCTATGGATTCACTTTTGGCGAAAACGGGGCTAAAACCTAAAGACATT
GATGTCCTTGTTGTCAATTGTAGCCTCTTTTCACCAACTCCTTCACTTTCGGCTATGGTT
ATAAACAAGTATAGATTGAGGAGTAATATAAAGAGTTTTAATTTATCTGGAATGGGCTGT
AGTGCTGGGGTAATATCCATTGATTTAGCTCGTGATATACTTCAACAATATCCTAATTCA
AATGCTGTGGTTATTAGCACTGAGATTCTCACACCAAATGGCTATTTAGGTAAGGAGAGA
TCGATGTTACTTACGAATTGCCTATTCAGAATGGGAGGAGCAGCCATACTTTTGTCTAAC
AGAAAATCAGATCGGGCTAGGGCTAAGTACCGTTTGGTACACATAGTCAGAACACACAAA
GGTGCGGATGATAAATCTTTTAGGTGTGTACAACAACAAGAAGATCCGGAAGGGAAAGTG
GGCATAAATTTGTGTATAGATCTCATGCAAGTTGCAGGAGAAGCATTGAAATCTAATATT
ACAACAATTGGACCACTTGTTCTACCCGCTTCGGAACAACTTCTCTTCCTTCTTACCCTC
ATATGCCGAAAATTATTTAAGTCTAAGATGAAACCGTATATTCCGGATTTCAAATTAGCA
TTTGAACATTTTTGCATACACGCTGGAGGAAGGGCTGTAATAGATGAGCTACAAAACAAC
CTACAACTATCGGCGGAGCATGTGGAGGCCTCGAGAATGGCGCTTTACCGGTTCGGTAAC
ACATCATCGTCGTCACTATGGTATGAGATGAGTTACATTGAAGCAAAGGGGAGAATGAAG
AAAGGTGACAGAATTTGGCAAATTGCATTTGGGAGTGGATTTAAGTGTAATAGTGCTGTT
TGGAAGTGTAATAGAACAATCAAGCTTCCAGTAGATGATCATAATCCATGGGCTGATTGC
ATTGATAGATATCCTGTTGATATTCCAGAAGTTGTTAGGCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025627
PEP Infomation

pacid=37443012 transcript=PGSC0003DMT400037714 locus=PGSC0003DMG400014549 ID=PGSC0003DMT400037714.v4.03 annot-version=v4.03
Sequence

MPENSHSIKLRYVKLCYQYLVNNILTFLLVPIMATILIQFLQSNPNELLNFYNSLSFTSI
HLVCSLFLISYVTTCYIMSRPRTIYLVDYACFLPPITCRIPFASFMEHAHLILSSEPKSV
RFQMKILERSGLSEETALPPAMHYIPPTPTMDLAREEAELVIFSAMDSLLAKTGLKPKDI
DVLVVNCSLFSPTPSLSAMVINKYRLRSNIKSFNLSGMGCSAGVISIDLARDILQQYPNS
NAVVISTEILTPNGYLGKERSMLLTNCLFRMGGAAILLSNRKSDRARAKYRLVHIVRTHK
GADDKSFRCVQQQEDPEGKVGINLCIDLMQVAGEALKSNITTIGPLVLPASEQLLFLLTL
ICRKLFKSKMKPYIPDFKLAFEHFCIHAGGRAVIDELQNNLQLSAEHVEASRMALYRFGN
TSSSSLWYEMSYIEAKGRMKKGDRIWQIAFGSGFKCNSAVWKCNRTIKLPVDDHNPWADC
IDRYPVDIPEVVRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400037714
Transcript Infomation

pacid=37443012 locus=PGSC0003DMG400014549 ID=PGSC0003DMT400037714.v4.03 annot-version=v4.03
Sequence

ATGCCTGAAAATTCTCATTCAATAAAGCTAAGGTATGTCAAATTATGTTACCAATATCTA
GTGAACAACATTTTAACATTTTTGTTAGTACCTATTATGGCTACAATTTTAATTCAATTT
CTTCAATCAAATCCAAATGAACTTCTCAATTTTTACAACTCACTTTCCTTTACTTCAATT
CACTTAGTTTGTTCATTATTCCTCATAAGTTATGTAACAACATGTTACATAATGTCACGT
CCAAGAACCATATACTTAGTAGATTACGCGTGTTTTCTCCCTCCTATTACATGTCGCATC
CCATTTGCATCCTTTATGGAACACGCACACCTGATTTTGTCATCTGAGCCTAAAAGTGTT
CGTTTTCAAATGAAAATCCTTGAACGTTCTGGTCTTAGTGAAGAAACAGCGTTACCCCCC
GCTATGCATTATATTCCACCAACTCCTACTATGGATTTGGCTAGAGAAGAAGCTGAACTA
GTTATATTTTCAGCTATGGATTCACTTTTGGCGAAAACGGGGCTAAAACCTAAAGACATT
GATGTCCTTGTTGTCAATTGTAGCCTCTTTTCACCAACTCCTTCACTTTCGGCTATGGTT
ATAAACAAGTATAGATTGAGGAGTAATATAAAGAGTTTTAATTTATCTGGAATGGGCTGT
AGTGCTGGGGTAATATCCATTGATTTAGCTCGTGATATACTTCAACAATATCCTAATTCA
AATGCTGTGGTTATTAGCACTGAGATTCTCACACCAAATGGCTATTTAGGTAAGGAGAGA
TCGATGTTACTTACGAATTGCCTATTCAGAATGGGAGGAGCAGCCATACTTTTGTCTAAC
AGAAAATCAGATCGGGCTAGGGCTAAGTACCGTTTGGTACACATAGTCAGAACACACAAA
GGTGCGGATGATAAATCTTTTAGGTGTGTACAACAACAAGAAGATCCGGAAGGGAAAGTG
GGCATAAATTTGTGTATAGATCTCATGCAAGTTGCAGGAGAAGCATTGAAATCTAATATT
ACAACAATTGGACCACTTGTTCTACCCGCTTCGGAACAACTTCTCTTCCTTCTTACCCTC
ATATGCCGAAAATTATTTAAGTCTAAGATGAAACCGTATATTCCGGATTTCAAATTAGCA
TTTGAACATTTTTGCATACACGCTGGAGGAAGGGCTGTAATAGATGAGCTACAAAACAAC
CTACAACTATCGGCGGAGCATGTGGAGGCCTCGAGAATGGCGCTTTACCGGTTCGGTAAC
ACATCATCGTCGTCACTATGGTATGAGATGAGTTACATTGAAGCAAAGGGGAGAATGAAG
AAAGGTGACAGAATTTGGCAAATTGCATTTGGGAGTGGATTTAAGTGTAATAGTGCTGTT
TGGAAGTGTAATAGAACAATCAAGCTTCCAGTAGATGATCATAATCCATGGGCTGATTGC
ATTGATAGATATCCTGTTGATATTCCAGAAGTTGTTAGGCTCTAA