Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037688
CDS Infomation

pacid=37429057 polypeptide=PGSC0003DMP400025605 locus=PGSC0003DMG400014537 ID=PGSC0003DMT400037688.v4.03 annot-version=v4.03
Sequence

ATGAGAAAACGCCGGCAAACAGTTGAGATGGCTCCTCAGTTCTTCAAGATTATCTTATCT
CCTCATGCCTCTAAATTACATATCCCAGATGAATTTGTAATCAAGTATGGAGCCGATCTG
CGTGATGTTGTGTTCCTTGAGGTCCCCACAGGAGCAATCTGGCAAGTTAAATTATTGCAA
AATTCAAATGGCACCAAATGGCTTAACCACGGATGGAACCAATTTAAGGAATACTATTCA
ATTGCTATGGGTTACTTTTTACTCTTTCAATATAATGGAAACTCTCATTTCTCTGTTTTC
ATATTTGATTTAAGTGCTTCTGAGATTGAATATCTTTCTGGACCAAATGAAGATGATAAT
AATAATGCAAAAGTAGCACATCCAGTATCCCGCCCTAATTGTCTAGCAGAAAGGCAGGAG
GTGAAGCTTGAGAAACCAGATGTGGAGGAGGATTTGACCTATGCAACACAAAAACATAAA
AAGAAGGAGAAGAATTTGTACAATGAGCACTGCAATGAAGTACTACATCCTAACACTACC
AAATACAATAAAAGGAAATATTCTCTCAACTTGGAGGCATCACATCGTAGGTATCCTCTA
CGAAGTAAACAGGTCAAACTTGAACAATCTAAAGCAAACGGGAGTCCTTCATATTCTGGA
AAACAAAGACCTGCCACTTCACTATCCTTTCCAGGTATTCAGTCAGAAAGAAAAGAGTCT
ACCAGGGTGAAGCTTGAGAAAGCAAACTCGGAAGAGGATTTCTGTTGTGCTGTGCCAAAA
GCAAAAAGGGGGGAGGGTAACATGGAGAAGCTTGTAAAACAAGATAGGCAACATAATATG
TTTGATGAAGCACATAAATTTAAAGGGCACTGCAATGAAGCACCAATAGTGGATCCCTCA
ACATCGAAGATGACAACCACTAATCAGCATAGTAAAAAGAGAACTGCTACCAGTTTAGAT
GCATCAAATTGTCGATATCCACTACGAAGTAAGCAACTGAAAGATGTAAAGATTGAAAAA
GGAGATGTGGAAGGGCGCTGCAATGAAGCACTGGTAGTGGATCCGTCAACATCTAAGGTT
ACAACCACTAATCAGCATAGTAAAAAGAGAACTGCTGCCAGTTTGGATGCATCAAATTGT
CGGTATCCACTACGAAGTAAGCAACTGAAACAGGTGAAGATTGAAAAAGGAGATGTGAAA
GAGCACTGCAACAAAATACCAGTGGTGGATCCCTCAGCAACTAAGATGACAACCACTACC
CGACATCATGAAAAGAAAACTAGTGCCAGTTTGGATACGTCACATTGTAAGTATCCACTG
CGAAACAAGCAACTGAAAGAGGTGAAGCTTGAAAAAACAAACGCAGAAGAGGATTTGCTT
TATGTAGCACAAAAAGCAATGAGGAAGAAGGCTAATAATGTGAAGCTTGAGAAAGGAGAT
GTGGAAGAGCGCAGCAAAGTAGGGGATCCCTCAGCATCTACTACCACTAATCAACATAAT
GAAAAGAAAACTGCTACCCCTTTGGATGCATCACATTGCAGGTATCCACTACGAAGTAAG
CAACACATAGAGGTGAAGCTTGAACAATGGGAAACAGGAGGGAATATGCATAACAAAACA
CCAAAAAATAAAGTAGTAGCAGATTCTCCATATTGTATAAGACAAAACCTTGGCCTTCCA
GCATCCTCTCCAAGTTATCAGCCAGTCAGGGTGAAGCTTGAAAAACCAGACAATTTGTTT
TGTGCAGCAGAAAAAGTAAAAGGGAGGGAGACCAACAATGTGAAGCTTGACACAGGAGAC
TTGGAAGGGAATTTGATTGCTGCATCTTATAAAGGAAAAGATTCCACAGCCTCTGAGATG
ACAGTACTTGGCAAGAAAAAGATGTTACCCTCGGAGAAGCACAATCGGGATATGTACTTC
AATCCACACTTCACTGTTTCTATGCAGCCTACTTGTGTCTCTAGAAAGTTCCAATTGGAT
ATACCTGTTGAATTTTTCAAGAAATGTCTCAATGAAGAGGAAACCATTGTAAATCTACGA
GTTTCTAATGGGAGAAGTTGGCGTGCAAAGTTGTTAGACATTCAATCAAATTGTCCAAAG
ATGGAATCATCAGGTTGGAGGGACTTTGTGCTCGACAACAATTTAAAAGAGCATGATACT
TGTGTCTTTGAGCTGATTGACGGCATTGAGCCAATGCTAGATGTGACAATTTTCCGAGCC
ACAACTCCCGTTTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025605
PEP Infomation

pacid=37429057 transcript=PGSC0003DMT400037688 locus=PGSC0003DMG400014537 ID=PGSC0003DMT400037688.v4.03 annot-version=v4.03
Sequence

MRKRRQTVEMAPQFFKIILSPHASKLHIPDEFVIKYGADLRDVVFLEVPTGAIWQVKLLQ
NSNGTKWLNHGWNQFKEYYSIAMGYFLLFQYNGNSHFSVFIFDLSASEIEYLSGPNEDDN
NNAKVAHPVSRPNCLAERQEVKLEKPDVEEDLTYATQKHKKKEKNLYNEHCNEVLHPNTT
KYNKRKYSLNLEASHRRYPLRSKQVKLEQSKANGSPSYSGKQRPATSLSFPGIQSERKES
TRVKLEKANSEEDFCCAVPKAKRGEGNMEKLVKQDRQHNMFDEAHKFKGHCNEAPIVDPS
TSKMTTTNQHSKKRTATSLDASNCRYPLRSKQLKDVKIEKGDVEGRCNEALVVDPSTSKV
TTTNQHSKKRTAASLDASNCRYPLRSKQLKQVKIEKGDVKEHCNKIPVVDPSATKMTTTT
RHHEKKTSASLDTSHCKYPLRNKQLKEVKLEKTNAEEDLLYVAQKAMRKKANNVKLEKGD
VEERSKVGDPSASTTTNQHNEKKTATPLDASHCRYPLRSKQHIEVKLEQWETGGNMHNKT
PKNKVVADSPYCIRQNLGLPASSPSYQPVRVKLEKPDNLFCAAEKVKGRETNNVKLDTGD
LEGNLIAASYKGKDSTASEMTVLGKKKMLPSEKHNRDMYFNPHFTVSMQPTCVSRKFQLD
IPVEFFKKCLNEEETIVNLRVSNGRSWRAKLLDIQSNCPKMESSGWRDFVLDNNLKEHDT
CVFELIDGIEPMLDVTIFRATTPVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400037688
Transcript Infomation

pacid=37429057 locus=PGSC0003DMG400014537 ID=PGSC0003DMT400037688.v4.03 annot-version=v4.03
Sequence

ATGAGAAAACGCCGGCAAACAGTTGAGATGGCTCCTCAGTTCTTCAAGATTATCTTATCT
CCTCATGCCTCTAAATTACATATCCCAGATGAATTTGTAATCAAGTATGGAGCCGATCTG
CGTGATGTTGTGTTCCTTGAGGTCCCCACAGGAGCAATCTGGCAAGTTAAATTATTGCAA
AATTCAAATGGCACCAAATGGCTTAACCACGGATGGAACCAATTTAAGGAATACTATTCA
ATTGCTATGGGTTACTTTTTACTCTTTCAATATAATGGAAACTCTCATTTCTCTGTTTTC
ATATTTGATTTAAGTGCTTCTGAGATTGAATATCTTTCTGGACCAAATGAAGATGATAAT
AATAATGCAAAAGTAGCACATCCAGTATCCCGCCCTAATTGTCTAGCAGAAAGGCAGGAG
GTGAAGCTTGAGAAACCAGATGTGGAGGAGGATTTGACCTATGCAACACAAAAACATAAA
AAGAAGGAGAAGAATTTGTACAATGAGCACTGCAATGAAGTACTACATCCTAACACTACC
AAATACAATAAAAGGAAATATTCTCTCAACTTGGAGGCATCACATCGTAGGTATCCTCTA
CGAAGTAAACAGGTCAAACTTGAACAATCTAAAGCAAACGGGAGTCCTTCATATTCTGGA
AAACAAAGACCTGCCACTTCACTATCCTTTCCAGGTATTCAGTCAGAAAGAAAAGAGTCT
ACCAGGGTGAAGCTTGAGAAAGCAAACTCGGAAGAGGATTTCTGTTGTGCTGTGCCAAAA
GCAAAAAGGGGGGAGGGTAACATGGAGAAGCTTGTAAAACAAGATAGGCAACATAATATG
TTTGATGAAGCACATAAATTTAAAGGGCACTGCAATGAAGCACCAATAGTGGATCCCTCA
ACATCGAAGATGACAACCACTAATCAGCATAGTAAAAAGAGAACTGCTACCAGTTTAGAT
GCATCAAATTGTCGATATCCACTACGAAGTAAGCAACTGAAAGATGTAAAGATTGAAAAA
GGAGATGTGGAAGGGCGCTGCAATGAAGCACTGGTAGTGGATCCGTCAACATCTAAGGTT
ACAACCACTAATCAGCATAGTAAAAAGAGAACTGCTGCCAGTTTGGATGCATCAAATTGT
CGGTATCCACTACGAAGTAAGCAACTGAAACAGGTGAAGATTGAAAAAGGAGATGTGAAA
GAGCACTGCAACAAAATACCAGTGGTGGATCCCTCAGCAACTAAGATGACAACCACTACC
CGACATCATGAAAAGAAAACTAGTGCCAGTTTGGATACGTCACATTGTAAGTATCCACTG
CGAAACAAGCAACTGAAAGAGGTGAAGCTTGAAAAAACAAACGCAGAAGAGGATTTGCTT
TATGTAGCACAAAAAGCAATGAGGAAGAAGGCTAATAATGTGAAGCTTGAGAAAGGAGAT
GTGGAAGAGCGCAGCAAAGTAGGGGATCCCTCAGCATCTACTACCACTAATCAACATAAT
GAAAAGAAAACTGCTACCCCTTTGGATGCATCACATTGCAGGTATCCACTACGAAGTAAG
CAACACATAGAGGTGAAGCTTGAACAATGGGAAACAGGAGGGAATATGCATAACAAAACA
CCAAAAAATAAAGTAGTAGCAGATTCTCCATATTGTATAAGACAAAACCTTGGCCTTCCA
GCATCCTCTCCAAGTTATCAGCCAGTCAGGGTGAAGCTTGAAAAACCAGACAATTTGTTT
TGTGCAGCAGAAAAAGTAAAAGGGAGGGAGACCAACAATGTGAAGCTTGACACAGGAGAC
TTGGAAGGGAATTTGATTGCTGCATCTTATAAAGGAAAAGATTCCACAGCCTCTGAGATG
ACAGTACTTGGCAAGAAAAAGATGTTACCCTCGGAGAAGCACAATCGGGATATGTACTTC
AATCCACACTTCACTGTTTCTATGCAGCCTACTTGTGTCTCTAGAAAGTTCCAATTGGAT
ATACCTGTTGAATTTTTCAAGAAATGTCTCAATGAAGAGGAAACCATTGTAAATCTACGA
GTTTCTAATGGGAGAAGTTGGCGTGCAAAGTTGTTAGACATTCAATCAAATTGTCCAAAG
ATGGAATCATCAGGTTGGAGGGACTTTGTGCTCGACAACAATTTAAAAGAGCATGATACT
TGTGTCTTTGAGCTGATTGACGGCATTGAGCCAATGCTAGATGTGACAATTTTCCGAGCC
ACAACTCCCGTTTCCTGA