Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037638
CDS Infomation

pacid=37469845 polypeptide=PGSC0003DMP400025579 locus=PGSC0003DMG402014514 ID=PGSC0003DMT400037638.v4.03 annot-version=v4.03
Sequence

ATGCATTTCTCACTTCACTCCATAACTCCTATGCATCCACACTCACCGTTCCCGTCGCCG
TCGTCGGAAGCCAAAAATGGTATCACTTCAAGAGCCATTCCTAAACCGCCGCCAACAGTC
ATTAATTTTACACATTCACCACTGCCGCCTTCGCCGTCATCACCGAACGCGTCGTTAAAG
CCAATAATTAAACCTATTGATGATAAAATCGCTTTACATCCACCGCCACGGCGGCCGATA
TATACTCATCCGTTACCGAAGCTTCTTCCGAAACTTACGTTACCACCGCCTCCGGTAACG
GCGTTAATGTTTCCTGTGAATGGTTCTTCTGCACCAGTTTCTAGAGATGAAACTTCGTCG
ATTAAAGTTCAATCGCCGTTGTCAAGTGCATCAATCGGATCTGTAATTGGAATTTCTGTA
GGCGTTACCGGAGCTTTCTTCATTGTTGCAATTATACTCTTCGTGTGTTGCAGGAATAAG
CTTAAATGTGGAAAATTACGTGATCGTGAATCTCCACTGCCAAAAGATGACTTGTACCAT
GTTCTGCGTCAAAGTTTTAGACAGCAGAATGTAGCAAATGGTTCTCCTGTTTCCCCAAAG
CAAGTGACACCATTCCGCCCACTTCACTTCTTTGACAACAATGCTCATTCCAATTCCCTT
AATTCAGAAGCTGGCAGTCATTTTTCACCAAAAGACCACATAGTGGATTTAGCTGTTTCG
GGTGGCAATTTCACATATGAAGAGCTGTGGTTAGCAACTAGTGGATTCTCTACATCCAAC
CTTCTAGGTGAAGGTGGATTTGGGTATGTACACAAAGGAGTCCTCCCTACTGGAAGAGAA
ATTGCAGTTAAACAGTTGAAGGTTGGTAGCCATCAAGGGGAGCGTGAATTTCAAGCAGAA
GTAGAGACTATTAGCCGAGTGCATCATAAACATCTTGTGTCTTTGGTTGGATACTGCATG
AATGGAACAAAGAGATTGCTTGTTTACGAATTTGTTTCCAACAGGACCTTAGAGTATCAT
TTACATGGGGAGGCACAATCCACGATGAAATGGGCATCTAGAATGAAAATTGCTATAGGG
TCAGCCAAAGGATTGGCTTATCTGCATGAAGACTGTAACCCCACTATCATTCATCGTGAT
ATCAAGGCAGCTAATATTCTTCTTGATTCTAACTTTGAAGCTAAGGTTGCGGACTTTGGA
CTTGCCAAGTTCTTATCTGATTCAAACCATCATGTCAGTCATATCTCCACTAGAGTGGTG
GGAACTTTTGGGTATCTGGCCCCAGAGTATGCACAGAGTGGAAAGACCTCAGATAAGTCC
GACATCTTTTCTTTTGGAGTCATGCTCCTGGAGTTAATTACAGGGCGTCCACCTATAATC
TCAACTGAATCCTCCGCATGCAGCAGTTTGGTCATATGGGCAAGGCCTTTGCTTAGAAGT
GCATTGGATGATGGAAAATTGGACGCCCTAGTAGATCCATGTTTGGGACAAAATTATAAC
AGTGAAGAGATGGCTAACATGATTGCTTGTGCTGCTGCTTGTGTGCGTCATTCATCACGG
AGAAGACCGCGGATGAGTCAAGTAGTTCGTGCTTTAGAAGGCGATGCCTTTATCCTGGAC
CTTGATGAGGAAAATAGGCCAGGACAGAGTACCATTTGTGACTTTGATTCTGATGGAAGC
AACTATTTTGAGAAGTTCAAGAAAATCCAGCGGAGCACTCTGAAATCAAAAGAAGAATGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400025579
PEP Infomation

pacid=37469845 transcript=PGSC0003DMT400037638 locus=PGSC0003DMG402014514 ID=PGSC0003DMT400037638.v4.03 annot-version=v4.03
Sequence

MHFSLHSITPMHPHSPFPSPSSEAKNGITSRAIPKPPPTVINFTHSPLPPSPSSPNASLK
PIIKPIDDKIALHPPPRRPIYTHPLPKLLPKLTLPPPPVTALMFPVNGSSAPVSRDETSS
IKVQSPLSSASIGSVIGISVGVTGAFFIVAIILFVCCRNKLKCGKLRDRESPLPKDDLYH
VLRQSFRQQNVANGSPVSPKQVTPFRPLHFFDNNAHSNSLNSEAGSHFSPKDHIVDLAVS
GGNFTYEELWLATSGFSTSNLLGEGGFGYVHKGVLPTGREIAVKQLKVGSHQGEREFQAE
VETISRVHHKHLVSLVGYCMNGTKRLLVYEFVSNRTLEYHLHGEAQSTMKWASRMKIAIG
SAKGLAYLHEDCNPTIIHRDIKAANILLDSNFEAKVADFGLAKFLSDSNHHVSHISTRVV
GTFGYLAPEYAQSGKTSDKSDIFSFGVMLLELITGRPPIISTESSACSSLVIWARPLLRS
ALDDGKLDALVDPCLGQNYNSEEMANMIACAAACVRHSSRRRPRMSQVVRALEGDAFILD
LDEENRPGQSTICDFDSDGSNYFEKFKKIQRSTLKSKEEW*

Transcript Sequence

Transcript ID

PGSC0003DMT400037638
Transcript Infomation

pacid=37469845 locus=PGSC0003DMG402014514 ID=PGSC0003DMT400037638.v4.03 annot-version=v4.03
Sequence

ATGCATTTCTCACTTCACTCCATAACTCCTATGCATCCACACTCACCGTTCCCGTCGCCG
TCGTCGGAAGCCAAAAATGGTATCACTTCAAGAGCCATTCCTAAACCGCCGCCAACAGTC
ATTAATTTTACACATTCACCACTGCCGCCTTCGCCGTCATCACCGAACGCGTCGTTAAAG
CCAATAATTAAACCTATTGATGATAAAATCGCTTTACATCCACCGCCACGGCGGCCGATA
TATACTCATCCGTTACCGAAGCTTCTTCCGAAACTTACGTTACCACCGCCTCCGGTAACG
GCGTTAATGTTTCCTGTGAATGGTTCTTCTGCACCAGTTTCTAGAGATGAAACTTCGTCG
ATTAAAGTTCAATCGCCGTTGTCAAGTGCATCAATCGGATCTGTAATTGGAATTTCTGTA
GGCGTTACCGGAGCTTTCTTCATTGTTGCAATTATACTCTTCGTGTGTTGCAGGAATAAG
CTTAAATGTGGAAAATTACGTGATCGTGAATCTCCACTGCCAAAAGATGACTTGTACCAT
GTTCTGCGTCAAAGTTTTAGACAGCAGAATGTAGCAAATGGTTCTCCTGTTTCCCCAAAG
CAAGTGACACCATTCCGCCCACTTCACTTCTTTGACAACAATGCTCATTCCAATTCCCTT
AATTCAGAAGCTGGCAGTCATTTTTCACCAAAAGACCACATAGTGGATTTAGCTGTTTCG
GGTGGCAATTTCACATATGAAGAGCTGTGGTTAGCAACTAGTGGATTCTCTACATCCAAC
CTTCTAGGTGAAGGTGGATTTGGGTATGTACACAAAGGAGTCCTCCCTACTGGAAGAGAA
ATTGCAGTTAAACAGTTGAAGGTTGGTAGCCATCAAGGGGAGCGTGAATTTCAAGCAGAA
GTAGAGACTATTAGCCGAGTGCATCATAAACATCTTGTGTCTTTGGTTGGATACTGCATG
AATGGAACAAAGAGATTGCTTGTTTACGAATTTGTTTCCAACAGGACCTTAGAGTATCAT
TTACATGGGGAGGCACAATCCACGATGAAATGGGCATCTAGAATGAAAATTGCTATAGGG
TCAGCCAAAGGATTGGCTTATCTGCATGAAGACTGTAACCCCACTATCATTCATCGTGAT
ATCAAGGCAGCTAATATTCTTCTTGATTCTAACTTTGAAGCTAAGGTTGCGGACTTTGGA
CTTGCCAAGTTCTTATCTGATTCAAACCATCATGTCAGTCATATCTCCACTAGAGTGGTG
GGAACTTTTGGGTATCTGGCCCCAGAGTATGCACAGAGTGGAAAGACCTCAGATAAGTCC
GACATCTTTTCTTTTGGAGTCATGCTCCTGGAGTTAATTACAGGGCGTCCACCTATAATC
TCAACTGAATCCTCCGCATGCAGCAGTTTGGTCATATGGGCAAGGCCTTTGCTTAGAAGT
GCATTGGATGATGGAAAATTGGACGCCCTAGTAGATCCATGTTTGGGACAAAATTATAAC
AGTGAAGAGATGGCTAACATGATTGCTTGTGCTGCTGCTTGTGTGCGTCATTCATCACGG
AGAAGACCGCGGATGAGTCAAGTAGTTCGTGCTTTAGAAGGCGATGCCTTTATCCTGGAC
CTTGATGAGGAAAATAGGCCAGGACAGAGTACCATTTGTGACTTTGATTCTGATGGAAGC
AACTATTTTGAGAAGTTCAAGAAAATCCAGCGGAGCACTCTGAAATCAAAAGAAGAATGG
TAA