Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037635
CDS Infomation

pacid=37470772 polypeptide=PGSC0003DMP400025576 locus=PGSC0003DMG400014513 ID=PGSC0003DMT400037635.v4.03 annot-version=v4.03
Sequence

ATGGATGATTTTAGAAAAGAAAGGTCCAACTGTGAAAAATCTCGCAGGAAGTCGGGAATG
AAGACCCTTATCAGAAAAGAGTTGTTGCATCCATTCTCAATCAAGGAAAAAGATCTAGAT
GATAAGATGCCACTGCAACCAACACCAGAATCTAGCCTCTGTGCCTTCTGTGTGAATGGT
AATAGCTGTAGAACTGTTCGCGCAAGAACAAAACTGATGAACACTGTTTTAGAAAGAGGG
AGGCCCGAGGAAGCCCGGCTAACTTTTGATAGCTTGATTAAAGGAGGACATAAACCATCT
CTAATTACATACACTACCCTCCTAGCAGCTTTGACAGTCCAGAAGCGTTTTAATTATATC
CATTCCATTATGTCTGAAGTGCAAGAAAGTGGTATGAAGCCTGATCCAGTTTTCTTCAAT
GCTGTTGTTAATGCATTTTCTGAATCTGGGAACATGGAGGAAGCAATGAAAACTTTCTTG
CAAATGAAGGAGAGTGGGATAAAACCTGCAATCAGCACTTTTAACACTTTGATCAAAGGG
TATGGAATTGCTGGAAAACCTGAAGAATCTATAAAGATAATGGAGTTAATGTCGCGGGAA
GTTAATGTGAAACCCAATTTGAGGACATACAATGTACTTGTTAAAGCATGGTGTAGCAAA
AAGAATTTTACTGATGCATGGAATACTGTGGATAAAATGATAGCTTCTGGCTTACAACCA
GATGTTATTACTTACAATACAATAGCAGCAGCTTATTGTCAAAATCATCAAACTGAAAAA
GCTGAAGGAGTGATTTTAGAAATGCAAAGGAACAATGTGCACCCTAATGAAAGGACTTGT
AGCATCATTATAGCTGGATACTGTAAAGAAGGTGAACTAAAGGATGCATTGAGGTTTGTA
TACACGATGAAGGATCTTGGAATGCATCCTAACCTTGTTATTTTCAATTCACTGATCAAA
GGCTTCCTTGACATGTCAGATAGCGACAGTGTTGATGAGGTTCTTACATTAATGGAAGAG
TTTGGTGCCAAACCTGATGTAATTACTTTCAGCACCATCATGAACGCCTGGGGCGCTGCA
GGATATATGGCTAAGTGCAGGGAGGTCTTTGATGACATGGTCAATGCTGGCATTCCACCT
GATGTCCATGCGTATAGCATTTTGGCAAAGGGTTATGTCCGTGCATTGGAACCAGAAAAA
GCAGAAGAGGTCCTGAATGACATGATTAAATCTGGTAATCGTCCAAATGTTGTGATTTTC
ACCACTGTAATTAGCGGATGGTGCACTGCTGGTAGAATGGATTATGCCATGAGGATCTTC
GAGAAGATGTGTGACTCGGGAATATCTCCTAATCTGAAGGCTTTCGAAACTCTGATATGG
GGTTATGCAGAAAATAAAAATCCTCGGAAAGCGGAAGAGGTAATCCAAATCATGGAAGCA
TTCAACGTTCAACCCGAGAAAAGCACCCGTCTGCTTGTTGCAGAAGCCTGGAATGGTGTT
GGATTAGCTGAGGCAGCCAATGGAGTGTCCAACTCAGGTGAAAAGCAAAGGTCAACTAGC
AAACTCGATATGGAAGATGAAACAGAAGTGAAGAACTTAGAAAAGGTCTACCAGAAGGAT
GCTGTCCATCACTGTTATCCCAAATGTTTGCAGATACCCAATGAACTAATTAATGAACCA
AAGGGGGCAGTAACTGCACTTAAAAGAAGTCGTATGGTGCTAAGAGAAACTGAATTTTCG
TGTGATACTTTGTCTGCTGCAACAAGGTCATTGCATATTAGCTGTAGATTTGGAATGCGG
GCTCCTGTTATTTGCCAGAGACAATTCCAAGTGCAGCTTTGTGCATCTGGTCAGGTTGGA
CACTCAAGTACAGCTGTGTTCTTGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025576
PEP Infomation

pacid=37470772 transcript=PGSC0003DMT400037635 locus=PGSC0003DMG400014513 ID=PGSC0003DMT400037635.v4.03 annot-version=v4.03
Sequence

MDDFRKERSNCEKSRRKSGMKTLIRKELLHPFSIKEKDLDDKMPLQPTPESSLCAFCVNG
NSCRTVRARTKLMNTVLERGRPEEARLTFDSLIKGGHKPSLITYTTLLAALTVQKRFNYI
HSIMSEVQESGMKPDPVFFNAVVNAFSESGNMEEAMKTFLQMKESGIKPAISTFNTLIKG
YGIAGKPEESIKIMELMSREVNVKPNLRTYNVLVKAWCSKKNFTDAWNTVDKMIASGLQP
DVITYNTIAAAYCQNHQTEKAEGVILEMQRNNVHPNERTCSIIIAGYCKEGELKDALRFV
YTMKDLGMHPNLVIFNSLIKGFLDMSDSDSVDEVLTLMEEFGAKPDVITFSTIMNAWGAA
GYMAKCREVFDDMVNAGIPPDVHAYSILAKGYVRALEPEKAEEVLNDMIKSGNRPNVVIF
TTVISGWCTAGRMDYAMRIFEKMCDSGISPNLKAFETLIWGYAENKNPRKAEEVIQIMEA
FNVQPEKSTRLLVAEAWNGVGLAEAANGVSNSGEKQRSTSKLDMEDETEVKNLEKVYQKD
AVHHCYPKCLQIPNELINEPKGAVTALKRSRMVLRETEFSCDTLSAATRSLHISCRFGMR
APVICQRQFQVQLCASGQVGHSSTAVFLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400037635
Transcript Infomation

pacid=37470772 locus=PGSC0003DMG400014513 ID=PGSC0003DMT400037635.v4.03 annot-version=v4.03
Sequence

ATGGATGATTTTAGAAAAGAAAGGTCCAACTGTGAAAAATCTCGCAGGAAGTCGGGAATG
AAGACCCTTATCAGAAAAGAGTTGTTGCATCCATTCTCAATCAAGGAAAAAGATCTAGAT
GATAAGATGCCACTGCAACCAACACCAGAATCTAGCCTCTGTGCCTTCTGTGTGAATGGT
AATAGCTGTAGAACTGTTCGCGCAAGAACAAAACTGATGAACACTGTTTTAGAAAGAGGG
AGGCCCGAGGAAGCCCGGCTAACTTTTGATAGCTTGATTAAAGGAGGACATAAACCATCT
CTAATTACATACACTACCCTCCTAGCAGCTTTGACAGTCCAGAAGCGTTTTAATTATATC
CATTCCATTATGTCTGAAGTGCAAGAAAGTGGTATGAAGCCTGATCCAGTTTTCTTCAAT
GCTGTTGTTAATGCATTTTCTGAATCTGGGAACATGGAGGAAGCAATGAAAACTTTCTTG
CAAATGAAGGAGAGTGGGATAAAACCTGCAATCAGCACTTTTAACACTTTGATCAAAGGG
TATGGAATTGCTGGAAAACCTGAAGAATCTATAAAGATAATGGAGTTAATGTCGCGGGAA
GTTAATGTGAAACCCAATTTGAGGACATACAATGTACTTGTTAAAGCATGGTGTAGCAAA
AAGAATTTTACTGATGCATGGAATACTGTGGATAAAATGATAGCTTCTGGCTTACAACCA
GATGTTATTACTTACAATACAATAGCAGCAGCTTATTGTCAAAATCATCAAACTGAAAAA
GCTGAAGGAGTGATTTTAGAAATGCAAAGGAACAATGTGCACCCTAATGAAAGGACTTGT
AGCATCATTATAGCTGGATACTGTAAAGAAGGTGAACTAAAGGATGCATTGAGGTTTGTA
TACACGATGAAGGATCTTGGAATGCATCCTAACCTTGTTATTTTCAATTCACTGATCAAA
GGCTTCCTTGACATGTCAGATAGCGACAGTGTTGATGAGGTTCTTACATTAATGGAAGAG
TTTGGTGCCAAACCTGATGTAATTACTTTCAGCACCATCATGAACGCCTGGGGCGCTGCA
GGATATATGGCTAAGTGCAGGGAGGTCTTTGATGACATGGTCAATGCTGGCATTCCACCT
GATGTCCATGCGTATAGCATTTTGGCAAAGGGTTATGTCCGTGCATTGGAACCAGAAAAA
GCAGAAGAGGTCCTGAATGACATGATTAAATCTGGTAATCGTCCAAATGTTGTGATTTTC
ACCACTGTAATTAGCGGATGGTGCACTGCTGGTAGAATGGATTATGCCATGAGGATCTTC
GAGAAGATGTGTGACTCGGGAATATCTCCTAATCTGAAGGCTTTCGAAACTCTGATATGG
GGTTATGCAGAAAATAAAAATCCTCGGAAAGCGGAAGAGGTAATCCAAATCATGGAAGCA
TTCAACGTTCAACCCGAGAAAAGCACCCGTCTGCTTGTTGCAGAAGCCTGGAATGGTGTT
GGATTAGCTGAGGCAGCCAATGGAGTGTCCAACTCAGGTGAAAAGCAAAGGTCAACTAGC
AAACTCGATATGGAAGATGAAACAGAAGTGAAGAACTTAGAAAAGGTCTACCAGAAGGAT
GCTGTCCATCACTGTTATCCCAAATGTTTGCAGATACCCAATGAACTAATTAATGAACCA
AAGGGGGCAGTAACTGCACTTAAAAGAAGTCGTATGGTGCTAAGAGAAACTGAATTTTCG
TGTGATACTTTGTCTGCTGCAACAAGGTCATTGCATATTAGCTGTAGATTTGGAATGCGG
GCTCCTGTTATTTGCCAGAGACAATTCCAAGTGCAGCTTTGTGCATCTGGTCAGGTTGGA
CACTCAAGTACAGCTGTGTTCTTGAACTGA