Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037619
CDS Infomation

pacid=37469034 polypeptide=PGSC0003DMP400025563 locus=PGSC0003DMG400014507 ID=PGSC0003DMT400037619.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTAGCCCACTCCCACCACCCCCTCCTCCCCCACCAACTTTCTCACCTATAACC
CCACTTCAACGCTCTTTTACTATGCCTGAACTGTCGAAACCCAGAGGTAAGAAAATGAAA
GGTATTGGTATTGATGAGCATGATGAGGAAATTGAGGAGGAGGAGGAAGAGGAAGGTGAA
GGTGATGGTTTGAAACTGAGAGAAAAGCGAAATGGACTGGGGTACGAGATGCCTATGAAG
GAGCCATTGCCACCCCGGCCGCCGGGTCCAGGGGAGTCGTGGGATTATTTCTTTGAGAAT
GTGAACACGGGACATTCATTAGAAGGAGTGGAGGAAGAAGAAGAAGAAGAAGAGGATGAG
GAGGAGTTGAACGAAGAGAATATCGAAATTCAAAACAAAAGATTTGATAATGTGGGTAGA
AATGAGTATAGAGATGATCAGTTCAAGACACCAGAGAAGAAGGGGAAAGTGGAGAGTGAG
GTTGAAGAGACCCCAATGGCGGATGAACCAGAGAGAGTCTTTAAGCATTCAAACACTGCG
CCTTCTGAGGTGAGAGGTGGAGTAGTAGTGGGAGGTGGGAATGTTGTGTATGGTAACAAT
GCTGATTTCTTTAAAGTTTTAGGCGAGATTGATGATCACTTCCTTAAAGCTTCCGAGAAT
GCACAAGAGGTTTCGAAGATGCTTGAGGCTACTCGATTGCATTACCACTCAAACTTCGCT
GATAATCGAGGACATATAGACCATGCAGCTAGGGTAATGCGAGTCATTACGTGGAACAAA
TCATTTAAGGGTGTACCGAATGGTGATGGTAGTAAGGATGATTATGACATCGACGAATAT
GAGACTCATGCCACTGTTTTGGACAAATTACTGGCTTGGGAGAAGAAACTTTATGATGAA
ATGAAGGCTGGTGAGCTTATAAAACATGAATATCAGAGGAAAGTTGCCTTGCTAAACAAG
CTGAAGAAACGGAATGCTACCTTGGAATCACTGGAGAAGACAAAGGCTGCTGTTAGCCAT
TTGCATACGCGATATATAGTTGACATGCAGTCATTGGATTCAACTGTTAGTGAAGTAAAC
GACATTCGTGACAAGCAACTTTACCCTAAGCTGGCTGCTCTTGTTCAAGGGATGGTTAGC
ATGTGGGAATTCATGTTTAGTCATCACAAGAACCAGCTGCAGTTGGCTACTGATCTCAAA
GCCATTGAAATCTCCGGGTTCCCCTTGGAAACAAGCAAACACCATCATGAACGTACTATC
CAGCTTGGTAATGTTATCAAGGAATGGCATGATCATTTTGACAACCTTGTGAAAAATCAA
AAGCTATACATCCAAACACTCCACAGCTGGTTGAAGCTAAATCTCATACCCATTGAAAGC
AGCCTAAAAGAAAAGATCTCGTCGCCTCCTCGAGCACAGAGTCCCCCAATTCAAGCCCTT
CTCCACTCCTGGCAGGAACTTCTTGAGAAGCTGCCTGATGAGCTCGCCAGAAGTGCCATT
GCTTCCTTTGAAGCAGTGATAAGGACCATCATTATTCATCAGGAGGAAGAGATGAAGCTG
AAGGATAAGTGTGAGGAAACTAAAAAAGAGTACATACGCAAAAGGCAAGCATTTGAAGAT
TGGTACCAAAAGTATATGCAACGTAGAACTCCACCCGATATGACAGATACCGATAGAGCT
ACAGAGTCCAACCCAAAAGATCCCGTTGTGGAAAAGCAGTTGCTTGTGGACACATTGAAG
AAGAGGTTGGACGAGGAGACAGAAGCTCACCAGAGGCTCTGTATTCAAGTTAGGGAGAAG
TCATTAGGGAGTCTCAAGATCCGGTTGCCTGAACTATTCCGAGTCATGTCGGAGTATTCT
TATGCATGTCTAGAGGCTTATGGTCGATTAAGATTGATTGTACAGTCGCAGCACTCAAAT
GGGAGTTCACAAGGGTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025563
PEP Infomation

pacid=37469034 transcript=PGSC0003DMT400037619 locus=PGSC0003DMG400014507 ID=PGSC0003DMT400037619.v4.03 annot-version=v4.03
Sequence

MEASPLPPPPPPPPTFSPITPLQRSFTMPELSKPRGKKMKGIGIDEHDEEIEEEEEEEGE
GDGLKLREKRNGLGYEMPMKEPLPPRPPGPGESWDYFFENVNTGHSLEGVEEEEEEEEDE
EELNEENIEIQNKRFDNVGRNEYRDDQFKTPEKKGKVESEVEETPMADEPERVFKHSNTA
PSEVRGGVVVGGGNVVYGNNADFFKVLGEIDDHFLKASENAQEVSKMLEATRLHYHSNFA
DNRGHIDHAARVMRVITWNKSFKGVPNGDGSKDDYDIDEYETHATVLDKLLAWEKKLYDE
MKAGELIKHEYQRKVALLNKLKKRNATLESLEKTKAAVSHLHTRYIVDMQSLDSTVSEVN
DIRDKQLYPKLAALVQGMVSMWEFMFSHHKNQLQLATDLKAIEISGFPLETSKHHHERTI
QLGNVIKEWHDHFDNLVKNQKLYIQTLHSWLKLNLIPIESSLKEKISSPPRAQSPPIQAL
LHSWQELLEKLPDELARSAIASFEAVIRTIIIHQEEEMKLKDKCEETKKEYIRKRQAFED
WYQKYMQRRTPPDMTDTDRATESNPKDPVVEKQLLVDTLKKRLDEETEAHQRLCIQVREK
SLGSLKIRLPELFRVMSEYSYACLEAYGRLRLIVQSQHSNGSSQGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400037619
Transcript Infomation

pacid=37469034 locus=PGSC0003DMG400014507 ID=PGSC0003DMT400037619.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTAGCCCACTCCCACCACCCCCTCCTCCCCCACCAACTTTCTCACCTATAACC
CCACTTCAACGCTCTTTTACTATGCCTGAACTGTCGAAACCCAGAGGTAAGAAAATGAAA
GGTATTGGTATTGATGAGCATGATGAGGAAATTGAGGAGGAGGAGGAAGAGGAAGGTGAA
GGTGATGGTTTGAAACTGAGAGAAAAGCGAAATGGACTGGGGTACGAGATGCCTATGAAG
GAGCCATTGCCACCCCGGCCGCCGGGTCCAGGGGAGTCGTGGGATTATTTCTTTGAGAAT
GTGAACACGGGACATTCATTAGAAGGAGTGGAGGAAGAAGAAGAAGAAGAAGAGGATGAG
GAGGAGTTGAACGAAGAGAATATCGAAATTCAAAACAAAAGATTTGATAATGTGGGTAGA
AATGAGTATAGAGATGATCAGTTCAAGACACCAGAGAAGAAGGGGAAAGTGGAGAGTGAG
GTTGAAGAGACCCCAATGGCGGATGAACCAGAGAGAGTCTTTAAGCATTCAAACACTGCG
CCTTCTGAGGTGAGAGGTGGAGTAGTAGTGGGAGGTGGGAATGTTGTGTATGGTAACAAT
GCTGATTTCTTTAAAGTTTTAGGCGAGATTGATGATCACTTCCTTAAAGCTTCCGAGAAT
GCACAAGAGGTTTCGAAGATGCTTGAGGCTACTCGATTGCATTACCACTCAAACTTCGCT
GATAATCGAGGACATATAGACCATGCAGCTAGGGTAATGCGAGTCATTACGTGGAACAAA
TCATTTAAGGGTGTACCGAATGGTGATGGTAGTAAGGATGATTATGACATCGACGAATAT
GAGACTCATGCCACTGTTTTGGACAAATTACTGGCTTGGGAGAAGAAACTTTATGATGAA
ATGAAGGCTGGTGAGCTTATAAAACATGAATATCAGAGGAAAGTTGCCTTGCTAAACAAG
CTGAAGAAACGGAATGCTACCTTGGAATCACTGGAGAAGACAAAGGCTGCTGTTAGCCAT
TTGCATACGCGATATATAGTTGACATGCAGTCATTGGATTCAACTGTTAGTGAAGTAAAC
GACATTCGTGACAAGCAACTTTACCCTAAGCTGGCTGCTCTTGTTCAAGGGATGGTTAGC
ATGTGGGAATTCATGTTTAGTCATCACAAGAACCAGCTGCAGTTGGCTACTGATCTCAAA
GCCATTGAAATCTCCGGGTTCCCCTTGGAAACAAGCAAACACCATCATGAACGTACTATC
CAGCTTGGTAATGTTATCAAGGAATGGCATGATCATTTTGACAACCTTGTGAAAAATCAA
AAGCTATACATCCAAACACTCCACAGCTGGTTGAAGCTAAATCTCATACCCATTGAAAGC
AGCCTAAAAGAAAAGATCTCGTCGCCTCCTCGAGCACAGAGTCCCCCAATTCAAGCCCTT
CTCCACTCCTGGCAGGAACTTCTTGAGAAGCTGCCTGATGAGCTCGCCAGAAGTGCCATT
GCTTCCTTTGAAGCAGTGATAAGGACCATCATTATTCATCAGGAGGAAGAGATGAAGCTG
AAGGATAAGTGTGAGGAAACTAAAAAAGAGTACATACGCAAAAGGCAAGCATTTGAAGAT
TGGTACCAAAAGTATATGCAACGTAGAACTCCACCCGATATGACAGATACCGATAGAGCT
ACAGAGTCCAACCCAAAAGATCCCGTTGTGGAAAAGCAGTTGCTTGTGGACACATTGAAG
AAGAGGTTGGACGAGGAGACAGAAGCTCACCAGAGGCTCTGTATTCAAGTTAGGGAGAAG
TCATTAGGGAGTCTCAAGATCCGGTTGCCTGAACTATTCCGAGTCATGTCGGAGTATTCT
TATGCATGTCTAGAGGCTTATGGTCGATTAAGATTGATTGTACAGTCGCAGCACTCAAAT
GGGAGTTCACAAGGGTCTTAG