Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037606
CDS Infomation

pacid=37468533 polypeptide=PGSC0003DMP400025555 locus=PGSC0003DMG400014503 ID=PGSC0003DMT400037606.v4.03 annot-version=v4.03
Sequence

ATGCCTGTGAAAGTAGCGAGTGCGTCATTACGGGATAGGACTCAGGAGTTTCAGAGTATA
GCGGAGAGGTTAAAGAAGTCATTTTCGTCTGTTCAGAATGGGCCGATTAGCAGCAGCACC
AGCAGTGGTTCTAGATCGGAGGAACAGAGGACCACTATTGCTATGCAATCGGAGTTCAAT
CGGCGAGCCTCCAAAATTGGTTTTGGAATACATCAAACTTCTCAGAAGCTTGCAAAGCTA
GCAAAACTGGCAAAAAGGACTTCCGTTTTTGATGATCCGACTACAGAAATCCAGGAGCTG
ACTGCAGTCATCAAGCAAGATATTACAGCACTTAACTCTGCTGTAGTAGATCTCCAGCTT
CACTCTAATGCTCGTAATGAAAGTGGTAATAGTGATACCACTAGTCACTCGACTACTGTT
GTAGATGACTTGAAGAACAGGCTGATGACTGCCACAAAGGAGTTCAAAGAAGTACTCACC
ATGCGGACAGAGAATATGAAGGTTCATGAGAACAGAAGACAGATGTTTTCTTCATCGACT
ACCAAAGAAGCTTCGAATCCATTTATGCGCCAGCGTCCACTAGCTTCAAGGAATACTGCT
AGTACATCAGCCAGCCCTCCTCCTTGGGCTAATGATTCACCTTCCTCTTCTCAGTTATTT
CCAAGGAAGCAAGGGGATGGAAACACACAGCCATTGTTGCAGGATCAACAACAGCAGCAG
CAGCAGATAGTTCCATTGCAAGACAGCTACATGCAGAGTAGAGCTGAAGCTTTTCAAAAT
GCCGAGTCTACTATCCATGAGCTGGGCAGCATTTTTAATCAGCTTGCTACCTTGGTTTCT
GAGCAAGGGGAGGTTGCAATCAGGATTGATGAGAACATGGATGACACACTAACAAATGTG
GAAGGGGCACAAGGGGCTCTGCTCAAGTACCTCAATAGCATCTCGTCAAATCGGTGGCTA
ATGATTAAGATATTCTTTGTGTTGATTTTCTTCCTTATGATTTTCCTATTTTTTGTGGCA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400025555
PEP Infomation

pacid=37468533 transcript=PGSC0003DMT400037606 locus=PGSC0003DMG400014503 ID=PGSC0003DMT400037606.v4.03 annot-version=v4.03
Sequence

MPVKVASASLRDRTQEFQSIAERLKKSFSSVQNGPISSSTSSGSRSEEQRTTIAMQSEFN
RRASKIGFGIHQTSQKLAKLAKLAKRTSVFDDPTTEIQELTAVIKQDITALNSAVVDLQL
HSNARNESGNSDTTSHSTTVVDDLKNRLMTATKEFKEVLTMRTENMKVHENRRQMFSSST
TKEASNPFMRQRPLASRNTASTSASPPPWANDSPSSSQLFPRKQGDGNTQPLLQDQQQQQ
QQIVPLQDSYMQSRAEAFQNAESTIHELGSIFNQLATLVSEQGEVAIRIDENMDDTLTNV
EGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMIFLFFVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400037606
Transcript Infomation

pacid=37468533 locus=PGSC0003DMG400014503 ID=PGSC0003DMT400037606.v4.03 annot-version=v4.03
Sequence

ATGCCTGTGAAAGTAGCGAGTGCGTCATTACGGGATAGGACTCAGGAGTTTCAGAGTATA
GCGGAGAGGTTAAAGAAGTCATTTTCGTCTGTTCAGAATGGGCCGATTAGCAGCAGCACC
AGCAGTGGTTCTAGATCGGAGGAACAGAGGACCACTATTGCTATGCAATCGGAGTTCAAT
CGGCGAGCCTCCAAAATTGGTTTTGGAATACATCAAACTTCTCAGAAGCTTGCAAAGCTA
GCAAAACTGGCAAAAAGGACTTCCGTTTTTGATGATCCGACTACAGAAATCCAGGAGCTG
ACTGCAGTCATCAAGCAAGATATTACAGCACTTAACTCTGCTGTAGTAGATCTCCAGCTT
CACTCTAATGCTCGTAATGAAAGTGGTAATAGTGATACCACTAGTCACTCGACTACTGTT
GTAGATGACTTGAAGAACAGGCTGATGACTGCCACAAAGGAGTTCAAAGAAGTACTCACC
ATGCGGACAGAGAATATGAAGGTTCATGAGAACAGAAGACAGATGTTTTCTTCATCGACT
ACCAAAGAAGCTTCGAATCCATTTATGCGCCAGCGTCCACTAGCTTCAAGGAATACTGCT
AGTACATCAGCCAGCCCTCCTCCTTGGGCTAATGATTCACCTTCCTCTTCTCAGTTATTT
CCAAGGAAGCAAGGGGATGGAAACACACAGCCATTGTTGCAGGATCAACAACAGCAGCAG
CAGCAGATAGTTCCATTGCAAGACAGCTACATGCAGAGTAGAGCTGAAGCTTTTCAAAAT
GCCGAGTCTACTATCCATGAGCTGGGCAGCATTTTTAATCAGCTTGCTACCTTGGTTTCT
GAGCAAGGGGAGGTTGCAATCAGGATTGATGAGAACATGGATGACACACTAACAAATGTG
GAAGGGGCACAAGGGGCTCTGCTCAAGTACCTCAATAGCATCTCGTCAAATCGGTGGCTA
ATGATTAAGATATTCTTTGTGTTGATTTTCTTCCTTATGATTTTCCTATTTTTTGTGGCA
TAG