Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037585
CDS Infomation

pacid=37467796 polypeptide=PGSC0003DMP400025543 locus=PGSC0003DMG400014497 ID=PGSC0003DMT400037585.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTCCAGCTCAAACTAATCGATCACCTTCACCTTCTCAACCTTCCGGAAAAGGG
GAAGTTTCGGATTTGAAGATGCAGCTTAGGCAGTTGGCGGGTAGTCGAGCTCCGGGTACT
GATGATGCAAAGAGGGAGTTGTTTAAGAAGGTGATCTCGTGTATGACAATTGGGATCGAC
GTTTCTTCAGTTTTCAGCGAAATGGTTATGTGCTCAGCAACCTCAGACATTGTGCTAAAG
AAGATGTGCTACCTTTATGTTGGTAACTATGCTAAACACAACCCAGATCTCGCGCTTTTG
ACAATTAATTTTCTTCAGAGGGATTGCAAAGATGAAGATCCCATGATTCGTGGTTTGGCT
CTACGGAGCTTGTGTTCTTTGCGGGTGACAAATTTGGTTGAGTACTTGGTTGGCCCCTTG
GGTGCAGGGTTGAAGGATTCAAATAGTTATGTTAGGACAGTTGCAACCATGGGTGTTTTG
AAGTTGTACCATATCTCAGAATCAACTTGCATGGATGCGGATTTTCCTGCCACGCTTAAG
CACTTGATGCTGAATGACCGAGAAGCTCAGGTTGTAGCCAACTGTTTGTGCGCTCTACAG
GAAATCTGGGGTTTGGAAGCAACCAAATCTGAGGAAGCATCAACAGAAAGAGAAACCCTG
CTAAGCAAGCCACTTATTTATTACCTTTTGAATAGGTTCAAGGAATTCAGCGAATGGGCT
CAATGCGCTGTTCTTGATCTGGTGTCTAAGTATGTGCCTTCTGACAGTAGTGAGATTTTT
GACATGATGAATCTTCTTGAAGATAGGCTTCAACATGCTAATGGTGCTGTTGTCTTGGCA
ACAATCAAGTTATTTCTGCAACTGACACTCTCCATGGCTGACATTCATCAACAGGTATAT
GAGCGTATAAAAGCACCTCTACTTACATTAGTTAGCTCAGGAGGTCCAGAGCAATCCTAT
GCTGTGCTAAGCCATCTACATTTGCTGGTGATGCGTGCACCCTATATTTTTTCAGCTGAC
TACAAGCACTTCTACTGCCAATACAATGAGCCATTTTATGTCAAAAAGCTAAAGCTTGAG
ATGCTGACTGCCGTGGCAAATGAGAGCAATACATACGAAATTGTGACGGAACTATGTGAA
TATGCTGCAAATGTTGACATTCCCATGGCGAGAGAATCGATCAGGGCTGTTGGCAAAATA
GCATTACAACAATATGATGTTAATGCAATTGTAGATAGGCTTCTCCAGTTTTTGGAAATG
GAGAAGGACCATGTGACTGCGGAAACTCTGGTACTTGTGAAAGATCTCCTTAGGAAATAT
CCTCAATGGAGCCATGATTGTATAGCAGTTGTAGGGAATATTAGTAGCAAAAATGTCCAG
GAACCCAAAGCCAAGGCAGCTCTTATCTGGATGTTGGGGGAATATGCTCAAGACATGCAA
GATGCTCCTTACGTATTGGAGAGTCTTATTGAGAATTGGGAAGAGGAGCACTCTGCAGAG
GTTCGTTTACATCTTCTTACAGCAGTAGTTAAGTGCTTTTTTAGAAGACCGCCAGAGACT
CAGAAAGCCTTGGGAGCTGCGTTGGCTGCTGGTGTTAATGATTTTCATCAGGATGTCCAT
GACAGGGCATTATTATACTATAGACTTCTGCAGTACAATGTCTCCATAGCAGAGCGTGTG
GTGAATCCTCCAAAGCAAGCTGTTTCTGTCTTTGCTGATACACAAAGTAATGAAATTAAA
GATCGTATCTTCGATGAGTTTAACAGCCTCTCTGTTGTTTATCAAAAGCCTTCTTACATG
TTCACTGACAAGGAACATAGAGGGCCATTTGCCTTCTCCGAGGAAATTGGAAATTTATCT
CTTGGGGAAGAATCGACTGATAATGTAGTCCCAGCACAGAGAATCGAGGCAAATGATAAG
GATTTACTTTTGAGTACTTCCGATAAAGAAGAAAGTAAAGGTTCTATCCACAATAGTTCT
GCATACAGTGCTCCTGGATATGATGGTTCTTTGGCTGCACCATCTCAAACTGATCTTGTT
TCCTTGGATTACAAACCTACTCCAAATGTGCCATCAGCTACTTTTGCAATTGATGATCTA
CTTGGTCTTGGTTTGCCTGCTGCAGCCAGCCCCCCTCCTCCAACTCCTGTTTTGAAGCTC
AACACTAAAGCTGCTCTAGAACCAAACGCTTTCCAGCAGAAATGGCGTCAACTTCCAATA
TCAATATCACAGGAAACTTCCATTAATCCACAAGGAGTGGCTATTATGACATCTCCTCAA
ACACTTATCCATCATATGCAAGGCCATTCAATCCATTGCATAGCTTCTGGTGGTCAAGCC
CCGAACTTCAAGTTCTTCTTCTATGCACAAAAAGCAGAGGAGCCGTCTACCTATCTTGTA
GAGTGTGTAGTTAATTCATCGTCGTGTAAAGTACAGTTAAAGATCAAAGTGGATGATCAG
AGTACATCTCAGGCCTTCTCAGAGTTGTTCCAGTCAGCCTTGTCCAAATTCGGGTTTTCC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400025543
PEP Infomation

pacid=37467796 transcript=PGSC0003DMT400037585 locus=PGSC0003DMG400014497 ID=PGSC0003DMT400037585.v4.03 annot-version=v4.03
Sequence

MAPPAQTNRSPSPSQPSGKGEVSDLKMQLRQLAGSRAPGTDDAKRELFKKVISCMTIGID
VSSVFSEMVMCSATSDIVLKKMCYLYVGNYAKHNPDLALLTINFLQRDCKDEDPMIRGLA
LRSLCSLRVTNLVEYLVGPLGAGLKDSNSYVRTVATMGVLKLYHISESTCMDADFPATLK
HLMLNDREAQVVANCLCALQEIWGLEATKSEEASTERETLLSKPLIYYLLNRFKEFSEWA
QCAVLDLVSKYVPSDSSEIFDMMNLLEDRLQHANGAVVLATIKLFLQLTLSMADIHQQVY
ERIKAPLLTLVSSGGPEQSYAVLSHLHLLVMRAPYIFSADYKHFYCQYNEPFYVKKLKLE
MLTAVANESNTYEIVTELCEYAANVDIPMARESIRAVGKIALQQYDVNAIVDRLLQFLEM
EKDHVTAETLVLVKDLLRKYPQWSHDCIAVVGNISSKNVQEPKAKAALIWMLGEYAQDMQ
DAPYVLESLIENWEEEHSAEVRLHLLTAVVKCFFRRPPETQKALGAALAAGVNDFHQDVH
DRALLYYRLLQYNVSIAERVVNPPKQAVSVFADTQSNEIKDRIFDEFNSLSVVYQKPSYM
FTDKEHRGPFAFSEEIGNLSLGEESTDNVVPAQRIEANDKDLLLSTSDKEESKGSIHNSS
AYSAPGYDGSLAAPSQTDLVSLDYKPTPNVPSATFAIDDLLGLGLPAAASPPPPTPVLKL
NTKAALEPNAFQQKWRQLPISISQETSINPQGVAIMTSPQTLIHHMQGHSIHCIASGGQA
PNFKFFFYAQKAEEPSTYLVECVVNSSSCKVQLKIKVDDQSTSQAFSELFQSALSKFGFS
*

Transcript Sequence

Transcript ID

PGSC0003DMT400037585
Transcript Infomation

pacid=37467796 locus=PGSC0003DMG400014497 ID=PGSC0003DMT400037585.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTCCAGCTCAAACTAATCGATCACCTTCACCTTCTCAACCTTCCGGAAAAGGG
GAAGTTTCGGATTTGAAGATGCAGCTTAGGCAGTTGGCGGGTAGTCGAGCTCCGGGTACT
GATGATGCAAAGAGGGAGTTGTTTAAGAAGGTGATCTCGTGTATGACAATTGGGATCGAC
GTTTCTTCAGTTTTCAGCGAAATGGTTATGTGCTCAGCAACCTCAGACATTGTGCTAAAG
AAGATGTGCTACCTTTATGTTGGTAACTATGCTAAACACAACCCAGATCTCGCGCTTTTG
ACAATTAATTTTCTTCAGAGGGATTGCAAAGATGAAGATCCCATGATTCGTGGTTTGGCT
CTACGGAGCTTGTGTTCTTTGCGGGTGACAAATTTGGTTGAGTACTTGGTTGGCCCCTTG
GGTGCAGGGTTGAAGGATTCAAATAGTTATGTTAGGACAGTTGCAACCATGGGTGTTTTG
AAGTTGTACCATATCTCAGAATCAACTTGCATGGATGCGGATTTTCCTGCCACGCTTAAG
CACTTGATGCTGAATGACCGAGAAGCTCAGGTTGTAGCCAACTGTTTGTGCGCTCTACAG
GAAATCTGGGGTTTGGAAGCAACCAAATCTGAGGAAGCATCAACAGAAAGAGAAACCCTG
CTAAGCAAGCCACTTATTTATTACCTTTTGAATAGGTTCAAGGAATTCAGCGAATGGGCT
CAATGCGCTGTTCTTGATCTGGTGTCTAAGTATGTGCCTTCTGACAGTAGTGAGATTTTT
GACATGATGAATCTTCTTGAAGATAGGCTTCAACATGCTAATGGTGCTGTTGTCTTGGCA
ACAATCAAGTTATTTCTGCAACTGACACTCTCCATGGCTGACATTCATCAACAGGTATAT
GAGCGTATAAAAGCACCTCTACTTACATTAGTTAGCTCAGGAGGTCCAGAGCAATCCTAT
GCTGTGCTAAGCCATCTACATTTGCTGGTGATGCGTGCACCCTATATTTTTTCAGCTGAC
TACAAGCACTTCTACTGCCAATACAATGAGCCATTTTATGTCAAAAAGCTAAAGCTTGAG
ATGCTGACTGCCGTGGCAAATGAGAGCAATACATACGAAATTGTGACGGAACTATGTGAA
TATGCTGCAAATGTTGACATTCCCATGGCGAGAGAATCGATCAGGGCTGTTGGCAAAATA
GCATTACAACAATATGATGTTAATGCAATTGTAGATAGGCTTCTCCAGTTTTTGGAAATG
GAGAAGGACCATGTGACTGCGGAAACTCTGGTACTTGTGAAAGATCTCCTTAGGAAATAT
CCTCAATGGAGCCATGATTGTATAGCAGTTGTAGGGAATATTAGTAGCAAAAATGTCCAG
GAACCCAAAGCCAAGGCAGCTCTTATCTGGATGTTGGGGGAATATGCTCAAGACATGCAA
GATGCTCCTTACGTATTGGAGAGTCTTATTGAGAATTGGGAAGAGGAGCACTCTGCAGAG
GTTCGTTTACATCTTCTTACAGCAGTAGTTAAGTGCTTTTTTAGAAGACCGCCAGAGACT
CAGAAAGCCTTGGGAGCTGCGTTGGCTGCTGGTGTTAATGATTTTCATCAGGATGTCCAT
GACAGGGCATTATTATACTATAGACTTCTGCAGTACAATGTCTCCATAGCAGAGCGTGTG
GTGAATCCTCCAAAGCAAGCTGTTTCTGTCTTTGCTGATACACAAAGTAATGAAATTAAA
GATCGTATCTTCGATGAGTTTAACAGCCTCTCTGTTGTTTATCAAAAGCCTTCTTACATG
TTCACTGACAAGGAACATAGAGGGCCATTTGCCTTCTCCGAGGAAATTGGAAATTTATCT
CTTGGGGAAGAATCGACTGATAATGTAGTCCCAGCACAGAGAATCGAGGCAAATGATAAG
GATTTACTTTTGAGTACTTCCGATAAAGAAGAAAGTAAAGGTTCTATCCACAATAGTTCT
GCATACAGTGCTCCTGGATATGATGGTTCTTTGGCTGCACCATCTCAAACTGATCTTGTT
TCCTTGGATTACAAACCTACTCCAAATGTGCCATCAGCTACTTTTGCAATTGATGATCTA
CTTGGTCTTGGTTTGCCTGCTGCAGCCAGCCCCCCTCCTCCAACTCCTGTTTTGAAGCTC
AACACTAAAGCTGCTCTAGAACCAAACGCTTTCCAGCAGAAATGGCGTCAACTTCCAATA
TCAATATCACAGGAAACTTCCATTAATCCACAAGGAGTGGCTATTATGACATCTCCTCAA
ACACTTATCCATCATATGCAAGGCCATTCAATCCATTGCATAGCTTCTGGTGGTCAAGCC
CCGAACTTCAAGTTCTTCTTCTATGCACAAAAAGCAGAGGAGCCGTCTACCTATCTTGTA
GAGTGTGTAGTTAATTCATCGTCGTGTAAAGTACAGTTAAAGATCAAAGTGGATGATCAG
AGTACATCTCAGGCCTTCTCAGAGTTGTTCCAGTCAGCCTTGTCCAAATTCGGGTTTTCC
TAG