Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037563
CDS Infomation

pacid=37470178 polypeptide=PGSC0003DMP400025534 locus=PGSC0003DMG400014489 ID=PGSC0003DMT400037563.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTGTAGTAATAATCTTGTTATCCACCATTAACATACTTCTCTTTCTCCACTCA
TCAACATCAACATCAGCAATTCCCATTTCCACCAAAAAAACCTACATTGTTCACATGAAA
CATCACCTCAAACCTCCATCATTCTCCACTCATCATCAATGGTACAAAACCCATCTCCAA
TCTCTCACTTCTTCCACCCAAAACTCTCTTCTCTACACTTATACCACCGCTTATCACGGA
TTCGCCGCAAGTTTGGATTCTCATGAAGTTGAATTACTCCGTCAATCTGATTACGTTGTT
AATATCTACGAAGACACTTTTTACACCCCACAAACAACGCGCACACCTGAATTTCTCGGC
CTCGATAAGCTCGATTTTGGGGATGGACGTACTTTACCGGATTTCAACACGGCTGCTCAG
GATGTTATAATTGGGGTACTTGATACTGGAGTCTGGCCGGAATCGGAAAGTTTTAGTGAT
TTGGGTATGTCGAATGTGCCGTCCAGATGGAGAGGGAAGTGTCAATCGGCGCCGGATTTT
GATCCGAAAGTGCATTGTAATAGGAAACTTATAGGTGCTCTGTATTTTTCTGAAGGTTGT
AAGGGCTGCTCCCAGGAGATTCAATCGCCCCGGGACCATGACGGCCATGGCACACATACT
GCGAGCACAGCGGCAGGATCAATTGTGGCAAATGCTAGTCTTTTTGGCTACGCCAAAGGG
ACTGCTAGAGGGATGGCGCCACAAGCCCGCATAGCAAGTTATAAAGTGTGCTGGAATGAA
CTGTGTGCAGGGTCAGATATTCTTGCTGCATTCGACCGTGCTATTATGGATGGTGTTGAT
GTGTTGTCTGTGTCATTGTCTAATAATGAGAAGACTTATTATACTGACCCGATTGCTCTT
GGTGCTTTTGCTGCTATGGAGAAAGGGATTGTTGTGTCGTGTTCAGCTGGGAATGATGGT
CCTGTGGAATCAACAGTTGTGAACACGGCTCCATGGGTCATTACTGTTGGTGCTGCAACT
CTTGATAGAGATTTTCCAGCTACTGTCACACTGGGTAATGGCCAAAAACTTCAAGGCGTG
TCGTTGTATAGTGGAAAGGTAGAAATGGGAAATAAGTTGTTGAGCTTAGTTTACCAACAA
GGGGGAAACTCCTCTTTGTGCTTTCGTGGTTCGCTTGATCCAAACATTGTTGGTGGAAAA
GTAGTGCTATGTGATAGGGGGGGAAATGATAGAGTTGCAAAGGGACTAGTAGTGAAAGAA
GCTAATGGGGTAGGAATGATATTAGCCAATACACCTGAGACGGGGGAGGAGTTACTCGCG
GATAGCCACATATTACCTGCAGTGACTGTTGGAAGGAAGGTAGGGGATGTAATAAGAAAA
TATGTGAAAACAGAAAACAATCCAACGGTTGTTTTCAGCTTTGGCGGAACAGTGGTAAAA
GTGAAACCATCTCCTGTTGTGGTTACATTTAGCTCAAGAGGGCCAAATGCAATTGTTCCC
CAGATATTAAAGCCTGATGTTATTGGCCCTGGAGTGAACATCTTAGCAGCTTGGCCTCGA
AATATTGGACCAACTTCACTTAATATCGATACACGAAGGACCTCATTCAACATTGTTTCT
GGCACTTCCATGTCTTGCCCTCATGTTTCAGGAGTTGCTGCATTGGTAAAAGCTGTACAT
CCAGATTGGAGTCCAAGCGCGATCAAATCAGCAATCATGACAACCGCGTACACTCAAGAT
AACACCAACTCCTCGTTTCATGATTCTGCACTATACGGTACATTTTCTAATCCATTTGTT
CATGGATCAGGCCATGTAAATCCCCAGAAAGCATTTTCCCCTGGACTCGTATACAATATC
AGGATTCATGATCATATCAAGTTCTTGTGCTCCTTGAACTACACCATAGATCAAATACAA
TCCATTGTAAAAAGACTCAATTTCACTTGTGCAAACAAGTTTGCTGATGCTGGGCAAATC
AACTATCCTTCATTCTCTGTCTTGTTTGAGATTAACTCAAAGCGAGTTGTTCGTTACACT
CGAGAAGTGACCAATGTTGGAGCTGCAAGCTCAGTGTATGAAGTAGCCACTGATGCTCCT
CCATCCGTTACGGTAACAGTGAAGCCAACAAAGCTTGTATTCAAGAAAGTAGGAGAGAAG
CTTCATTACACCGTGACATTTGTGTCCAAGAAAGATGTCAAACCAGGAAATGCATTTGGT
TGGATTTCATGGAACAATGCTAAACATGAAGTGAGAAGTCCAGTTGCATATTCCTGGATG
ACACCTCAATTAGATTTGGAAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400025534
PEP Infomation

pacid=37470178 transcript=PGSC0003DMT400037563 locus=PGSC0003DMG400014489 ID=PGSC0003DMT400037563.v4.03 annot-version=v4.03
Sequence

MEAVVIILLSTINILLFLHSSTSTSAIPISTKKTYIVHMKHHLKPPSFSTHHQWYKTHLQ
SLTSSTQNSLLYTYTTAYHGFAASLDSHEVELLRQSDYVVNIYEDTFYTPQTTRTPEFLG
LDKLDFGDGRTLPDFNTAAQDVIIGVLDTGVWPESESFSDLGMSNVPSRWRGKCQSAPDF
DPKVHCNRKLIGALYFSEGCKGCSQEIQSPRDHDGHGTHTASTAAGSIVANASLFGYAKG
TARGMAPQARIASYKVCWNELCAGSDILAAFDRAIMDGVDVLSVSLSNNEKTYYTDPIAL
GAFAAMEKGIVVSCSAGNDGPVESTVVNTAPWVITVGAATLDRDFPATVTLGNGQKLQGV
SLYSGKVEMGNKLLSLVYQQGGNSSLCFRGSLDPNIVGGKVVLCDRGGNDRVAKGLVVKE
ANGVGMILANTPETGEELLADSHILPAVTVGRKVGDVIRKYVKTENNPTVVFSFGGTVVK
VKPSPVVVTFSSRGPNAIVPQILKPDVIGPGVNILAAWPRNIGPTSLNIDTRRTSFNIVS
GTSMSCPHVSGVAALVKAVHPDWSPSAIKSAIMTTAYTQDNTNSSFHDSALYGTFSNPFV
HGSGHVNPQKAFSPGLVYNIRIHDHIKFLCSLNYTIDQIQSIVKRLNFTCANKFADAGQI
NYPSFSVLFEINSKRVVRYTREVTNVGAASSVYEVATDAPPSVTVTVKPTKLVFKKVGEK
LHYTVTFVSKKDVKPGNAFGWISWNNAKHEVRSPVAYSWMTPQLDLET*

Transcript Sequence

Transcript ID

PGSC0003DMT400037563
Transcript Infomation

pacid=37470178 locus=PGSC0003DMG400014489 ID=PGSC0003DMT400037563.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTGTAGTAATAATCTTGTTATCCACCATTAACATACTTCTCTTTCTCCACTCA
TCAACATCAACATCAGCAATTCCCATTTCCACCAAAAAAACCTACATTGTTCACATGAAA
CATCACCTCAAACCTCCATCATTCTCCACTCATCATCAATGGTACAAAACCCATCTCCAA
TCTCTCACTTCTTCCACCCAAAACTCTCTTCTCTACACTTATACCACCGCTTATCACGGA
TTCGCCGCAAGTTTGGATTCTCATGAAGTTGAATTACTCCGTCAATCTGATTACGTTGTT
AATATCTACGAAGACACTTTTTACACCCCACAAACAACGCGCACACCTGAATTTCTCGGC
CTCGATAAGCTCGATTTTGGGGATGGACGTACTTTACCGGATTTCAACACGGCTGCTCAG
GATGTTATAATTGGGGTACTTGATACTGGAGTCTGGCCGGAATCGGAAAGTTTTAGTGAT
TTGGGTATGTCGAATGTGCCGTCCAGATGGAGAGGGAAGTGTCAATCGGCGCCGGATTTT
GATCCGAAAGTGCATTGTAATAGGAAACTTATAGGTGCTCTGTATTTTTCTGAAGGTTGT
AAGGGCTGCTCCCAGGAGATTCAATCGCCCCGGGACCATGACGGCCATGGCACACATACT
GCGAGCACAGCGGCAGGATCAATTGTGGCAAATGCTAGTCTTTTTGGCTACGCCAAAGGG
ACTGCTAGAGGGATGGCGCCACAAGCCCGCATAGCAAGTTATAAAGTGTGCTGGAATGAA
CTGTGTGCAGGGTCAGATATTCTTGCTGCATTCGACCGTGCTATTATGGATGGTGTTGAT
GTGTTGTCTGTGTCATTGTCTAATAATGAGAAGACTTATTATACTGACCCGATTGCTCTT
GGTGCTTTTGCTGCTATGGAGAAAGGGATTGTTGTGTCGTGTTCAGCTGGGAATGATGGT
CCTGTGGAATCAACAGTTGTGAACACGGCTCCATGGGTCATTACTGTTGGTGCTGCAACT
CTTGATAGAGATTTTCCAGCTACTGTCACACTGGGTAATGGCCAAAAACTTCAAGGCGTG
TCGTTGTATAGTGGAAAGGTAGAAATGGGAAATAAGTTGTTGAGCTTAGTTTACCAACAA
GGGGGAAACTCCTCTTTGTGCTTTCGTGGTTCGCTTGATCCAAACATTGTTGGTGGAAAA
GTAGTGCTATGTGATAGGGGGGGAAATGATAGAGTTGCAAAGGGACTAGTAGTGAAAGAA
GCTAATGGGGTAGGAATGATATTAGCCAATACACCTGAGACGGGGGAGGAGTTACTCGCG
GATAGCCACATATTACCTGCAGTGACTGTTGGAAGGAAGGTAGGGGATGTAATAAGAAAA
TATGTGAAAACAGAAAACAATCCAACGGTTGTTTTCAGCTTTGGCGGAACAGTGGTAAAA
GTGAAACCATCTCCTGTTGTGGTTACATTTAGCTCAAGAGGGCCAAATGCAATTGTTCCC
CAGATATTAAAGCCTGATGTTATTGGCCCTGGAGTGAACATCTTAGCAGCTTGGCCTCGA
AATATTGGACCAACTTCACTTAATATCGATACACGAAGGACCTCATTCAACATTGTTTCT
GGCACTTCCATGTCTTGCCCTCATGTTTCAGGAGTTGCTGCATTGGTAAAAGCTGTACAT
CCAGATTGGAGTCCAAGCGCGATCAAATCAGCAATCATGACAACCGCGTACACTCAAGAT
AACACCAACTCCTCGTTTCATGATTCTGCACTATACGGTACATTTTCTAATCCATTTGTT
CATGGATCAGGCCATGTAAATCCCCAGAAAGCATTTTCCCCTGGACTCGTATACAATATC
AGGATTCATGATCATATCAAGTTCTTGTGCTCCTTGAACTACACCATAGATCAAATACAA
TCCATTGTAAAAAGACTCAATTTCACTTGTGCAAACAAGTTTGCTGATGCTGGGCAAATC
AACTATCCTTCATTCTCTGTCTTGTTTGAGATTAACTCAAAGCGAGTTGTTCGTTACACT
CGAGAAGTGACCAATGTTGGAGCTGCAAGCTCAGTGTATGAAGTAGCCACTGATGCTCCT
CCATCCGTTACGGTAACAGTGAAGCCAACAAAGCTTGTATTCAAGAAAGTAGGAGAGAAG
CTTCATTACACCGTGACATTTGTGTCCAAGAAAGATGTCAAACCAGGAAATGCATTTGGT
TGGATTTCATGGAACAATGCTAAACATGAAGTGAGAAGTCCAGTTGCATATTCCTGGATG
ACACCTCAATTAGATTTGGAAACATGA