Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037490
CDS Infomation

pacid=37448867 polypeptide=PGSC0003DMP400025489 locus=PGSC0003DMG400014466 ID=PGSC0003DMT400037490.v4.03 annot-version=v4.03
Sequence

ATGGATCCAAATCAAGTAGGAGACATAATTTTTAAATCAAAAGTCCCTGATATTAACATC
CCTAATCATCTTCCTTTACATACTTATTGCTTCCAAAACATTTCACAATTCAATAATCGT
CCATGTTTGATCAATGGATCCAATGATCAAATTTACACATATGCTGATGTTGAGCTCACT
TCAAGAAAAGTTGCAATTGGTCTTAACAAGTTAGGGATCCAACAAAAGGATACCATAATG
ATCCTCTTGCCTAATTCACCTGAATTTGTATTCACCTTCTTAGGTGCATCATATATTGGA
GCTATTGCCACAATGGCAAACCCTTTGTTTACACAAGTAGAGGTGGTGAAACAAGCCAAA
GCCTCAAATGCCAAGCTCATTATCACACAAGAATGCAATTTCAACAAAGTGAAGGACTAT
GCATTTGAGAATGATGTGAAGGTCATTTGCATTGATGACGACTCATCGTCTGAGGGCTAC
TTACATTTCTCAGACCTGATTTCAAATTCTGGATTTACCTCTGAACACGACCACTTGCCT
GAGGTGGAAATCCATCCGGATGACGTGGTGGCACTACCATACTCGTCCGGGACCACGGGG
CTACCAAAAGGGGTCATGTTGACACATAAGGGACTAGTCACTAGTGTAGCACAACAAGTT
GATGGTGAAAATCCAACTTTGTTTTTTCATAGTCAAGATGTGATACTTTGTATCTCACCT
TTATTTCACATTTATGCATTGGATTCTGTTCTACTTTGTGGATTAAGAGTTGGAGCAGCA
ATCTTGCTTATGAAGAAATTTGATATTGTTACATGCTTGGAATTGGTACAAAAATACAAA
GTTACAATTGGACCTTTTGTACCACCTATAATTTTGGCCATTGCTAAGAGTCCAATAGTT
GATAATTATGACCTTTCATCAGTAAGGATAGTCATTTGTGGGGCAGCACCATTAGGAAAG
AAGCTTGAAGAGGTAGTTGGAATTAAATTTCCTAATGCTAAACTTGGTCAGGGTTATGGA
ATGACAGAGGCCGGTGCACCAATAACAATGTGCTTAGCATTCGCAAAAGAACCTTTTGAG
ATAAAATCAGGGGCATGTGGTACAGTAATAAGGAATGCGGAGATGAAAATTGTGGATCCA
GACACTGGTATTTCTCTTCCTCGAAATAAATCTGGAGAAATTTGCATTAGGGGTGACCAA
ATTATGAAAGGTTATTTGAATGATCCTGAGGCAACTGCAAGAACAATAGATAAAGAAGGA
TGGTTACATAGTGGTGATATAGGTTATATTGACGATGATGATGAGCTTTTTATTGTGGAT
CGATTAAAGGAATTGATAAAATATAAAGGATTTCAAGTAGCACCTGCTGAGCTTGAAGCA
CTTCTTCTTAATCTTTCTAGTATTTCAGATGCTGCTGTTGTACCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025489
PEP Infomation

pacid=37448867 transcript=PGSC0003DMT400037490 locus=PGSC0003DMG400014466 ID=PGSC0003DMT400037490.v4.03 annot-version=v4.03
Sequence

MDPNQVGDIIFKSKVPDINIPNHLPLHTYCFQNISQFNNRPCLINGSNDQIYTYADVELT
SRKVAIGLNKLGIQQKDTIMILLPNSPEFVFTFLGASYIGAIATMANPLFTQVEVVKQAK
ASNAKLIITQECNFNKVKDYAFENDVKVICIDDDSSSEGYLHFSDLISNSGFTSEHDHLP
EVEIHPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPTLFFHSQDVILCISP
LFHIYALDSVLLCGLRVGAAILLMKKFDIVTCLELVQKYKVTIGPFVPPIILAIAKSPIV
DNYDLSSVRIVICGAAPLGKKLEEVVGIKFPNAKLGQGYGMTEAGAPITMCLAFAKEPFE
IKSGACGTVIRNAEMKIVDPDTGISLPRNKSGEICIRGDQIMKGYLNDPEATARTIDKEG
WLHSGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLNLSSISDAAVVP*

Transcript Sequence

Transcript ID

PGSC0003DMT400037490
Transcript Infomation

pacid=37448867 locus=PGSC0003DMG400014466 ID=PGSC0003DMT400037490.v4.03 annot-version=v4.03
Sequence

ATGGATCCAAATCAAGTAGGAGACATAATTTTTAAATCAAAAGTCCCTGATATTAACATC
CCTAATCATCTTCCTTTACATACTTATTGCTTCCAAAACATTTCACAATTCAATAATCGT
CCATGTTTGATCAATGGATCCAATGATCAAATTTACACATATGCTGATGTTGAGCTCACT
TCAAGAAAAGTTGCAATTGGTCTTAACAAGTTAGGGATCCAACAAAAGGATACCATAATG
ATCCTCTTGCCTAATTCACCTGAATTTGTATTCACCTTCTTAGGTGCATCATATATTGGA
GCTATTGCCACAATGGCAAACCCTTTGTTTACACAAGTAGAGGTGGTGAAACAAGCCAAA
GCCTCAAATGCCAAGCTCATTATCACACAAGAATGCAATTTCAACAAAGTGAAGGACTAT
GCATTTGAGAATGATGTGAAGGTCATTTGCATTGATGACGACTCATCGTCTGAGGGCTAC
TTACATTTCTCAGACCTGATTTCAAATTCTGGATTTACCTCTGAACACGACCACTTGCCT
GAGGTGGAAATCCATCCGGATGACGTGGTGGCACTACCATACTCGTCCGGGACCACGGGG
CTACCAAAAGGGGTCATGTTGACACATAAGGGACTAGTCACTAGTGTAGCACAACAAGTT
GATGGTGAAAATCCAACTTTGTTTTTTCATAGTCAAGATGTGATACTTTGTATCTCACCT
TTATTTCACATTTATGCATTGGATTCTGTTCTACTTTGTGGATTAAGAGTTGGAGCAGCA
ATCTTGCTTATGAAGAAATTTGATATTGTTACATGCTTGGAATTGGTACAAAAATACAAA
GTTACAATTGGACCTTTTGTACCACCTATAATTTTGGCCATTGCTAAGAGTCCAATAGTT
GATAATTATGACCTTTCATCAGTAAGGATAGTCATTTGTGGGGCAGCACCATTAGGAAAG
AAGCTTGAAGAGGTAGTTGGAATTAAATTTCCTAATGCTAAACTTGGTCAGGGTTATGGA
ATGACAGAGGCCGGTGCACCAATAACAATGTGCTTAGCATTCGCAAAAGAACCTTTTGAG
ATAAAATCAGGGGCATGTGGTACAGTAATAAGGAATGCGGAGATGAAAATTGTGGATCCA
GACACTGGTATTTCTCTTCCTCGAAATAAATCTGGAGAAATTTGCATTAGGGGTGACCAA
ATTATGAAAGGTTATTTGAATGATCCTGAGGCAACTGCAAGAACAATAGATAAAGAAGGA
TGGTTACATAGTGGTGATATAGGTTATATTGACGATGATGATGAGCTTTTTATTGTGGAT
CGATTAAAGGAATTGATAAAATATAAAGGATTTCAAGTAGCACCTGCTGAGCTTGAAGCA
CTTCTTCTTAATCTTTCTAGTATTTCAGATGCTGCTGTTGTACCGTAA