Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037473
CDS Infomation

pacid=37447854 polypeptide=PGSC0003DMP400025476 locus=PGSC0003DMG400014459 ID=PGSC0003DMT400037473.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTGTTATTGGTGCTGCTGGTGCTGGTGCTAAATCAGGAGAAGAACGCGATATT
CAGAAGAATTATTGGATGGAGCATACATCGGAACTTACTGTGGAAGCGATGATGCTTGAT
TCAAAAGCAGCTGATCTTGACAAAGAAGAGAGGCCTGAGGTGCTCTCTCTACTCCCACCA
TATGAAGGGAAATCAGTGTTAGAGTTGGGTGCTGGTATTGGCCGTTTCACTAGTGAGTTA
GCCAAAAATGCTGGGCAGCTCATAGCACTGGACTTTATCGATAGTGCAATTAAGAAGAAT
AAAAGCATCAATAAGCATCATAAGAATGTCAAGTTTATGTGTGCTGATGTGACTTCTCCA
GATTTGAAGTTTTCACCTGAATCAGTCGACTTGATATTTTCAAACTGGCTACTGATGTAT
CTTTCTGATGAAGAGGTCCAGAGTCTTGTGGAGAGAATGGTAAAATGGTTGAAAGTTGGA
GGCTACATATTTTTCAGAGAGTCATGCTTCCATCAATCAGGAGACCACAAGCGAAAGAAC
AACCCAACCCATTATCGGGAGCCTAGATTTTACACAAAGGTGTTTAAAGAATGTCATATA
AATGCTGGTGATGGTAAATCATTTGAACTTTCTCTCATCGGTTGCAAGTGCATTGGAGCT
TATGTTAAAAACAAAAAGAATCAGAATCAGATTTGTTGGCTATGGCAAAAGGTTAATTCT
GAGGATGACAGGGGATTCCAGCGTTTCCTGGACAATGTTCAATACAAATGTAGTGGCATA
CTGCGATATGAACGTGTCTTTGGAGAAGGTTATGTGAGCACAGGAGGACTTGATACCACA
AAAGAATTCGTTTCTATGTTGGATCTTCAACCTGGCCAAAAAGTCCTTGATGTTGGCTGT
GGAATAGGTGGAGGTGACTTTTACATGGCTGAGAATTATGATGTTCATGTTGTTGCTATT
GACCTCTCGATTAACATGATATCGTTTGCTCTTGAACGTTCAATTGGTCTCAAATGTGCC
GTTGAATTTGAGGTTGCTGATTGTACAAAGAAAACATATCCTGATGGCACATTTGATGTG
ATTTACAGTCGAGACACTATCCTTCACATCCAAGACAAACCCGCGTTATTCAGATCTTTC
TACAGGTGGCTGAAACCAGGAGGCAAAGTCCTCATAAGTGATTACTGCAAATGCCCAATA
CCAGCATCGGACGAGTTTTCTGAGTATATAAAGCAAAGGGGTTATGATTTACATGATGTT
GCAACATATGGCCAGATGCTCAAAGATGCCAGTTTTGATGAAGTTATTGCTGAGGATCGA
ACTGAACAGTTCATTAATGTTCTCCAAAAGGAGTTGAATACTGTGGAGAAGGAACGCGAT
TCATTTATCCAAGAATTCTCAGAACAAGACTACAATGAAATAGTTGGAGGTTGGAAGGCC
AAGCTATTGAGGAGTTCATCTGGTGAACAGAGGTGGGGTTTGTTCATTGCCAAGAAGAAG
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400025476
PEP Infomation

pacid=37447854 transcript=PGSC0003DMT400037473 locus=PGSC0003DMG400014459 ID=PGSC0003DMT400037473.v4.03 annot-version=v4.03
Sequence

MAPVIGAAGAGAKSGEERDIQKNYWMEHTSELTVEAMMLDSKAADLDKEERPEVLSLLPP
YEGKSVLELGAGIGRFTSELAKNAGQLIALDFIDSAIKKNKSINKHHKNVKFMCADVTSP
DLKFSPESVDLIFSNWLLMYLSDEEVQSLVERMVKWLKVGGYIFFRESCFHQSGDHKRKN
NPTHYREPRFYTKVFKECHINAGDGKSFELSLIGCKCIGAYVKNKKNQNQICWLWQKVNS
EDDRGFQRFLDNVQYKCSGILRYERVFGEGYVSTGGLDTTKEFVSMLDLQPGQKVLDVGC
GIGGGDFYMAENYDVHVVAIDLSINMISFALERSIGLKCAVEFEVADCTKKTYPDGTFDV
IYSRDTILHIQDKPALFRSFYRWLKPGGKVLISDYCKCPIPASDEFSEYIKQRGYDLHDV
ATYGQMLKDASFDEVIAEDRTEQFINVLQKELNTVEKERDSFIQEFSEQDYNEIVGGWKA
KLLRSSSGEQRWGLFIAKKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400037473
Transcript Infomation

pacid=37447854 locus=PGSC0003DMG400014459 ID=PGSC0003DMT400037473.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTGTTATTGGTGCTGCTGGTGCTGGTGCTAAATCAGGAGAAGAACGCGATATT
CAGAAGAATTATTGGATGGAGCATACATCGGAACTTACTGTGGAAGCGATGATGCTTGAT
TCAAAAGCAGCTGATCTTGACAAAGAAGAGAGGCCTGAGGTGCTCTCTCTACTCCCACCA
TATGAAGGGAAATCAGTGTTAGAGTTGGGTGCTGGTATTGGCCGTTTCACTAGTGAGTTA
GCCAAAAATGCTGGGCAGCTCATAGCACTGGACTTTATCGATAGTGCAATTAAGAAGAAT
AAAAGCATCAATAAGCATCATAAGAATGTCAAGTTTATGTGTGCTGATGTGACTTCTCCA
GATTTGAAGTTTTCACCTGAATCAGTCGACTTGATATTTTCAAACTGGCTACTGATGTAT
CTTTCTGATGAAGAGGTCCAGAGTCTTGTGGAGAGAATGGTAAAATGGTTGAAAGTTGGA
GGCTACATATTTTTCAGAGAGTCATGCTTCCATCAATCAGGAGACCACAAGCGAAAGAAC
AACCCAACCCATTATCGGGAGCCTAGATTTTACACAAAGGTGTTTAAAGAATGTCATATA
AATGCTGGTGATGGTAAATCATTTGAACTTTCTCTCATCGGTTGCAAGTGCATTGGAGCT
TATGTTAAAAACAAAAAGAATCAGAATCAGATTTGTTGGCTATGGCAAAAGGTTAATTCT
GAGGATGACAGGGGATTCCAGCGTTTCCTGGACAATGTTCAATACAAATGTAGTGGCATA
CTGCGATATGAACGTGTCTTTGGAGAAGGTTATGTGAGCACAGGAGGACTTGATACCACA
AAAGAATTCGTTTCTATGTTGGATCTTCAACCTGGCCAAAAAGTCCTTGATGTTGGCTGT
GGAATAGGTGGAGGTGACTTTTACATGGCTGAGAATTATGATGTTCATGTTGTTGCTATT
GACCTCTCGATTAACATGATATCGTTTGCTCTTGAACGTTCAATTGGTCTCAAATGTGCC
GTTGAATTTGAGGTTGCTGATTGTACAAAGAAAACATATCCTGATGGCACATTTGATGTG
ATTTACAGTCGAGACACTATCCTTCACATCCAAGACAAACCCGCGTTATTCAGATCTTTC
TACAGGTGGCTGAAACCAGGAGGCAAAGTCCTCATAAGTGATTACTGCAAATGCCCAATA
CCAGCATCGGACGAGTTTTCTGAGTATATAAAGCAAAGGGGTTATGATTTACATGATGTT
GCAACATATGGCCAGATGCTCAAAGATGCCAGTTTTGATGAAGTTATTGCTGAGGATCGA
ACTGAACAGTTCATTAATGTTCTCCAAAAGGAGTTGAATACTGTGGAGAAGGAACGCGAT
TCATTTATCCAAGAATTCTCAGAACAAGACTACAATGAAATAGTTGGAGGTTGGAAGGCC
AAGCTATTGAGGAGTTCATCTGGTGAACAGAGGTGGGGTTTGTTCATTGCCAAGAAGAAG
TGA