Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037454
CDS Infomation

pacid=37448809 polypeptide=PGSC0003DMP400025462 locus=PGSC0003DMG400014452 ID=PGSC0003DMT400037454.v4.03 annot-version=v4.03
Sequence

ATGGCTACTTCTGAGAGTTGCCGGAATGCTACCGGCGCCGGAAAAGTTGATGCTGAGAAA
GCGTTGTACACGGAGCTATGGCGAGCATGTGCAGGTCCGCTTGTGACAGTGCCATGTGAA
GACGAGCTGGTGTTCTATTTCCCACAAGGTCATATTGAACAGGTTGAAGCATCAACAAAT
CAAGCATCAGACCAGCAGATGCCAGTATATAATCTTCGTTCTAAGATCCTCTGTCGTGTG
ATTAACGTCCTGCTGAAGGCTGAACCAGATACTGATGAGGTGTATGCACAAGTGACTTTG
TTGCCAGAACCAAATCAAGATGAGAATGTGGTATCAAAGGAACCGATGCCCTCTCCACCA
CCACGATTCCATGTGCACTCTTTTTGTAAGACATTAACAGCCTCTGATACCAGCACTCAT
GGAGGATTTTCTGTCTTGAGACGGCATGCTGATGAATGCCTCCCACCTCTGGATATGTCT
CGGCAGCCTCCAACACAGGAGTTGGTGGCCAAAGATTTGCATGCAAATGAGTGGCGCTTC
AGGCACATATTCCGGGGCCAGCCTAGGAGGCACCTTCTTCAGAGTGGTTGGAGTGTCTTT
GTTAGTTCGAAAAGGCTTGTTGCAGGGGATGCATTCATATTTCTTAGAGGTGAGAATGGG
GAGCTTCGTGTTGGAGTCCGACGTGCCATGAGACAGCAGGGTAATGCTCCATCATCAGTG
ATATCCAGTCATAGCATGCATCTTGGTGTCCTTGCTACAGCTTGGCATGCCATTCAGACG
AAAACACTGTTCACAGTATATTACAAACCAAGGACGAGCCCTGCTGAGTTTATAGTTCCA
TATGATCAGTATATGGAGTCTCTGAAAAACAATTACTCCATCGGGATGAGGTTTAAAATG
AGGTTTGAAGGTGAAGAAGCTCCAGAACAGAGGTTTACTGGAACTATAGTTGGCATTGAA
AATGCTGACCTCAAAAGGTGGCCCGAGTCGAAATGGAGATGCCTGAAGGTTCGATGGGAT
GAAACTTCTGCTATTCCTAGGCCAGACCGAGTTTCACCCTGGAAAGTAGAGCCAGCTCTT
AGCCCTCCTGCACTTGATCCACTTCCAATACCAAGGCAGAAAAGGCCTCGATCAAATGTT
CTGCCCTCGTCTCCTGATTCTTCTGTACTTACTAGGGAAGGTTCATCCAAAGTAACTGTA
GACCCTTCACAAGCCAGTGGGTTTTCAAGGGTTTTGCAAGGTCAAGAAATATCGACCTTG
AGAGGCAATTTTGTAGAAAATAACGAGTCAGACTCTTCTGAGAAGCCACCTGTATGGCAA
CCATTACTGGATGACGAGAAGGCTGACGTTCATTCTGCATCAAGGAAATGTATATCAGAT
AAACGGTTTCCTTTAGCAAGGCCTGAATCATCTTTAACAGATCTTTTATCAGGTTTTGGG
GGGCAATCGAGTTCCTCTCATGGGTTCCATTCACCCACTAGGGGCCAAACAGCACCTGCT
AGCTGGGTTAAGCGACAAGCACTGGATAAGGAAACTGATTTCAGCTTACTGGGAAAACAA
TGGTCACTAGTGTCTTCTGGTCTCTCACTTAATCTGATGGATTCAGGATTGAAGGGTGCA
GATACTCTTTATCAAATGCGGGGAACATCAAGACTCAATGGTTTTAACGAGTATCCAACC
CTCCCTGGTCATAGAACTGACAATCAGCAGGGAAGTTGGTTAATGTCCCCGTCCGTGTTG
CCTTATATTCAGATGTCCACTCGTTCTGGAGAAATTATGCCTAAACCCATGGCTTCACCA
CAGCCCGAAGCCATGAAACCCAAAGAAGGGAACTGCAAACTATTTGGCATTCCCCTTGTA
AGTAAATGTGCTACCATAGATCCTGTCATGTTGCGGAAAAATTCTCCGATTGACTCAACA
AGTAACATGCATTTTGGTATACACCCACATCAATTCCCTATAACTGAATCTGATCAAAGG
TCTGAGCAATCAAAGGGATCAAAGCTACCAGATGACGGGATCACAGTTCATGATCAGGAA
GAACAATTCCAAACCTCTCATCCTGGTACTCGAGATAGAGAGGGCAAAGTCCTTGTTAAT
TCAACAAGGAGTTGCACCAAGGTTCATAAACAGGGTACAGCCCTTGGAAGGTCTGTGGAT
CTTGCAAAGTTCAACAACTATGAAGAATTGATAGCTGAACTGGATCACATTTTTGATTTT
AATGGTGAGCTCAAGGCTCGGAACAAGAACTGGCTGGTTGTATATACTGATGATGAGGGT
GACATGATGCTTGTTGGAGATGATCCATGGCAAGAATTTTGTGGTATGGTTCGCAAGATT
TTTATCTACACGAAAGATGAGGTGCAGCGGATGAACCCTGGGACTCTCAATTCAAAAGGC
GAGGACATTTCTTCTGTTGCAGAAGGCTCTGATGGTAAAGAAGTGAAGAATCTACAGCTT
CATTCTGATTCCAGTCCGGAAGATTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025462
PEP Infomation

pacid=37448809 transcript=PGSC0003DMT400037454 locus=PGSC0003DMG400014452 ID=PGSC0003DMT400037454.v4.03 annot-version=v4.03
Sequence

MATSESCRNATGAGKVDAEKALYTELWRACAGPLVTVPCEDELVFYFPQGHIEQVEASTN
QASDQQMPVYNLRSKILCRVINVLLKAEPDTDEVYAQVTLLPEPNQDENVVSKEPMPSPP
PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRF
RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNAPSSV
ISSHSMHLGVLATAWHAIQTKTLFTVYYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKM
RFEGEEAPEQRFTGTIVGIENADLKRWPESKWRCLKVRWDETSAIPRPDRVSPWKVEPAL
SPPALDPLPIPRQKRPRSNVLPSSPDSSVLTREGSSKVTVDPSQASGFSRVLQGQEISTL
RGNFVENNESDSSEKPPVWQPLLDDEKADVHSASRKCISDKRFPLARPESSLTDLLSGFG
GQSSSSHGFHSPTRGQTAPASWVKRQALDKETDFSLLGKQWSLVSSGLSLNLMDSGLKGA
DTLYQMRGTSRLNGFNEYPTLPGHRTDNQQGSWLMSPSVLPYIQMSTRSGEIMPKPMASP
QPEAMKPKEGNCKLFGIPLVSKCATIDPVMLRKNSPIDSTSNMHFGIHPHQFPITESDQR
SEQSKGSKLPDDGITVHDQEEQFQTSHPGTRDREGKVLVNSTRSCTKVHKQGTALGRSVD
LAKFNNYEELIAELDHIFDFNGELKARNKNWLVVYTDDEGDMMLVGDDPWQEFCGMVRKI
FIYTKDEVQRMNPGTLNSKGEDISSVAEGSDGKEVKNLQLHSDSSPEDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400037454
Transcript Infomation

pacid=37448809 locus=PGSC0003DMG400014452 ID=PGSC0003DMT400037454.v4.03 annot-version=v4.03
Sequence

ATGGCTACTTCTGAGAGTTGCCGGAATGCTACCGGCGCCGGAAAAGTTGATGCTGAGAAA
GCGTTGTACACGGAGCTATGGCGAGCATGTGCAGGTCCGCTTGTGACAGTGCCATGTGAA
GACGAGCTGGTGTTCTATTTCCCACAAGGTCATATTGAACAGGTTGAAGCATCAACAAAT
CAAGCATCAGACCAGCAGATGCCAGTATATAATCTTCGTTCTAAGATCCTCTGTCGTGTG
ATTAACGTCCTGCTGAAGGCTGAACCAGATACTGATGAGGTGTATGCACAAGTGACTTTG
TTGCCAGAACCAAATCAAGATGAGAATGTGGTATCAAAGGAACCGATGCCCTCTCCACCA
CCACGATTCCATGTGCACTCTTTTTGTAAGACATTAACAGCCTCTGATACCAGCACTCAT
GGAGGATTTTCTGTCTTGAGACGGCATGCTGATGAATGCCTCCCACCTCTGGATATGTCT
CGGCAGCCTCCAACACAGGAGTTGGTGGCCAAAGATTTGCATGCAAATGAGTGGCGCTTC
AGGCACATATTCCGGGGCCAGCCTAGGAGGCACCTTCTTCAGAGTGGTTGGAGTGTCTTT
GTTAGTTCGAAAAGGCTTGTTGCAGGGGATGCATTCATATTTCTTAGAGGTGAGAATGGG
GAGCTTCGTGTTGGAGTCCGACGTGCCATGAGACAGCAGGGTAATGCTCCATCATCAGTG
ATATCCAGTCATAGCATGCATCTTGGTGTCCTTGCTACAGCTTGGCATGCCATTCAGACG
AAAACACTGTTCACAGTATATTACAAACCAAGGACGAGCCCTGCTGAGTTTATAGTTCCA
TATGATCAGTATATGGAGTCTCTGAAAAACAATTACTCCATCGGGATGAGGTTTAAAATG
AGGTTTGAAGGTGAAGAAGCTCCAGAACAGAGGTTTACTGGAACTATAGTTGGCATTGAA
AATGCTGACCTCAAAAGGTGGCCCGAGTCGAAATGGAGATGCCTGAAGGTTCGATGGGAT
GAAACTTCTGCTATTCCTAGGCCAGACCGAGTTTCACCCTGGAAAGTAGAGCCAGCTCTT
AGCCCTCCTGCACTTGATCCACTTCCAATACCAAGGCAGAAAAGGCCTCGATCAAATGTT
CTGCCCTCGTCTCCTGATTCTTCTGTACTTACTAGGGAAGGTTCATCCAAAGTAACTGTA
GACCCTTCACAAGCCAGTGGGTTTTCAAGGGTTTTGCAAGGTCAAGAAATATCGACCTTG
AGAGGCAATTTTGTAGAAAATAACGAGTCAGACTCTTCTGAGAAGCCACCTGTATGGCAA
CCATTACTGGATGACGAGAAGGCTGACGTTCATTCTGCATCAAGGAAATGTATATCAGAT
AAACGGTTTCCTTTAGCAAGGCCTGAATCATCTTTAACAGATCTTTTATCAGGTTTTGGG
GGGCAATCGAGTTCCTCTCATGGGTTCCATTCACCCACTAGGGGCCAAACAGCACCTGCT
AGCTGGGTTAAGCGACAAGCACTGGATAAGGAAACTGATTTCAGCTTACTGGGAAAACAA
TGGTCACTAGTGTCTTCTGGTCTCTCACTTAATCTGATGGATTCAGGATTGAAGGGTGCA
GATACTCTTTATCAAATGCGGGGAACATCAAGACTCAATGGTTTTAACGAGTATCCAACC
CTCCCTGGTCATAGAACTGACAATCAGCAGGGAAGTTGGTTAATGTCCCCGTCCGTGTTG
CCTTATATTCAGATGTCCACTCGTTCTGGAGAAATTATGCCTAAACCCATGGCTTCACCA
CAGCCCGAAGCCATGAAACCCAAAGAAGGGAACTGCAAACTATTTGGCATTCCCCTTGTA
AGTAAATGTGCTACCATAGATCCTGTCATGTTGCGGAAAAATTCTCCGATTGACTCAACA
AGTAACATGCATTTTGGTATACACCCACATCAATTCCCTATAACTGAATCTGATCAAAGG
TCTGAGCAATCAAAGGGATCAAAGCTACCAGATGACGGGATCACAGTTCATGATCAGGAA
GAACAATTCCAAACCTCTCATCCTGGTACTCGAGATAGAGAGGGCAAAGTCCTTGTTAAT
TCAACAAGGAGTTGCACCAAGGTTCATAAACAGGGTACAGCCCTTGGAAGGTCTGTGGAT
CTTGCAAAGTTCAACAACTATGAAGAATTGATAGCTGAACTGGATCACATTTTTGATTTT
AATGGTGAGCTCAAGGCTCGGAACAAGAACTGGCTGGTTGTATATACTGATGATGAGGGT
GACATGATGCTTGTTGGAGATGATCCATGGCAAGAATTTTGTGGTATGGTTCGCAAGATT
TTTATCTACACGAAAGATGAGGTGCAGCGGATGAACCCTGGGACTCTCAATTCAAAAGGC
GAGGACATTTCTTCTGTTGCAGAAGGCTCTGATGGTAAAGAAGTGAAGAATCTACAGCTT
CATTCTGATTCCAGTCCGGAAGATTCTTAG