Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037427
CDS Infomation

pacid=37446580 polypeptide=PGSC0003DMP400025443 locus=PGSC0003DMG400014443 ID=PGSC0003DMT400037427.v4.03 annot-version=v4.03
Sequence

ATGGAGAATCTGGCTGGTTCTGCCGTATCCCAGACTTCCACCGCCACCGCGCCGCAGCCG
CAGACGGCTGATACCACCCCTTCACCGGCGTCACCACCGTCAGCCTCGAATCAAACCTCA
TCCGAAGAGAAAGACTCAAAATCTCCGGATTCACAGCTCGAAACCCTCTGCAAGACGATG
TGCGGCAAGGGACTTCGAAGTTACATAGTATCGAAACTCGCAGAGAAAAACACACTGCGC
GAAGAACTCACCAAGGCGTTGAAACTTGCACCCAACGCAGCAAAGCTTGTACTTAGCTGT
ATGGGAGACTTCTTTGCGAAAAGGGGCAAAGCTTTTGATAAGGATGCACAGATGATTGCC
ACGAGGGAAGCATCTGCATTGGTTTTGGAGTGTTTCTTGTTGATGGGTTTTGATGTAATT
GATGAAGGGGTAAAGGAAGAAGCTGCACAAGCAGCAGTGATATGGAGAAGAAGGTTTGTA
GATGAACGAGGTATAAGAAAGGCTAGTACAATGGATGCACGGGGATTGCTATTGCTTATT
GGGTGTTTTGGGATTCCACAAATTTTTTACAATGAGGATGTTAGGGACTTGATTCGAGTG
AGTAATATCAGAGAGATTTCTACTGCACTCAGGAGATCAAATGTGCTTATGGAAAAGATT
CCAGAAATAATAGAGGGCATGGTGAAGCATAAGATGGAAGTTGATGCTGTAGATGTTGCT
TATACTTTTGGAGTTGAGGAAAAATGTAGCCCTTGCGAAATTTTGTCATCGTTTTTAGAA
GAACTTAAAGAATCGCTGAAGAAAAAGAAATGCCAATCGCATGGTTCACATGCTGTTGTG
AATGAAGCAAACAAGAGGGAATTGTCTACTATGAAATCTGTCATCGAATGTTTGGATGCC
CACAACATTGATCCCTCAAAGCTTATTCCACGATTCCGTATCAGTGACAGAATTATGAGC
TTGGAGGAAAAAATTGCTAGGAATGATCAAAGAAGGGAGAAGATGGTGCAAAATCTGAAA
TTTGATGAAACTGGGTTATCTAGAAGGTTTGAAGAGAGACGAGCAAAACGCACACGCATA
CTAGGTGAAGAGTATCAAAGACCTGTAAATCACATCAGTAGCCAGAGACCCTTGTTAGCA
GGTCGACCTGCTAGCCACATTTATGGTTATTCTGTGTCACCATCAGCATTGCCTAGATCT
GTTGCAGGCCCGATTCATGACACTGTTCCTGGCTCACCAGCAGCAAGTCGGGGAGGTATG
GTTATGGGTGGAGTTAGTTCAGGTATAATAAGAAGCACAAATAACGCTCTACAAGCTGGC
GCATATGGTGGATTTCGTGGGAGGATACCATTTGAAGGTAAAGCTGGGCAAATAAGAAGT
TACAATAATCAGTTATATGAATGGCAAGAGAATGCATCCATGCATGAAAGGGAGGTCTCT
CACAACTATGGATACGGGTCATCACCATCGTGGCAAGGCTCTATGGAGTTGCCAAACCCC
GTTCCTGTTGGTCCTGGTTACCAGACCGCTGCTTCTGATCCTTATCAGTTGGCTAGTACT
GGTCGAAGTTCGCCATATCAGAACAGAGGTGTTGTTCCCTCTGTTTACCATTATTCATCC
TACTTGTACCCAGGGACATATTATCCCCAAGGCATGCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025443
PEP Infomation

pacid=37446580 transcript=PGSC0003DMT400037427 locus=PGSC0003DMG400014443 ID=PGSC0003DMT400037427.v4.03 annot-version=v4.03
Sequence

MENLAGSAVSQTSTATAPQPQTADTTPSPASPPSASNQTSSEEKDSKSPDSQLETLCKTM
CGKGLRSYIVSKLAEKNTLREELTKALKLAPNAAKLVLSCMGDFFAKRGKAFDKDAQMIA
TREASALVLECFLLMGFDVIDEGVKEEAAQAAVIWRRRFVDERGIRKASTMDARGLLLLI
GCFGIPQIFYNEDVRDLIRVSNIREISTALRRSNVLMEKIPEIIEGMVKHKMEVDAVDVA
YTFGVEEKCSPCEILSSFLEELKESLKKKKCQSHGSHAVVNEANKRELSTMKSVIECLDA
HNIDPSKLIPRFRISDRIMSLEEKIARNDQRREKMVQNLKFDETGLSRRFEERRAKRTRI
LGEEYQRPVNHISSQRPLLAGRPASHIYGYSVSPSALPRSVAGPIHDTVPGSPAASRGGM
VMGGVSSGIIRSTNNALQAGAYGGFRGRIPFEGKAGQIRSYNNQLYEWQENASMHEREVS
HNYGYGSSPSWQGSMELPNPVPVGPGYQTAASDPYQLASTGRSSPYQNRGVVPSVYHYSS
YLYPGTYYPQGMQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400037427
Transcript Infomation

pacid=37446580 locus=PGSC0003DMG400014443 ID=PGSC0003DMT400037427.v4.03 annot-version=v4.03
Sequence

ATGGAGAATCTGGCTGGTTCTGCCGTATCCCAGACTTCCACCGCCACCGCGCCGCAGCCG
CAGACGGCTGATACCACCCCTTCACCGGCGTCACCACCGTCAGCCTCGAATCAAACCTCA
TCCGAAGAGAAAGACTCAAAATCTCCGGATTCACAGCTCGAAACCCTCTGCAAGACGATG
TGCGGCAAGGGACTTCGAAGTTACATAGTATCGAAACTCGCAGAGAAAAACACACTGCGC
GAAGAACTCACCAAGGCGTTGAAACTTGCACCCAACGCAGCAAAGCTTGTACTTAGCTGT
ATGGGAGACTTCTTTGCGAAAAGGGGCAAAGCTTTTGATAAGGATGCACAGATGATTGCC
ACGAGGGAAGCATCTGCATTGGTTTTGGAGTGTTTCTTGTTGATGGGTTTTGATGTAATT
GATGAAGGGGTAAAGGAAGAAGCTGCACAAGCAGCAGTGATATGGAGAAGAAGGTTTGTA
GATGAACGAGGTATAAGAAAGGCTAGTACAATGGATGCACGGGGATTGCTATTGCTTATT
GGGTGTTTTGGGATTCCACAAATTTTTTACAATGAGGATGTTAGGGACTTGATTCGAGTG
AGTAATATCAGAGAGATTTCTACTGCACTCAGGAGATCAAATGTGCTTATGGAAAAGATT
CCAGAAATAATAGAGGGCATGGTGAAGCATAAGATGGAAGTTGATGCTGTAGATGTTGCT
TATACTTTTGGAGTTGAGGAAAAATGTAGCCCTTGCGAAATTTTGTCATCGTTTTTAGAA
GAACTTAAAGAATCGCTGAAGAAAAAGAAATGCCAATCGCATGGTTCACATGCTGTTGTG
AATGAAGCAAACAAGAGGGAATTGTCTACTATGAAATCTGTCATCGAATGTTTGGATGCC
CACAACATTGATCCCTCAAAGCTTATTCCACGATTCCGTATCAGTGACAGAATTATGAGC
TTGGAGGAAAAAATTGCTAGGAATGATCAAAGAAGGGAGAAGATGGTGCAAAATCTGAAA
TTTGATGAAACTGGGTTATCTAGAAGGTTTGAAGAGAGACGAGCAAAACGCACACGCATA
CTAGGTGAAGAGTATCAAAGACCTGTAAATCACATCAGTAGCCAGAGACCCTTGTTAGCA
GGTCGACCTGCTAGCCACATTTATGGTTATTCTGTGTCACCATCAGCATTGCCTAGATCT
GTTGCAGGCCCGATTCATGACACTGTTCCTGGCTCACCAGCAGCAAGTCGGGGAGGTATG
GTTATGGGTGGAGTTAGTTCAGGTATAATAAGAAGCACAAATAACGCTCTACAAGCTGGC
GCATATGGTGGATTTCGTGGGAGGATACCATTTGAAGGTAAAGCTGGGCAAATAAGAAGT
TACAATAATCAGTTATATGAATGGCAAGAGAATGCATCCATGCATGAAAGGGAGGTCTCT
CACAACTATGGATACGGGTCATCACCATCGTGGCAAGGCTCTATGGAGTTGCCAAACCCC
GTTCCTGTTGGTCCTGGTTACCAGACCGCTGCTTCTGATCCTTATCAGTTGGCTAGTACT
GGTCGAAGTTCGCCATATCAGAACAGAGGTGTTGTTCCCTCTGTTTACCATTATTCATCC
TACTTGTACCCAGGGACATATTATCCCCAAGGCATGCAGTAA