Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037426
CDS Infomation

pacid=37448707 polypeptide=PGSC0003DMP400025442 locus=PGSC0003DMG400014442 ID=PGSC0003DMT400037426.v4.03 annot-version=v4.03
Sequence

ATGTCTTTGATATGGGAAGTAGTAGTTGTAGTTAGTATTGTGTATGTGTTGTATGAGTTG
CTAAATATACATAATAGAAAAAAGTTACCTCCAGGTCCAAGAGGGCTTCCCATTCTTGGA
CATCTTCATTTGTTAGGGAAAAACCCTCACCATGATTTTCAAAACTTAGCCAAGAAACAT
GGTCCAATTATGTATATGAGACTAGGACTTGTACCTACAATCATTGTCTCGTCTACTGAT
GTAGCCGAGAAGATCCTCAAGACGTATGATCATATCTTTGCTAATAAGCCTCATAACGAG
GCAGCTCATTATTTGGCGTATGGACAGAAGAATATTATATTTGCAAAGTATGGACCATAC
TGGAGAAATATGCGTAAATTGTGCACTCAACATCTTTTGACTAATCAAAAGATCAATTCA
TTTCAATCCTTGAGAAGACAACAAGTTGAGCTTATGATCAAATCACTTCAAAATGAAGGT
CGTGTTGTTGTTGATCTTAGTGAAAGAGTCGCGTCCTTGAATGCTAACATGACTTGTTTG
ATGGTGTTTGGAAAGAAGTATATGGATCAAGATTTCGATAAGAGGGGATTTAAAGCTGTA
CTTCAAGAAGTTGTTCATTTAGCTGCAATAACTAATCTTGGAGATTTTTTCCCCTTTCTT
GGTGTAATTGATCTCCAAGGACTCACACGCCGACTCAAGGATCTTTCAAAGGTGTTTGAT
GAGTTTCTTGAGAAGATTATCAATGAACATGTCGAGTCTCGTGATGAAAATCAATCCAAA
GACTTTGTGGACACGATGTTGGACATTATGCAATCAGGAAAAATGGAATTTCAGTTTGAT
CGTATCCATATAAAAGCTGTCCTCTTCGTATGTTATTTCATCCTTCTAATAATAATAAGG
TCATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025442
PEP Infomation

pacid=37448707 transcript=PGSC0003DMT400037426 locus=PGSC0003DMG400014442 ID=PGSC0003DMT400037426.v4.03 annot-version=v4.03
Sequence

MSLIWEVVVVVSIVYVLYELLNIHNRKKLPPGPRGLPILGHLHLLGKNPHHDFQNLAKKH
GPIMYMRLGLVPTIIVSSTDVAEKILKTYDHIFANKPHNEAAHYLAYGQKNIIFAKYGPY
WRNMRKLCTQHLLTNQKINSFQSLRRQQVELMIKSLQNEGRVVVDLSERVASLNANMTCL
MVFGKKYMDQDFDKRGFKAVLQEVVHLAAITNLGDFFPFLGVIDLQGLTRRLKDLSKVFD
EFLEKIINEHVESRDENQSKDFVDTMLDIMQSGKMEFQFDRIHIKAVLFVCYFILLIIIR
SL*

Transcript Sequence

Transcript ID

PGSC0003DMT400037426
Transcript Infomation

pacid=37448707 locus=PGSC0003DMG400014442 ID=PGSC0003DMT400037426.v4.03 annot-version=v4.03
Sequence

ATGTCTTTGATATGGGAAGTAGTAGTTGTAGTTAGTATTGTGTATGTGTTGTATGAGTTG
CTAAATATACATAATAGAAAAAAGTTACCTCCAGGTCCAAGAGGGCTTCCCATTCTTGGA
CATCTTCATTTGTTAGGGAAAAACCCTCACCATGATTTTCAAAACTTAGCCAAGAAACAT
GGTCCAATTATGTATATGAGACTAGGACTTGTACCTACAATCATTGTCTCGTCTACTGAT
GTAGCCGAGAAGATCCTCAAGACGTATGATCATATCTTTGCTAATAAGCCTCATAACGAG
GCAGCTCATTATTTGGCGTATGGACAGAAGAATATTATATTTGCAAAGTATGGACCATAC
TGGAGAAATATGCGTAAATTGTGCACTCAACATCTTTTGACTAATCAAAAGATCAATTCA
TTTCAATCCTTGAGAAGACAACAAGTTGAGCTTATGATCAAATCACTTCAAAATGAAGGT
CGTGTTGTTGTTGATCTTAGTGAAAGAGTCGCGTCCTTGAATGCTAACATGACTTGTTTG
ATGGTGTTTGGAAAGAAGTATATGGATCAAGATTTCGATAAGAGGGGATTTAAAGCTGTA
CTTCAAGAAGTTGTTCATTTAGCTGCAATAACTAATCTTGGAGATTTTTTCCCCTTTCTT
GGTGTAATTGATCTCCAAGGACTCACACGCCGACTCAAGGATCTTTCAAAGGTGTTTGAT
GAGTTTCTTGAGAAGATTATCAATGAACATGTCGAGTCTCGTGATGAAAATCAATCCAAA
GACTTTGTGGACACGATGTTGGACATTATGCAATCAGGAAAAATGGAATTTCAGTTTGAT
CGTATCCATATAAAAGCTGTCCTCTTCGTATGTTATTTCATCCTTCTAATAATAATAAGG
TCATTGTAA