Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037390
CDS Infomation

pacid=37477972 polypeptide=PGSC0003DMP400025417 locus=PGSC0003DMG400014424 ID=PGSC0003DMT400037390.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTAGTATCCAAATCTTCAAAGCCCTCAAAACCCACACCACAATCATCATCA
GCACCCCCTTCAAGGTCATCATCATCATCTTCATCACTTTCAACCCATTTCGCCATGATT
GAGCTGAAGCAAAGAATCCTTACATCTATCTCTAAGCTCTCAGACAGAGATACCCATCAG
ATCGCTGTTGAAGACCTCGAGAAAATCATCCAAACTCTCTCAAACGACGGCGTTTCAATG
CTCCTTAACTGCCTTTACGATGCCAGCAACGACCCAAAACCTGCCGTTAAGAAAGAAACC
CTTCGGCTTCTCCCCACCGTATGTGCTTCGCACGGCGATTCTGCGGCGACCCATTTGACG
AAAATTATCGGCAACATTGTTAAAAGGCTGAAGGATTCGGATTCGGGTGTTAGGGACGCG
TGTCGTGATGCGATTGGCTCGTTGTCTTCGTTGTACTTGAAGGGAGAAGCTGAAAGTGGG
GGGATTGGGTCTGTAGTTGCTTTGTTTGTGAAGCCATTGTTTGAGGCAATGAATGAGAAT
AGCAAAACGGTTCAGAGTGGCGCTGCTTTGTGTATGGCTAAAGTGGTGGAATGTGCTTCG
GACCCGCCTGTATTGTCTTTTCAAAAGCTATGTCCAAGGATCTGCAAGTACCTTAACAAT
CCACATTTCGTGGCAAAGGCTTCTTTATTGCCTGTTGTTTCAAGCTTATCACAGGTAGGG
GCTATAGCACCGCAAAATTTGGAACCTTTACTGCAGACGATTCATGAATGCCTCAGCAAT
ACAGATTGGGCAACTCGTAAGGCTGCAGCTGATACATTAAGCGCCTTGGCATTGAATTCA
AGCAACTTGGTAGCAGGGGGAGCTACTTCCACTTTAACTGTGCTTGAAGCTTCTCGGTTT
GACAAGATAAAACCTGTGAGAGATAGTATGTTGGAAGCTTTGCAGCACTGGAAGAAAATT
GCAGGGAAAGAAGATGGAGCCACAGATGATCAGAAAACTTCATGTATTGATGGCGAATCT
TCTGAATCTGCCGGATCGTCAGAAAAGGACCTCCGAAATGCTGTGGGCATATTAAAGAAG
AGAGGTCCTGCTTTGTCAGACAGAAAATTGAACCCAGAATTCTTTCAGAAACTTGAAGAA
AGGAGTTCAAATGATTTGCCTGTGGAAGTGGTTGTCCCTCGTCAATGTCTTAATGCATCT
AATACACCAACTGAAGTAGAGTCTGTGTCAGAGAAAGCAGAAACAGGACAGAGAATAATG
AGGAAAAGCCAGATTGATGCTAGGTATAGTAACACGGAGAGTCAAACTTCTGGGGTAAGT
GGCAGAGCACATGATACTGTTGATGAGGGAGATTTGAATCAGAGGGAACAATCCAGTTAC
CGTACTGGTTTTGCAAAAAATGCTGGTCCGCCTGAGGGGTTTATGGCTAACAAAGGAAAC
TGGCTTGCTATTCAAAGACAATTGTTACTTCTGGAGAGACAGCAGGCTCATCTGACGAAT
ATGTTGCAGGATTTCATGGGTGGATCTCATGGTAGCATGGTGGCTCTCGAGAACAGAGTA
CGTGGTCTCGAAAGAGTCGTTGAAGACATGGCACGTGATTTATCTCTTTCAGCAGGTCGA
AGAGGTGGTGCTTTTACGGCAAGATTTGATGAATCTCTTAATAGGCCCCTTGGGAAGTAT
AATAGCTTCCATGATTACTCTAGTACCAAGCTAGGTAGAGGTAGTGAAGGGAGCATACCA
TTTGGAGAGAGGTTTGTACCATCTGATGGTAATTCATTGGGTATGAGGGGAAGGAGCCCA
CCACGTAGATCTGATAATCCTGATGCTTGGGACTTCCATTCATATGGTAAGTATGGGCAA
TCAGGATCTAGGAGAGGTATTGGTGGTGGTCCCATGGATGCTAGGCCATCTAAACTAGAA
AACGAGATAGATCAGGTTGGCACAAGGAGGGGATGGGCCAAAGGAGCAGGACCTGTTAGG
TTTGGCGAGGGACCTTCTGCTAGAAGTATCTGGCAAGCTTCAAAGGATGAAGCAACTTTG
GAGGCAATCCGTGTGGCTGGTGATGACAATGGAACTGCTCGAGGTACTAGAGTAGCTATT
CCAGAATTAGAGGCTGAAGCACTAACAGATGACAGTAATATGCAAGAGCGTGATCCAGTT
TGGACTTCCTGGACCAATGCAATGGATGCATTTTCTGTGGGTGATATGGATTCAGCATTT
TCTGAAGTTTTATCTACTGGAGATGATTTCTTGCTTGTGAAGCTGATGGATAGATCAGGT
CCAGTGATTGATCAACTGTCCAATGAGGTGGCAAGTGAGGCTTTGCATGCTGTTGCCCAG
TTTCTTCTGGAGCCAAACCTGACAGACATCTGTTTATCTTGGGTCCAACAGTTGCTAGAA
ATTGTCATAGAAAATGGACCTGAGGTAGTGGACCTTCCTATGGAAGTGAAAAAAGAGCTG
CTGTTAAATTTGAACGAAATTTCATCATCAGTAGACCTGCCTGAGGACTGGGAAGGTGCA
ACACCAGAGCAACTGTTGTTGCAGTTGGCATCTGCTTGGGATATTGATCTGCAAGAGCTG
GAGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025417
PEP Infomation

pacid=37477972 transcript=PGSC0003DMT400037390 locus=PGSC0003DMG400014424 ID=PGSC0003DMT400037390.v4.03 annot-version=v4.03
Sequence

MASLVSKSSKPSKPTPQSSSAPPSRSSSSSSSLSTHFAMIELKQRILTSISKLSDRDTHQ
IAVEDLEKIIQTLSNDGVSMLLNCLYDASNDPKPAVKKETLRLLPTVCASHGDSAATHLT
KIIGNIVKRLKDSDSGVRDACRDAIGSLSSLYLKGEAESGGIGSVVALFVKPLFEAMNEN
SKTVQSGAALCMAKVVECASDPPVLSFQKLCPRICKYLNNPHFVAKASLLPVVSSLSQVG
AIAPQNLEPLLQTIHECLSNTDWATRKAAADTLSALALNSSNLVAGGATSTLTVLEASRF
DKIKPVRDSMLEALQHWKKIAGKEDGATDDQKTSCIDGESSESAGSSEKDLRNAVGILKK
RGPALSDRKLNPEFFQKLEERSSNDLPVEVVVPRQCLNASNTPTEVESVSEKAETGQRIM
RKSQIDARYSNTESQTSGVSGRAHDTVDEGDLNQREQSSYRTGFAKNAGPPEGFMANKGN
WLAIQRQLLLLERQQAHLTNMLQDFMGGSHGSMVALENRVRGLERVVEDMARDLSLSAGR
RGGAFTARFDESLNRPLGKYNSFHDYSSTKLGRGSEGSIPFGERFVPSDGNSLGMRGRSP
PRRSDNPDAWDFHSYGKYGQSGSRRGIGGGPMDARPSKLENEIDQVGTRRGWAKGAGPVR
FGEGPSARSIWQASKDEATLEAIRVAGDDNGTARGTRVAIPELEAEALTDDSNMQERDPV
WTSWTNAMDAFSVGDMDSAFSEVLSTGDDFLLVKLMDRSGPVIDQLSNEVASEALHAVAQ
FLLEPNLTDICLSWVQQLLEIVIENGPEVVDLPMEVKKELLLNLNEISSSVDLPEDWEGA
TPEQLLLQLASAWDIDLQELEK*

Transcript Sequence

Transcript ID

PGSC0003DMT400037390
Transcript Infomation

pacid=37477972 locus=PGSC0003DMG400014424 ID=PGSC0003DMT400037390.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTAGTATCCAAATCTTCAAAGCCCTCAAAACCCACACCACAATCATCATCA
GCACCCCCTTCAAGGTCATCATCATCATCTTCATCACTTTCAACCCATTTCGCCATGATT
GAGCTGAAGCAAAGAATCCTTACATCTATCTCTAAGCTCTCAGACAGAGATACCCATCAG
ATCGCTGTTGAAGACCTCGAGAAAATCATCCAAACTCTCTCAAACGACGGCGTTTCAATG
CTCCTTAACTGCCTTTACGATGCCAGCAACGACCCAAAACCTGCCGTTAAGAAAGAAACC
CTTCGGCTTCTCCCCACCGTATGTGCTTCGCACGGCGATTCTGCGGCGACCCATTTGACG
AAAATTATCGGCAACATTGTTAAAAGGCTGAAGGATTCGGATTCGGGTGTTAGGGACGCG
TGTCGTGATGCGATTGGCTCGTTGTCTTCGTTGTACTTGAAGGGAGAAGCTGAAAGTGGG
GGGATTGGGTCTGTAGTTGCTTTGTTTGTGAAGCCATTGTTTGAGGCAATGAATGAGAAT
AGCAAAACGGTTCAGAGTGGCGCTGCTTTGTGTATGGCTAAAGTGGTGGAATGTGCTTCG
GACCCGCCTGTATTGTCTTTTCAAAAGCTATGTCCAAGGATCTGCAAGTACCTTAACAAT
CCACATTTCGTGGCAAAGGCTTCTTTATTGCCTGTTGTTTCAAGCTTATCACAGGTAGGG
GCTATAGCACCGCAAAATTTGGAACCTTTACTGCAGACGATTCATGAATGCCTCAGCAAT
ACAGATTGGGCAACTCGTAAGGCTGCAGCTGATACATTAAGCGCCTTGGCATTGAATTCA
AGCAACTTGGTAGCAGGGGGAGCTACTTCCACTTTAACTGTGCTTGAAGCTTCTCGGTTT
GACAAGATAAAACCTGTGAGAGATAGTATGTTGGAAGCTTTGCAGCACTGGAAGAAAATT
GCAGGGAAAGAAGATGGAGCCACAGATGATCAGAAAACTTCATGTATTGATGGCGAATCT
TCTGAATCTGCCGGATCGTCAGAAAAGGACCTCCGAAATGCTGTGGGCATATTAAAGAAG
AGAGGTCCTGCTTTGTCAGACAGAAAATTGAACCCAGAATTCTTTCAGAAACTTGAAGAA
AGGAGTTCAAATGATTTGCCTGTGGAAGTGGTTGTCCCTCGTCAATGTCTTAATGCATCT
AATACACCAACTGAAGTAGAGTCTGTGTCAGAGAAAGCAGAAACAGGACAGAGAATAATG
AGGAAAAGCCAGATTGATGCTAGGTATAGTAACACGGAGAGTCAAACTTCTGGGGTAAGT
GGCAGAGCACATGATACTGTTGATGAGGGAGATTTGAATCAGAGGGAACAATCCAGTTAC
CGTACTGGTTTTGCAAAAAATGCTGGTCCGCCTGAGGGGTTTATGGCTAACAAAGGAAAC
TGGCTTGCTATTCAAAGACAATTGTTACTTCTGGAGAGACAGCAGGCTCATCTGACGAAT
ATGTTGCAGGATTTCATGGGTGGATCTCATGGTAGCATGGTGGCTCTCGAGAACAGAGTA
CGTGGTCTCGAAAGAGTCGTTGAAGACATGGCACGTGATTTATCTCTTTCAGCAGGTCGA
AGAGGTGGTGCTTTTACGGCAAGATTTGATGAATCTCTTAATAGGCCCCTTGGGAAGTAT
AATAGCTTCCATGATTACTCTAGTACCAAGCTAGGTAGAGGTAGTGAAGGGAGCATACCA
TTTGGAGAGAGGTTTGTACCATCTGATGGTAATTCATTGGGTATGAGGGGAAGGAGCCCA
CCACGTAGATCTGATAATCCTGATGCTTGGGACTTCCATTCATATGGTAAGTATGGGCAA
TCAGGATCTAGGAGAGGTATTGGTGGTGGTCCCATGGATGCTAGGCCATCTAAACTAGAA
AACGAGATAGATCAGGTTGGCACAAGGAGGGGATGGGCCAAAGGAGCAGGACCTGTTAGG
TTTGGCGAGGGACCTTCTGCTAGAAGTATCTGGCAAGCTTCAAAGGATGAAGCAACTTTG
GAGGCAATCCGTGTGGCTGGTGATGACAATGGAACTGCTCGAGGTACTAGAGTAGCTATT
CCAGAATTAGAGGCTGAAGCACTAACAGATGACAGTAATATGCAAGAGCGTGATCCAGTT
TGGACTTCCTGGACCAATGCAATGGATGCATTTTCTGTGGGTGATATGGATTCAGCATTT
TCTGAAGTTTTATCTACTGGAGATGATTTCTTGCTTGTGAAGCTGATGGATAGATCAGGT
CCAGTGATTGATCAACTGTCCAATGAGGTGGCAAGTGAGGCTTTGCATGCTGTTGCCCAG
TTTCTTCTGGAGCCAAACCTGACAGACATCTGTTTATCTTGGGTCCAACAGTTGCTAGAA
ATTGTCATAGAAAATGGACCTGAGGTAGTGGACCTTCCTATGGAAGTGAAAAAAGAGCTG
CTGTTAAATTTGAACGAAATTTCATCATCAGTAGACCTGCCTGAGGACTGGGAAGGTGCA
ACACCAGAGCAACTGTTGTTGCAGTTGGCATCTGCTTGGGATATTGATCTGCAAGAGCTG
GAGAAGTAG