Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037342
CDS Infomation

pacid=37479124 polypeptide=PGSC0003DMP400025380 locus=PGSC0003DMG400014409 ID=PGSC0003DMT400037342.v4.03 annot-version=v4.03
Sequence

ATGGATGATTATCAGGAGATGGAGAGGTTTGGTATGGAGAACGATTTTGAAGATGGACAG
TGGATCGGTGGTGAATTCTACTATCGGAAACGTAAAGAGAAAAAGCAAGTTCAAACCAAA
GATGATACGCTCTATGGTGTTTTTGCTTCTGGCGATAGTGATTCTGACTACGAAGGATCA
TCCTCTAAGAAGCGAAAAAAAGGTTTTTCATCGAAACCTGACCTAACCAAACCTGTTAAT
TTTGTATCAACTGGAATTGTTATGCCTAACAAAGAAATTGATCAGAATTCCAAAGAGGAG
AATGAGGAGCAGCTAATGCCAGAAGAAGAGAATAAAGGTTTAGGATTGGGATTTGGGGCA
GCATCTGTTGGCGGCCTTGGATTTGGTACTAGTAGTAGTTCGAATAATAATAATAATAAT
AATGCTGATGAGGTTAAAGCTGATGGGGGAAACTTTCTGCCCACTGCTTTTGGTAGGAAG
ATCAAAGAAGGTGCACTAAGACGTGAGAAGGAAAGGGAAAAGGAGAAATCTATGTTGGCG
AAGAAATCTTCGCCGTCTGAATCAGGGAGAAGGGAACCTGGTGGTGATGTTGGTGGCTTT
GAGAAGTTTACCAAAGGGATAGGGATGAAGTTGCTTGAGAAGATGGGTTATAAGGGAGGT
GGATTGGGTAAAAATGAGCAAGGAATTGTGGCTCCGATTGAGGCAAAGCTGAGACCTAAG
AAGATGGGAATGGGATTTAATGACTACAAGGAGACTAGTAGTGCACCAGCTCTTCAAGAA
TCAGATGGAAAGCAGACTGTTGCTCGTCCTGCTATACTACATGTGGAAGGTCGATCAAAA
GAGAAGCTTTGGTCAAAGCAAGCTAAAAAAGTGAAGAAGGTTTATGTTACAGCTGAAGAG
TTGTTGGCCAAAAAGCAGGAGCAAGGCCTGGAAACTGTTCAGAAGGTGTTTGATATGAGA
GGTCCACAGGTTCGAGTCTTGACGAATCTGGAGAACTTGAACGCCGAAGAAAAAGCAAGG
GAGAATGATGTTCCAATGCCCGAACTTCAGCATAATATCAGGTTGATTGTGGACTTGGCA
GAACTTGACATACAAAAGATTGATAGTGATTTGAGAAATGAGATGGAGACAGTTGTTGCT
TTGCAAAAGGAGAAGGAGAAGCTTCAAGCTGAGGCAGCTCGTCAAAAAAGGCAGTTTGAT
AATATGGAAGAGATTGTAGGTGTATTGGACCGGATAGGGGAAGAGAGCACATCTGGTACC
CTGACCCTAGACTCCCTTGCAAAAGCATTTGCAGACTTACAGCAGCAGTATGTTGAGGAA
TACACACTCTGCAACTTGTCAAGCATAGCGTGCTCATACGCTCTGCCATTGTTCATTCGA
ATTTTTCAGGGATGGGATCCACTTCAAACTCCAACACATGGATTGGAGGTGGTTTCACTG
TGGAAGGATCTTTTGCAAGGTAATGACATTTTTGCTATCTCTGATGCTGCATCTCCTTAT
ACTCAACTATTTATGGAAGTTGTGTTCCCTGCTGTTAGAATATCTGGCACCAATACCTGG
CAGGCTAGGGACCCTGAACCAATGCTTCGTTTTTTGGATTCTTGGGAGAAGCTATTGCCT
TCTTCAGTTCTTCAGTCAATACTGGAAAACATTATTTTGCCCAAGTTATCAGCTGCTGTA
AACTCCTGGGATCCACGTCGCGAAACAGTTCCAATACATTCCTGGGTTCATCCATGGTTG
CCCTTATTGGGTCAAAGATTGGAAAGTTGCTACCACACTATACGTAGCAGATTGGAAAGC
GTACTGCATGCTTGGCACCCAAGTGATATGTCTGCATACTACATACTGTCTCCTTGGAAG
ACTGTTTTTGATGCAATTAACTGGGAAAAACTAATGGTCCGATTTATTGTTCCAAAGTTG
TTAGCAGTGATGCATGAATTCCAAATAAATCCAGCAAATCAGAACCTTGATCAGTTCTAT
TGGGTCCGTACTTGGGCTACTGCTATTCCCATCCATCACATGCTTCCAATACTGGATATA
TTCTTCAACAAGTGGCAAGAAGTTTTGTACCACTGGTTATGCTCAAACCCGAACTTTGAA
GAAGTCACGAAATGGTATTTGGGTTGGAAGGAACTTATTCCACCAGAGCTTCAGGCAAAT
GAACACATTCGCTATCGACTAAATCTTGCTCTAGACATGATGAACCAGGCTGTTGAAGGC
TTGGAGGTCGTTCAGCCTGGTTTGAGGGAGAACATAAGTTATCTTAGGGTTCTTGAACAA
AGGCAATTTGAGACTCAGAAAAAAGCAGCAGTACAAGCTCAATCCCGTCCTTCTGTGGGC
TCGAACAGTGGTATCCAAATGGATGGTGGGGTTGACATGAGCATGAAAGAAGTTATTGAA
GTTCATGCTCAAGAGAATGGTTTGCTGTTCAAGCCTAAGCCTGGCAGGATGCAAGATGGT
CATCAGATATATGGTTTTGGTAACATCAGTATTATTATAGATTCTCTCAATCAGAAGGTA
TTTGCGCAAGTTGAGGACAGGTGGTCTTTTGTGTCACTTGAGCAGCTGTTGGACCTGCAT
AATCGATCTGGGTCAAAGCGTCGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400025380
PEP Infomation

pacid=37479124 transcript=PGSC0003DMT400037342 locus=PGSC0003DMG400014409 ID=PGSC0003DMT400037342.v4.03 annot-version=v4.03
Sequence

MDDYQEMERFGMENDFEDGQWIGGEFYYRKRKEKKQVQTKDDTLYGVFASGDSDSDYEGS
SSKKRKKGFSSKPDLTKPVNFVSTGIVMPNKEIDQNSKEENEEQLMPEEENKGLGLGFGA
ASVGGLGFGTSSSSNNNNNNNADEVKADGGNFLPTAFGRKIKEGALRREKEREKEKSMLA
KKSSPSESGRREPGGDVGGFEKFTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPK
KMGMGFNDYKETSSAPALQESDGKQTVARPAILHVEGRSKEKLWSKQAKKVKKVYVTAEE
LLAKKQEQGLETVQKVFDMRGPQVRVLTNLENLNAEEKARENDVPMPELQHNIRLIVDLA
ELDIQKIDSDLRNEMETVVALQKEKEKLQAEAARQKRQFDNMEEIVGVLDRIGEESTSGT
LTLDSLAKAFADLQQQYVEEYTLCNLSSIACSYALPLFIRIFQGWDPLQTPTHGLEVVSL
WKDLLQGNDIFAISDAASPYTQLFMEVVFPAVRISGTNTWQARDPEPMLRFLDSWEKLLP
SSVLQSILENIILPKLSAAVNSWDPRRETVPIHSWVHPWLPLLGQRLESCYHTIRSRLES
VLHAWHPSDMSAYYILSPWKTVFDAINWEKLMVRFIVPKLLAVMHEFQINPANQNLDQFY
WVRTWATAIPIHHMLPILDIFFNKWQEVLYHWLCSNPNFEEVTKWYLGWKELIPPELQAN
EHIRYRLNLALDMMNQAVEGLEVVQPGLRENISYLRVLEQRQFETQKKAAVQAQSRPSVG
SNSGIQMDGGVDMSMKEVIEVHAQENGLLFKPKPGRMQDGHQIYGFGNISIIIDSLNQKV
FAQVEDRWSFVSLEQLLDLHNRSGSKRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400037342
Transcript Infomation

pacid=37479124 locus=PGSC0003DMG400014409 ID=PGSC0003DMT400037342.v4.03 annot-version=v4.03
Sequence

ATGGATGATTATCAGGAGATGGAGAGGTTTGGTATGGAGAACGATTTTGAAGATGGACAG
TGGATCGGTGGTGAATTCTACTATCGGAAACGTAAAGAGAAAAAGCAAGTTCAAACCAAA
GATGATACGCTCTATGGTGTTTTTGCTTCTGGCGATAGTGATTCTGACTACGAAGGATCA
TCCTCTAAGAAGCGAAAAAAAGGTTTTTCATCGAAACCTGACCTAACCAAACCTGTTAAT
TTTGTATCAACTGGAATTGTTATGCCTAACAAAGAAATTGATCAGAATTCCAAAGAGGAG
AATGAGGAGCAGCTAATGCCAGAAGAAGAGAATAAAGGTTTAGGATTGGGATTTGGGGCA
GCATCTGTTGGCGGCCTTGGATTTGGTACTAGTAGTAGTTCGAATAATAATAATAATAAT
AATGCTGATGAGGTTAAAGCTGATGGGGGAAACTTTCTGCCCACTGCTTTTGGTAGGAAG
ATCAAAGAAGGTGCACTAAGACGTGAGAAGGAAAGGGAAAAGGAGAAATCTATGTTGGCG
AAGAAATCTTCGCCGTCTGAATCAGGGAGAAGGGAACCTGGTGGTGATGTTGGTGGCTTT
GAGAAGTTTACCAAAGGGATAGGGATGAAGTTGCTTGAGAAGATGGGTTATAAGGGAGGT
GGATTGGGTAAAAATGAGCAAGGAATTGTGGCTCCGATTGAGGCAAAGCTGAGACCTAAG
AAGATGGGAATGGGATTTAATGACTACAAGGAGACTAGTAGTGCACCAGCTCTTCAAGAA
TCAGATGGAAAGCAGACTGTTGCTCGTCCTGCTATACTACATGTGGAAGGTCGATCAAAA
GAGAAGCTTTGGTCAAAGCAAGCTAAAAAAGTGAAGAAGGTTTATGTTACAGCTGAAGAG
TTGTTGGCCAAAAAGCAGGAGCAAGGCCTGGAAACTGTTCAGAAGGTGTTTGATATGAGA
GGTCCACAGGTTCGAGTCTTGACGAATCTGGAGAACTTGAACGCCGAAGAAAAAGCAAGG
GAGAATGATGTTCCAATGCCCGAACTTCAGCATAATATCAGGTTGATTGTGGACTTGGCA
GAACTTGACATACAAAAGATTGATAGTGATTTGAGAAATGAGATGGAGACAGTTGTTGCT
TTGCAAAAGGAGAAGGAGAAGCTTCAAGCTGAGGCAGCTCGTCAAAAAAGGCAGTTTGAT
AATATGGAAGAGATTGTAGGTGTATTGGACCGGATAGGGGAAGAGAGCACATCTGGTACC
CTGACCCTAGACTCCCTTGCAAAAGCATTTGCAGACTTACAGCAGCAGTATGTTGAGGAA
TACACACTCTGCAACTTGTCAAGCATAGCGTGCTCATACGCTCTGCCATTGTTCATTCGA
ATTTTTCAGGGATGGGATCCACTTCAAACTCCAACACATGGATTGGAGGTGGTTTCACTG
TGGAAGGATCTTTTGCAAGGTAATGACATTTTTGCTATCTCTGATGCTGCATCTCCTTAT
ACTCAACTATTTATGGAAGTTGTGTTCCCTGCTGTTAGAATATCTGGCACCAATACCTGG
CAGGCTAGGGACCCTGAACCAATGCTTCGTTTTTTGGATTCTTGGGAGAAGCTATTGCCT
TCTTCAGTTCTTCAGTCAATACTGGAAAACATTATTTTGCCCAAGTTATCAGCTGCTGTA
AACTCCTGGGATCCACGTCGCGAAACAGTTCCAATACATTCCTGGGTTCATCCATGGTTG
CCCTTATTGGGTCAAAGATTGGAAAGTTGCTACCACACTATACGTAGCAGATTGGAAAGC
GTACTGCATGCTTGGCACCCAAGTGATATGTCTGCATACTACATACTGTCTCCTTGGAAG
ACTGTTTTTGATGCAATTAACTGGGAAAAACTAATGGTCCGATTTATTGTTCCAAAGTTG
TTAGCAGTGATGCATGAATTCCAAATAAATCCAGCAAATCAGAACCTTGATCAGTTCTAT
TGGGTCCGTACTTGGGCTACTGCTATTCCCATCCATCACATGCTTCCAATACTGGATATA
TTCTTCAACAAGTGGCAAGAAGTTTTGTACCACTGGTTATGCTCAAACCCGAACTTTGAA
GAAGTCACGAAATGGTATTTGGGTTGGAAGGAACTTATTCCACCAGAGCTTCAGGCAAAT
GAACACATTCGCTATCGACTAAATCTTGCTCTAGACATGATGAACCAGGCTGTTGAAGGC
TTGGAGGTCGTTCAGCCTGGTTTGAGGGAGAACATAAGTTATCTTAGGGTTCTTGAACAA
AGGCAATTTGAGACTCAGAAAAAAGCAGCAGTACAAGCTCAATCCCGTCCTTCTGTGGGC
TCGAACAGTGGTATCCAAATGGATGGTGGGGTTGACATGAGCATGAAAGAAGTTATTGAA
GTTCATGCTCAAGAGAATGGTTTGCTGTTCAAGCCTAAGCCTGGCAGGATGCAAGATGGT
CATCAGATATATGGTTTTGGTAACATCAGTATTATTATAGATTCTCTCAATCAGAAGGTA
TTTGCGCAAGTTGAGGACAGGTGGTCTTTTGTGTCACTTGAGCAGCTGTTGGACCTGCAT
AATCGATCTGGGTCAAAGCGTCGATAG