Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037336
CDS Infomation

pacid=37480309 polypeptide=PGSC0003DMP400025374 locus=PGSC0003DMG400014405 ID=PGSC0003DMT400037336.v4.03 annot-version=v4.03
Sequence

ATGGCGGATACGGAGACGTTTGCTTTTCAGGCTGAGATTAACCAGCTTTTGAGTTTAATC
ATCAATACGTTCTACAGTAACAAGGAGATCTTTCTTCGGGAACTCATTAGCAATGCTTCC
GATGCTTTGGACAAGATTCGCTTTGAGAGCTTGACAGACAAGAGCAAGCTAGATGCTCAA
CCTGAACTTTTTATCCACATTATTCCTGACAAGACCAACAATACCTTGACCATCATTGAC
AGTGGTATTGGGATGACAAAGGCTGATCTTGTGAACAACCTTGGTACAATTGCAAGGTCA
GGGACCAAGGAATTCATGGAAGCTATAGCAGCCGGTGCAGATGTTAGCATGATTGGGCAA
TTTGGTGTTGGTTTCTATTCAGCTTACTTGGTGGCTGAGAAGGTTATTGTGACTACAAAG
CACAATGATGATGAACAGTATGTGTGGGAGTCTCAAGCTGGTGGTTCATTCACTGTCGCC
AGGGACACTTCTGGTGAGAGCCTTGGTAGGGGTACAAAAATGATCCTGTATCTCAAGGAG
GATCAGCTTGAATATCTCGAAGAGCGCAGGCTCAAGGATCTGATTAAGAAGCACTCAGAG
TTCATCAGTTACCCAATCTCTCTTTGGGTTGAGAAGACCATTGAAAAGGAGATCTCTGAT
GATGAGGATGAAGAGGAGAAGAAAGATGAGGAAGGAAAGGTAGAGGAGGTTGATGAGGAA
AAAGAGAAGGATGAGAAGAAAAAGAAGAAAATTAAGGAAGTAACTAATGAGTGGTCATTG
GTGAACAAACAGAAGCCTATTTGGATGAGGAAGCCAGAGGAGATCTCAAAGGAAGAATAT
GCTGCATTCTACAAGAGTCTGACCAATGACTGGGAGGAACATTTGGCTGTGAAGCACTTC
TCTGTTGAGGGCCAGTTGGAGTTTAAAGCTGTTCTTTTTGTTCCAAAAAGGGCTCCTTTT
GACCTTTTTGACACAAAAAAGAAACAAAACAACATCAAGTTGTATGTTCGTCGTGTGTTC
ATCATGGATAACTGTGAAGAGTTAATTCCTGAATTTCTGAGTTTTGTGAAGGGTATTGTG
GATTCTGAGGACCTTCCTCTTAACATCTCTAGAGAGACGTTACAGCAGAACAAGATCTTG
AAGGTTATTCGCAAGAACTTGGTTAAGAAGTGCATTGAGCTATTCTTTGAAATTGCCGAG
AACAAGGAAGACTATGACAAGTTTTACGAGGCTTTCTCAAAGAATCTCAAGCTTGGTATC
CATGAAGATTCACAGAACAGGACCAAGATTGCTGAGTTGCTGAGGTACCATTCCACGAAG
AGTGGTGATGAAATGACCAGCTTGAAGGACTATGTGACTAGGATGAAGGAAGGCCAGAAT
GATATATTCTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAG
AAGCTGAAGAAGAAGGGCTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTACTGT
ATCGGTCAGCTGAAGGAATTTGAGGGTAAAAAGCTTGTTTCTGCTACCAAGGAAGGTCTC
AAACTCGATGAAAGTGAGGATGAGAAGAAAAAGAAAGAAGAATTGAAGGAGAAGTTTGAG
GGCCTTTGCAAGGTGATCAAGGATGTGCTTGGTGACAAGGTTGAAAAGGTCGTCGTTTCA
GACCGTGTTGTGGACTCTCCCTGCTGTTTGGTTACTGGTGAGTATGGCTGGACTGCCAAC
ATGGAGAGAATCATGAAAGCACAAGCACTCAGGGATTCTAGCATGGCTGGATACATGTCT
AGCAAGAAGACCATGGAGATAAACCCAGAGAATGCCATCATGGATGAGCTCAGGAAGAGG
GCTGATGCAGACAAGAATGACAAGTCCGTCAAGGATTTAGTAATGTTGCTGTTTGAGACT
GCTCTTCTCACCTCAGGTTTCAGCCTCGATGATCCCAACACCTTCGGCAATAGAATTCAC
AGAATGCTGAAACTTGGGCTCAGCATTGACGAGGATGCCAGTGATGTTGATGTCGATATG
CCAGCACTTGAGGATCCTGAAGCAGATGCCGAGGGTAGCAAAATGGAAGAAGTCGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025374
PEP Infomation

pacid=37480309 transcript=PGSC0003DMT400037336 locus=PGSC0003DMG400014405 ID=PGSC0003DMT400037336.v4.03 annot-version=v4.03
Sequence

MADTETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQ
PELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ
FGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVARDTSGESLGRGTKMILYLKE
DQLEYLEERRLKDLIKKHSEFISYPISLWVEKTIEKEISDDEDEEEKKDEEGKVEEVDEE
KEKDEKKKKKIKEVTNEWSLVNKQKPIWMRKPEEISKEEYAAFYKSLTNDWEEHLAVKHF
SVEGQLEFKAVLFVPKRAPFDLFDTKKKQNNIKLYVRRVFIMDNCEELIPEFLSFVKGIV
DSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFFEIAENKEDYDKFYEAFSKNLKLGI
HEDSQNRTKIAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIFYITGESKKAVENSPFLE
KLKKKGYEVLYMVDAIDEYCIGQLKEFEGKKLVSATKEGLKLDESEDEKKKKEELKEKFE
GLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMS
SKKTMEINPENAIMDELRKRADADKNDKSVKDLVMLLFETALLTSGFSLDDPNTFGNRIH
RMLKLGLSIDEDASDVDVDMPALEDPEADAEGSKMEEVD*

Transcript Sequence

Transcript ID

PGSC0003DMT400037336
Transcript Infomation

pacid=37480309 locus=PGSC0003DMG400014405 ID=PGSC0003DMT400037336.v4.03 annot-version=v4.03
Sequence

ATGGCGGATACGGAGACGTTTGCTTTTCAGGCTGAGATTAACCAGCTTTTGAGTTTAATC
ATCAATACGTTCTACAGTAACAAGGAGATCTTTCTTCGGGAACTCATTAGCAATGCTTCC
GATGCTTTGGACAAGATTCGCTTTGAGAGCTTGACAGACAAGAGCAAGCTAGATGCTCAA
CCTGAACTTTTTATCCACATTATTCCTGACAAGACCAACAATACCTTGACCATCATTGAC
AGTGGTATTGGGATGACAAAGGCTGATCTTGTGAACAACCTTGGTACAATTGCAAGGTCA
GGGACCAAGGAATTCATGGAAGCTATAGCAGCCGGTGCAGATGTTAGCATGATTGGGCAA
TTTGGTGTTGGTTTCTATTCAGCTTACTTGGTGGCTGAGAAGGTTATTGTGACTACAAAG
CACAATGATGATGAACAGTATGTGTGGGAGTCTCAAGCTGGTGGTTCATTCACTGTCGCC
AGGGACACTTCTGGTGAGAGCCTTGGTAGGGGTACAAAAATGATCCTGTATCTCAAGGAG
GATCAGCTTGAATATCTCGAAGAGCGCAGGCTCAAGGATCTGATTAAGAAGCACTCAGAG
TTCATCAGTTACCCAATCTCTCTTTGGGTTGAGAAGACCATTGAAAAGGAGATCTCTGAT
GATGAGGATGAAGAGGAGAAGAAAGATGAGGAAGGAAAGGTAGAGGAGGTTGATGAGGAA
AAAGAGAAGGATGAGAAGAAAAAGAAGAAAATTAAGGAAGTAACTAATGAGTGGTCATTG
GTGAACAAACAGAAGCCTATTTGGATGAGGAAGCCAGAGGAGATCTCAAAGGAAGAATAT
GCTGCATTCTACAAGAGTCTGACCAATGACTGGGAGGAACATTTGGCTGTGAAGCACTTC
TCTGTTGAGGGCCAGTTGGAGTTTAAAGCTGTTCTTTTTGTTCCAAAAAGGGCTCCTTTT
GACCTTTTTGACACAAAAAAGAAACAAAACAACATCAAGTTGTATGTTCGTCGTGTGTTC
ATCATGGATAACTGTGAAGAGTTAATTCCTGAATTTCTGAGTTTTGTGAAGGGTATTGTG
GATTCTGAGGACCTTCCTCTTAACATCTCTAGAGAGACGTTACAGCAGAACAAGATCTTG
AAGGTTATTCGCAAGAACTTGGTTAAGAAGTGCATTGAGCTATTCTTTGAAATTGCCGAG
AACAAGGAAGACTATGACAAGTTTTACGAGGCTTTCTCAAAGAATCTCAAGCTTGGTATC
CATGAAGATTCACAGAACAGGACCAAGATTGCTGAGTTGCTGAGGTACCATTCCACGAAG
AGTGGTGATGAAATGACCAGCTTGAAGGACTATGTGACTAGGATGAAGGAAGGCCAGAAT
GATATATTCTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAG
AAGCTGAAGAAGAAGGGCTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTACTGT
ATCGGTCAGCTGAAGGAATTTGAGGGTAAAAAGCTTGTTTCTGCTACCAAGGAAGGTCTC
AAACTCGATGAAAGTGAGGATGAGAAGAAAAAGAAAGAAGAATTGAAGGAGAAGTTTGAG
GGCCTTTGCAAGGTGATCAAGGATGTGCTTGGTGACAAGGTTGAAAAGGTCGTCGTTTCA
GACCGTGTTGTGGACTCTCCCTGCTGTTTGGTTACTGGTGAGTATGGCTGGACTGCCAAC
ATGGAGAGAATCATGAAAGCACAAGCACTCAGGGATTCTAGCATGGCTGGATACATGTCT
AGCAAGAAGACCATGGAGATAAACCCAGAGAATGCCATCATGGATGAGCTCAGGAAGAGG
GCTGATGCAGACAAGAATGACAAGTCCGTCAAGGATTTAGTAATGTTGCTGTTTGAGACT
GCTCTTCTCACCTCAGGTTTCAGCCTCGATGATCCCAACACCTTCGGCAATAGAATTCAC
AGAATGCTGAAACTTGGGCTCAGCATTGACGAGGATGCCAGTGATGTTGATGTCGATATG
CCAGCACTTGAGGATCCTGAAGCAGATGCCGAGGGTAGCAAAATGGAAGAAGTCGATTAA