Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037320
CDS Infomation

pacid=37476677 polypeptide=PGSC0003DMP400025360 locus=PGSC0003DMG400014401 ID=PGSC0003DMT400037320.v4.03 annot-version=v4.03
Sequence

ATGCAACTCCTCATATCGCCGAGTTTGAGGCATGTTACTGTCCTCCCAGCTAAAGGATTC
AAGGAGTTTGTCAAAGTAAAAGTTGGTTCGAGGAGAATATCGTACCTCATGGTCTTCTAT
TCGCTCCTGCTTTTTACGTTTCTTCTCAGGTTTGTCTTCATGTTAACGGCTGAAGACACC
ATAGATGGAGAACGAAAATGTTCAACGCTAGGGTGCTTGGGGAGAAAAATTGGACCAAGG
ATTTTGGGGACACAACTCGAATCAACAGTACCTGAGGTGATTTATCAAGTATTGGAGGAA
CCTACGGACCAGATTGAAATAGAAGAAGGGCCGGAAACTCCTCAATCGTTGGAAGAGTTT
ATGGAAGAAATGAAGGACACAAGGCCAGATGCAGAAACCTTTGCTGTCAAGCTTAAAGCT
ATGGTAACCCTCCTTGAACAAAGAACAAGAACTGCCAAGATCCAAGAATACCTTTATCGG
CATGTAGCATCTAGTGGCATCCCGAAACAGCTGCACTGCCTTGATCTCAAGCTAGCACAT
GAGCATTCCATCAACGCCAATGCCCGTCTCCAGTTACCATCACCGGAACTTGTTCCCGCC
CTTGTTGATAATTCATACTTCCATTTTGTCCTAGCCTCTGACAATATTCTTGCTGCTTCT
GTTGTTGCATCATCGCTTGTCCAGAACTCTTTCCGACCTGAGAAAGTTGTCCTTCACATA
ATCACGGATAGCAAAACCTTCTCACCGATGCAAGCTTGGTTTTCGTTACATTCTTTGACA
CCTGCAATCATTGAGGTTAAAGCGTTGCACCATTTCGATTGGTTAACAAAGGGAAAGGTC
CCAGTTCTGGAAGCAATGGAGAAAGACCAAAAAGCAAGATCACAATTCAGGGGAGGGTCA
TCAGCAATTGTAGCGAATACAACAGAAAAGCCCCATATCATTGCAGCAAAGTTGCAAGCA
CTCAGTCCCAAATACAATTCTCTGATGAACCACATACGGATATACTTGCCAGAGTTGTTT
CCCAGTCTTGATAAGGTAGTCTTCCTGGACGATGACATCGTCATTCAAACCGATCTTTCA
TCTCTATGGGACATTGAAATGAACGGGAAGGTGAATGGAGCGGTAGAGACATGCAGGGGA
GAGGACAAGTTTGTGATGGCGAAGCGCTTTAAAAGCTATTTGAATTTTTCTCATCCTCTC
ATATCGAAGAACTTTGATCCTAATGAATGTGCATGGGCCTATGGCATGAACATTTTTGAT
CTGGAAGCATGGAGAGAAACAAATATAAGTGAGGCATACCACTACTGGCTCGAACAGAAC
TTGAAGTCAGATCTAAGTTTGTGGCAGCTAGGTACATTACCTCCAGGACTAATTGCATTT
CATGGTCATGTCCATGCTATTGATCCCTTTTGGCACATGCTAGGACTCGGGTACCAAGAT
AACACGAGCATCCCGGATGCTAAGAGTGCTGGTGTGATCCACTTCAACGGTCGAGCAAAA
CCTTGGCTAGATATAGCGTTCCCTCAACTTCGATCCCTGTGGACAAAGTACGTTAACTTC
TCCGATAAATTTATCAGAACCTGTCATATTAGAGCAACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025360
PEP Infomation

pacid=37476677 transcript=PGSC0003DMT400037320 locus=PGSC0003DMG400014401 ID=PGSC0003DMT400037320.v4.03 annot-version=v4.03
Sequence

MQLLISPSLRHVTVLPAKGFKEFVKVKVGSRRISYLMVFYSLLLFTFLLRFVFMLTAEDT
IDGERKCSTLGCLGRKIGPRILGTQLESTVPEVIYQVLEEPTDQIEIEEGPETPQSLEEF
MEEMKDTRPDAETFAVKLKAMVTLLEQRTRTAKIQEYLYRHVASSGIPKQLHCLDLKLAH
EHSINANARLQLPSPELVPALVDNSYFHFVLASDNILAASVVASSLVQNSFRPEKVVLHI
ITDSKTFSPMQAWFSLHSLTPAIIEVKALHHFDWLTKGKVPVLEAMEKDQKARSQFRGGS
SAIVANTTEKPHIIAAKLQALSPKYNSLMNHIRIYLPELFPSLDKVVFLDDDIVIQTDLS
SLWDIEMNGKVNGAVETCRGEDKFVMAKRFKSYLNFSHPLISKNFDPNECAWAYGMNIFD
LEAWRETNISEAYHYWLEQNLKSDLSLWQLGTLPPGLIAFHGHVHAIDPFWHMLGLGYQD
NTSIPDAKSAGVIHFNGRAKPWLDIAFPQLRSLWTKYVNFSDKFIRTCHIRAT*

Transcript Sequence

Transcript ID

PGSC0003DMT400037320
Transcript Infomation

pacid=37476677 locus=PGSC0003DMG400014401 ID=PGSC0003DMT400037320.v4.03 annot-version=v4.03
Sequence

ATGCAACTCCTCATATCGCCGAGTTTGAGGCATGTTACTGTCCTCCCAGCTAAAGGATTC
AAGGAGTTTGTCAAAGTAAAAGTTGGTTCGAGGAGAATATCGTACCTCATGGTCTTCTAT
TCGCTCCTGCTTTTTACGTTTCTTCTCAGGTTTGTCTTCATGTTAACGGCTGAAGACACC
ATAGATGGAGAACGAAAATGTTCAACGCTAGGGTGCTTGGGGAGAAAAATTGGACCAAGG
ATTTTGGGGACACAACTCGAATCAACAGTACCTGAGGTGATTTATCAAGTATTGGAGGAA
CCTACGGACCAGATTGAAATAGAAGAAGGGCCGGAAACTCCTCAATCGTTGGAAGAGTTT
ATGGAAGAAATGAAGGACACAAGGCCAGATGCAGAAACCTTTGCTGTCAAGCTTAAAGCT
ATGGTAACCCTCCTTGAACAAAGAACAAGAACTGCCAAGATCCAAGAATACCTTTATCGG
CATGTAGCATCTAGTGGCATCCCGAAACAGCTGCACTGCCTTGATCTCAAGCTAGCACAT
GAGCATTCCATCAACGCCAATGCCCGTCTCCAGTTACCATCACCGGAACTTGTTCCCGCC
CTTGTTGATAATTCATACTTCCATTTTGTCCTAGCCTCTGACAATATTCTTGCTGCTTCT
GTTGTTGCATCATCGCTTGTCCAGAACTCTTTCCGACCTGAGAAAGTTGTCCTTCACATA
ATCACGGATAGCAAAACCTTCTCACCGATGCAAGCTTGGTTTTCGTTACATTCTTTGACA
CCTGCAATCATTGAGGTTAAAGCGTTGCACCATTTCGATTGGTTAACAAAGGGAAAGGTC
CCAGTTCTGGAAGCAATGGAGAAAGACCAAAAAGCAAGATCACAATTCAGGGGAGGGTCA
TCAGCAATTGTAGCGAATACAACAGAAAAGCCCCATATCATTGCAGCAAAGTTGCAAGCA
CTCAGTCCCAAATACAATTCTCTGATGAACCACATACGGATATACTTGCCAGAGTTGTTT
CCCAGTCTTGATAAGGTAGTCTTCCTGGACGATGACATCGTCATTCAAACCGATCTTTCA
TCTCTATGGGACATTGAAATGAACGGGAAGGTGAATGGAGCGGTAGAGACATGCAGGGGA
GAGGACAAGTTTGTGATGGCGAAGCGCTTTAAAAGCTATTTGAATTTTTCTCATCCTCTC
ATATCGAAGAACTTTGATCCTAATGAATGTGCATGGGCCTATGGCATGAACATTTTTGAT
CTGGAAGCATGGAGAGAAACAAATATAAGTGAGGCATACCACTACTGGCTCGAACAGAAC
TTGAAGTCAGATCTAAGTTTGTGGCAGCTAGGTACATTACCTCCAGGACTAATTGCATTT
CATGGTCATGTCCATGCTATTGATCCCTTTTGGCACATGCTAGGACTCGGGTACCAAGAT
AACACGAGCATCCCGGATGCTAAGAGTGCTGGTGTGATCCACTTCAACGGTCGAGCAAAA
CCTTGGCTAGATATAGCGTTCCCTCAACTTCGATCCCTGTGGACAAAGTACGTTAACTTC
TCCGATAAATTTATCAGAACCTGTCATATTAGAGCAACTTGA