Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037264
CDS Infomation

pacid=37479932 polypeptide=PGSC0003DMP400025317 locus=PGSC0003DMG400014376 ID=PGSC0003DMT400037264.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAAATGAAGGTGGGGGGTTGGGGGATGGCCATAGGAATGAAGCTATTCCAGCT
GTTGCGGATGATGGGTTTCTAGTTAAAATAGAAGAAGAAGAAGATGATGATGATTGTGGG
GATCTTTATAACAATATCAATGTTGGAGAGAATTTTCTTCAGTCAGTTCGGAAGAATGAG
GAGGAAGAGAAGGCGGTTGAGCTGCGTCAGGAGACTGGCAATGCTGCTGTGACGGCTGCA
ATTGTAGCGTCTAGGATTTCGAGTGGAGATGATGGGTCTAGGGATATGGCAGTTAGGGGG
AATGAAATGAGAGATAGAGATTTGACACCGGCAGCAAGATTAGAGTCTTCTGTTGCTGGT
GGGATAAAGATTGAGTGTAGTAATCCGTCGGGTAAGATGGCTGATTTAGCGAAGAATGCT
AGCAGTAATATTGTGAATCGAGAGATAATTCAAAGGCCTACTGCTGCTAGTGCTAATGTT
TTAGGAAATGCTAGGAATGTTGGGAATTCAGGGAACGGTAATATGGTTAGACGAGGAATG
GTTAGTGGGAATGCAATGGGTAGTATGGGCAGTTCCAGGGCCTTAGGTGGAGGAGACGGT
AGTGGAGGGACGATTTTATTTGTTGGTAATCTGCATTGGTGGACAACAGATGCTCAAGTG
GAGTTAGAGTTAAGCAGATATGGAGCTGTGGAGGATGTTAAGTTTTTTGATGAAATAGCT
TCTGGGAAGTCGAATGGATATTGTCGGGCTGAGTTTTCTGAACCTGCAGCTGCCATGGCA
TGTAGGGAAGGGATGGATGGACATTATTTCAATGGGCGGGCCTGTGTGGTCAGATTTGCT
TCACCATCTTCGCTAAAGAGCTTGGAAGAGGGACGGATGAATCGAATTAATCTGTATTAT
AGTCTAAGTCAGACCGCTTCAGTGAATCGAATTAATCGGTACAATGCTACTGTTGGTAAT
TTTCAAGATGGTGGGAATTTGGGCAGAGCAGGTCCTCAGATGATGGGGGTTAGGGGTCCA
CTTGGTCCTAAGAGAAATAGGGTTGATGGCGTTGTAGGAAGAGAGCTTATGGGGAATGCT
GGAGGTGGACTCGAACAAGGTATAGGTGCTGCATCTTCATCGAATCATCGTCAAACAATG
ATGGGCCAAGGATTTCATCCTGGTTTTGGAGGGCCTATGGGGAATGCTGGAGGTGGACTC
AGACAAGGTATAGGTGCTGCATCTTCATTGATTCATCCTCAAACAATGATGGGTCAAGGC
CTTTATTCTGCTTTCAGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTCTCTGGT
GGTCTAACTCTACCTTTTTCAGGTAGGTTGACTCCATTTCCACCTGCACATTTTAGGAGA
GGAATGCCCATGAATAGTATAGGAATGATGCCTCGTGCTGGTATGGAGGGACCTAATATG
GGCAGATGGACTGGAGATGAGCATGGCTACAGGGCAGGAGAGTCAAGTAATGTGGCAGAA
TCTGATTATCAGTATGGAGAAGAAAGCCGTGATAGGGGCACTTGGCCTAGTAACAGAGAA
AATGATAGGCCTGATTCTTCAGACAGAAGATATATAGACGACAGAGAACCTTCAGGGCGT
GATCATGATTGGCAAGAAAGGAGACGCCAAGATGATAGAGATGTTGAAAGCTCTAGAGGT
CGTGACCATGACCCTGCGAGGCATCAAGATAGGGAACACAAGCGTGGTCATCATAGGGAT
GATAATGCTGATCGTCATAGGCACAGGGACGAGAGAAAGAACATGATGATGAACAGGACA
GAGGAAGATCATCAAGTACACAGACCAAATCACAGTCAAAATCAAAGGGGAAGGCCCCCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400025317
PEP Infomation

pacid=37479932 transcript=PGSC0003DMT400037264 locus=PGSC0003DMG400014376 ID=PGSC0003DMT400037264.v4.03 annot-version=v4.03
Sequence

MEENEGGGLGDGHRNEAIPAVADDGFLVKIEEEEDDDDCGDLYNNINVGENFLQSVRKNE
EEEKAVELRQETGNAAVTAAIVASRISSGDDGSRDMAVRGNEMRDRDLTPAARLESSVAG
GIKIECSNPSGKMADLAKNASSNIVNREIIQRPTAASANVLGNARNVGNSGNGNMVRRGM
VSGNAMGSMGSSRALGGGDGSGGTILFVGNLHWWTTDAQVELELSRYGAVEDVKFFDEIA
SGKSNGYCRAEFSEPAAAMACREGMDGHYFNGRACVVRFASPSSLKSLEEGRMNRINLYY
SLSQTASVNRINRYNATVGNFQDGGNLGRAGPQMMGVRGPLGPKRNRVDGVVGRELMGNA
GGGLEQGIGAASSSNHRQTMMGQGFHPGFGGPMGNAGGGLRQGIGAASSLIHPQTMMGQG
LYSAFRGPMGRMGGYGGFSGGLTLPFSGRLTPFPPAHFRRGMPMNSIGMMPRAGMEGPNM
GRWTGDEHGYRAGESSNVAESDYQYGEESRDRGTWPSNRENDRPDSSDRRYIDDREPSGR
DHDWQERRRQDDRDVESSRGRDHDPARHQDREHKRGHHRDDNADRHRHRDERKNMMMNRT
EEDHQVHRPNHSQNQRGRPP*

Transcript Sequence

Transcript ID

PGSC0003DMT400037264
Transcript Infomation

pacid=37479932 locus=PGSC0003DMG400014376 ID=PGSC0003DMT400037264.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAAATGAAGGTGGGGGGTTGGGGGATGGCCATAGGAATGAAGCTATTCCAGCT
GTTGCGGATGATGGGTTTCTAGTTAAAATAGAAGAAGAAGAAGATGATGATGATTGTGGG
GATCTTTATAACAATATCAATGTTGGAGAGAATTTTCTTCAGTCAGTTCGGAAGAATGAG
GAGGAAGAGAAGGCGGTTGAGCTGCGTCAGGAGACTGGCAATGCTGCTGTGACGGCTGCA
ATTGTAGCGTCTAGGATTTCGAGTGGAGATGATGGGTCTAGGGATATGGCAGTTAGGGGG
AATGAAATGAGAGATAGAGATTTGACACCGGCAGCAAGATTAGAGTCTTCTGTTGCTGGT
GGGATAAAGATTGAGTGTAGTAATCCGTCGGGTAAGATGGCTGATTTAGCGAAGAATGCT
AGCAGTAATATTGTGAATCGAGAGATAATTCAAAGGCCTACTGCTGCTAGTGCTAATGTT
TTAGGAAATGCTAGGAATGTTGGGAATTCAGGGAACGGTAATATGGTTAGACGAGGAATG
GTTAGTGGGAATGCAATGGGTAGTATGGGCAGTTCCAGGGCCTTAGGTGGAGGAGACGGT
AGTGGAGGGACGATTTTATTTGTTGGTAATCTGCATTGGTGGACAACAGATGCTCAAGTG
GAGTTAGAGTTAAGCAGATATGGAGCTGTGGAGGATGTTAAGTTTTTTGATGAAATAGCT
TCTGGGAAGTCGAATGGATATTGTCGGGCTGAGTTTTCTGAACCTGCAGCTGCCATGGCA
TGTAGGGAAGGGATGGATGGACATTATTTCAATGGGCGGGCCTGTGTGGTCAGATTTGCT
TCACCATCTTCGCTAAAGAGCTTGGAAGAGGGACGGATGAATCGAATTAATCTGTATTAT
AGTCTAAGTCAGACCGCTTCAGTGAATCGAATTAATCGGTACAATGCTACTGTTGGTAAT
TTTCAAGATGGTGGGAATTTGGGCAGAGCAGGTCCTCAGATGATGGGGGTTAGGGGTCCA
CTTGGTCCTAAGAGAAATAGGGTTGATGGCGTTGTAGGAAGAGAGCTTATGGGGAATGCT
GGAGGTGGACTCGAACAAGGTATAGGTGCTGCATCTTCATCGAATCATCGTCAAACAATG
ATGGGCCAAGGATTTCATCCTGGTTTTGGAGGGCCTATGGGGAATGCTGGAGGTGGACTC
AGACAAGGTATAGGTGCTGCATCTTCATTGATTCATCCTCAAACAATGATGGGTCAAGGC
CTTTATTCTGCTTTCAGAGGGCCTATGGGGAGAATGGGTGGTTATGGAGGATTCTCTGGT
GGTCTAACTCTACCTTTTTCAGGTAGGTTGACTCCATTTCCACCTGCACATTTTAGGAGA
GGAATGCCCATGAATAGTATAGGAATGATGCCTCGTGCTGGTATGGAGGGACCTAATATG
GGCAGATGGACTGGAGATGAGCATGGCTACAGGGCAGGAGAGTCAAGTAATGTGGCAGAA
TCTGATTATCAGTATGGAGAAGAAAGCCGTGATAGGGGCACTTGGCCTAGTAACAGAGAA
AATGATAGGCCTGATTCTTCAGACAGAAGATATATAGACGACAGAGAACCTTCAGGGCGT
GATCATGATTGGCAAGAAAGGAGACGCCAAGATGATAGAGATGTTGAAAGCTCTAGAGGT
CGTGACCATGACCCTGCGAGGCATCAAGATAGGGAACACAAGCGTGGTCATCATAGGGAT
GATAATGCTGATCGTCATAGGCACAGGGACGAGAGAAAGAACATGATGATGAACAGGACA
GAGGAAGATCATCAAGTACACAGACCAAATCACAGTCAAAATCAAAGGGGAAGGCCCCCA
TGA