Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037207
CDS Infomation

pacid=37462475 polypeptide=PGSC0003DMP400025273 locus=PGSC0003DMG400014345 ID=PGSC0003DMT400037207.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTATGACGCTCACTGGATTATTGAAACATGTTGCTGAAAAATTTCCTTCTCAC
TGTGCGATTTCCATTTCCGGCAAGTTTCATATCACTCATGCACGGCTTCACGAACTTGTT
GAACGTGCCGCTTCTCAACTTGTATCTGCCGGTGTTAAGCATGGCGATGTCATCGCTCTC
ACCTTCCCCAACACAATCGAGTTCGTGATCATGTTTCTAGCTGTAATTCGAGTTAGAGCC
ACGGCGGCGCCACTGAATTCAGCGTATATGGCAGAAGAATTTGAGTTTTATTTATCTGAT
TCAGAATCGAAACTCTTAATAACTGCAAAAGAAGGAAATGAAGCGGCTCAAGCCGCCGCC
TCCAAGCTCAAAATCCCTCATATTACTGTAACCCTGCCGGAAGCCGATTCTGATATTGCT
TTCTCCCCGGCTCCTCCCCAATCGAACCTTCAATCGGCGTCAGAAATCGTAAACGACCCA
TCGGATATTGGACTTTTCCTTCATACATCAGGCACCACGAGCCGGCCAAAAGGTGTTCCT
CTGTCTCAGCTTAATTTGGTATCTTCAGTGAACAACATCAAATCTGTGTACAAACTCTGT
CACTCCGATTCGACCGTGATCGTGTTGCCGTTGTTTCATGTTCACGGGTTAATGGCCGGG
TTACTGAGTTCACTCGGAGCCGGAGCATCCGTGACACTTCCATCTGCTGGTAGATTTTCC
GGTACAACTTTTTGGTCAGACATGAAAAAATACAACGCAACATGGTACACAGCTGTGCCT
ACAATTCACCAAATTCTGTTGGATCGTCACCTCAGCAAACCCGAATCTGAATACCCGAAG
CTCCGATTCATTCGGAGCTGCAGTGCAGCACTGGCTCCATCAGTGATGGCCCGGTTAGAA
GAAGCATTTGGGGCTCCTGTTTTGGAGGCATATGCAATGACAGAGGCAACCCATTTGATG
GCTTCGAACCCGTTACCCGAGGATGGACCACATATTCCCGGGTCGGTTGGGAAACCTGTG
GGTCAAGAGATGGCGATATTGAATGAGAATGGTGTTGTACAAGGGCCTAATGCTAAGGGG
GAAGTTTGTATTCGGGGTCCAAATGTGACGAAAGGGTACAAGAACAATCCAGAGGCTAAT
AAATCAGCTTTCCAGTTTGGTTGGTTTCATACCGGAGATGTGGGTTATTTGGACTCTGAT
GGATACTTGCATTTGGTTGGCAGAATCAAGGAGTTGATCAACCGTGGAGGAGAGAAAATA
TCACCTATTGAAGTGGATGCAGTCCTAGTTTCTCATCCGGAAATTGCTCAGGCTGTTGCT
TTTGGAGTTCCTGACGACAAGTATGGTGAAGAGATAAATTGTGCAGTTATTCCAAGAGAA
GGGTCAAACATTGATGAAGCAGAGGTTATGAGATTTTGCAAGAAGAATCTGGCAGCCTTT
AAGGTCCCAAAGAAGGTTTTCATGACTGATTCTCTTCCACAGACTGCATCAGGGAAAATT
CAACGACGACTTGTTGCAGAGCACTTCCTTGCACAGATTTCAACTGCTAAAGTCCCCAAG
TTTGGAGCGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025273
PEP Infomation

pacid=37462475 transcript=PGSC0003DMT400037207 locus=PGSC0003DMG400014345 ID=PGSC0003DMT400037207.v4.03 annot-version=v4.03
Sequence

MESMTLTGLLKHVAEKFPSHCAISISGKFHITHARLHELVERAASQLVSAGVKHGDVIAL
TFPNTIEFVIMFLAVIRVRATAAPLNSAYMAEEFEFYLSDSESKLLITAKEGNEAAQAAA
SKLKIPHITVTLPEADSDIAFSPAPPQSNLQSASEIVNDPSDIGLFLHTSGTTSRPKGVP
LSQLNLVSSVNNIKSVYKLCHSDSTVIVLPLFHVHGLMAGLLSSLGAGASVTLPSAGRFS
GTTFWSDMKKYNATWYTAVPTIHQILLDRHLSKPESEYPKLRFIRSCSAALAPSVMARLE
EAFGAPVLEAYAMTEATHLMASNPLPEDGPHIPGSVGKPVGQEMAILNENGVVQGPNAKG
EVCIRGPNVTKGYKNNPEANKSAFQFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGEKI
SPIEVDAVLVSHPEIAQAVAFGVPDDKYGEEINCAVIPREGSNIDEAEVMRFCKKNLAAF
KVPKKVFMTDSLPQTASGKIQRRLVAEHFLAQISTAKVPKFGA*

Transcript Sequence

Transcript ID

PGSC0003DMT400037207
Transcript Infomation

pacid=37462475 locus=PGSC0003DMG400014345 ID=PGSC0003DMT400037207.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTATGACGCTCACTGGATTATTGAAACATGTTGCTGAAAAATTTCCTTCTCAC
TGTGCGATTTCCATTTCCGGCAAGTTTCATATCACTCATGCACGGCTTCACGAACTTGTT
GAACGTGCCGCTTCTCAACTTGTATCTGCCGGTGTTAAGCATGGCGATGTCATCGCTCTC
ACCTTCCCCAACACAATCGAGTTCGTGATCATGTTTCTAGCTGTAATTCGAGTTAGAGCC
ACGGCGGCGCCACTGAATTCAGCGTATATGGCAGAAGAATTTGAGTTTTATTTATCTGAT
TCAGAATCGAAACTCTTAATAACTGCAAAAGAAGGAAATGAAGCGGCTCAAGCCGCCGCC
TCCAAGCTCAAAATCCCTCATATTACTGTAACCCTGCCGGAAGCCGATTCTGATATTGCT
TTCTCCCCGGCTCCTCCCCAATCGAACCTTCAATCGGCGTCAGAAATCGTAAACGACCCA
TCGGATATTGGACTTTTCCTTCATACATCAGGCACCACGAGCCGGCCAAAAGGTGTTCCT
CTGTCTCAGCTTAATTTGGTATCTTCAGTGAACAACATCAAATCTGTGTACAAACTCTGT
CACTCCGATTCGACCGTGATCGTGTTGCCGTTGTTTCATGTTCACGGGTTAATGGCCGGG
TTACTGAGTTCACTCGGAGCCGGAGCATCCGTGACACTTCCATCTGCTGGTAGATTTTCC
GGTACAACTTTTTGGTCAGACATGAAAAAATACAACGCAACATGGTACACAGCTGTGCCT
ACAATTCACCAAATTCTGTTGGATCGTCACCTCAGCAAACCCGAATCTGAATACCCGAAG
CTCCGATTCATTCGGAGCTGCAGTGCAGCACTGGCTCCATCAGTGATGGCCCGGTTAGAA
GAAGCATTTGGGGCTCCTGTTTTGGAGGCATATGCAATGACAGAGGCAACCCATTTGATG
GCTTCGAACCCGTTACCCGAGGATGGACCACATATTCCCGGGTCGGTTGGGAAACCTGTG
GGTCAAGAGATGGCGATATTGAATGAGAATGGTGTTGTACAAGGGCCTAATGCTAAGGGG
GAAGTTTGTATTCGGGGTCCAAATGTGACGAAAGGGTACAAGAACAATCCAGAGGCTAAT
AAATCAGCTTTCCAGTTTGGTTGGTTTCATACCGGAGATGTGGGTTATTTGGACTCTGAT
GGATACTTGCATTTGGTTGGCAGAATCAAGGAGTTGATCAACCGTGGAGGAGAGAAAATA
TCACCTATTGAAGTGGATGCAGTCCTAGTTTCTCATCCGGAAATTGCTCAGGCTGTTGCT
TTTGGAGTTCCTGACGACAAGTATGGTGAAGAGATAAATTGTGCAGTTATTCCAAGAGAA
GGGTCAAACATTGATGAAGCAGAGGTTATGAGATTTTGCAAGAAGAATCTGGCAGCCTTT
AAGGTCCCAAAGAAGGTTTTCATGACTGATTCTCTTCCACAGACTGCATCAGGGAAAATT
CAACGACGACTTGTTGCAGAGCACTTCCTTGCACAGATTTCAACTGCTAAAGTCCCCAAG
TTTGGAGCGTAG