Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037157
CDS Infomation

pacid=37462888 polypeptide=PGSC0003DMP400025237 locus=PGSC0003DMG400014327 ID=PGSC0003DMT400037157.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAAAAGGGGTTTGCCCAATTGGGTTCCTAATGGGTGGAAGGTGGAGGTTAGA
ACACGCAAGAAAGGAAAGAAAGAAAAGTGGTATATTGATCCCTCAAAAGGACTCAAATTC
TGCTCCAAGGCGGACGTTCTTCACTATCTTAGCAGTGTTGACAGTAATTGTTCTAAGAGT
TCTAATACAAAAGAAATGGAGAAGAAAGGCACCGAAAAGTGTTTTACTGAGAAGACTGCA
TCAGAAGGGTTGCCACCAGGATGGATTAAGGAATTGAAGGTCAGGAGAAAGGGGCGCAAG
ATCAGGAAAGATCCGTATTATATTGATCCTGTCAGTGGACAAACTTTCCGCTCTATGAAG
CAAGTTTCTCGGTTCCTTGAAACTAGAGAGCCGGGAAGGTTTGAATCCACGCCCGATAAT
CGATGTCCTGATACAGTAAAACTGGAAGAACCTTCTTCTTCTTTTCCTGCTGAAGCTGAC
AAGCAGATGTCGCTAGACAGTGATGCATCTGGCAAGGAAGTTAATTCGAATCAGAAGCTG
AAGTTGGGTGCTGAACATATGACACATTCCAGTTGCGTAGAAGGCGGTATGTCATCCTGT
GAAGGTTTAGGAGATGCTGTAGCAGGGGAGAATGTTGGGAAAGTTGTTTCAGATCCTGCA
AGTGAAGAACGTCAAGAAAAGGACGATGATGGTGAAGTTGTCTCGAATACTGCTAGTGGA
GAACATCAAGAAAAGGAGGATGATGATAAAGCTATTTCAGATCCTGCAAGTAGAGAACAT
CAAGGAAAGGAAGAGGATGGTAAAGTTGTCTCGGCTACTGCAAGTGGAGAACATCAAGAA
AATGAGGATGATGGTAAAGTTGTCTCGGAAACTGTAAGTGGAGAAGATCAAGAAAAGCCA
TCACGAGATGGAGCGGAAAAGCATGACCAGAAAACATTTCAGCGGAAAAGAAAAAAGGGT
ATGAACTTGCCTCGCAGAGCATCCAAACGGCTTGCTGGTATTAAAGCTGATACATCTCTT
AAGCTCCAAACAAATGATCAAACCCAGCTAACTTCAGTTAGACAGCAGGAGAGGACACAA
GCTGCCACCTCTGATAACCCTTTGAATTTTATTAATACCAGTAAGCATGTTGCAACTACA
GTAACTGGTATTACCATCAGCAAGAAGGTAGAAACTGGGAGTCTGACTATTAAAAGGAAA
AAGCGTCTTGTTGCTTCATCACAAACGGAGCGAGAGAAGAAGCCTTCTCCAGCTGAGCCT
GCAAAAACTGTCCTTGCTAGCTGTGAAGGCGATAAGAAAGGTGAAACAGCTCTCGAGTCA
TCTTTAAGTGATCTTTGGACAGACCCCTGCATAGAATTTGCAATAAAAACTCTAACCGGC
ACAATTCCAGTCATAAACGAAAAGAAAGTGGATGAGATCCCGGGTTCTAATTCGAGCAAG
CCCTCTGTTAATACTCCTTCCTCTGTGGGCTTACCTTCTGATGAAATATGGGCAGATCCT
TGTTTCATGTTTGCTGTCAAGACTCTTACTGGTGAAATACCGATAGGGGACGACTTATGC
TCTCAGAAGATAGTCCAGCAGCAATGCACTTCATCACAATTCCAAGGAAATAATGGTTTA
GTATTACCAAACATCAGATTTGAAGAGTTTGGCCAGGCTAATCTTCCGCGCTATGCAGCA
CCAGAAATGTCTTCATACAAGCAACAGCCTGCAGTAACCCCTAATGCATACCAGAATCGT
TGGTTCGCTAAATTTGGTTCTCATCGGCCTTCACCACTTTGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025237
PEP Infomation

pacid=37462888 transcript=PGSC0003DMT400037157 locus=PGSC0003DMG400014327 ID=PGSC0003DMT400037157.v4.03 annot-version=v4.03
Sequence

MGKKRGLPNWVPNGWKVEVRTRKKGKKEKWYIDPSKGLKFCSKADVLHYLSSVDSNCSKS
SNTKEMEKKGTEKCFTEKTASEGLPPGWIKELKVRRKGRKIRKDPYYIDPVSGQTFRSMK
QVSRFLETREPGRFESTPDNRCPDTVKLEEPSSSFPAEADKQMSLDSDASGKEVNSNQKL
KLGAEHMTHSSCVEGGMSSCEGLGDAVAGENVGKVVSDPASEERQEKDDDGEVVSNTASG
EHQEKEDDDKAISDPASREHQGKEEDGKVVSATASGEHQENEDDGKVVSETVSGEDQEKP
SRDGAEKHDQKTFQRKRKKGMNLPRRASKRLAGIKADTSLKLQTNDQTQLTSVRQQERTQ
AATSDNPLNFINTSKHVATTVTGITISKKVETGSLTIKRKKRLVASSQTEREKKPSPAEP
AKTVLASCEGDKKGETALESSLSDLWTDPCIEFAIKTLTGTIPVINEKKVDEIPGSNSSK
PSVNTPSSVGLPSDEIWADPCFMFAVKTLTGEIPIGDDLCSQKIVQQQCTSSQFQGNNGL
VLPNIRFEEFGQANLPRYAAPEMSSYKQQPAVTPNAYQNRWFAKFGSHRPSPLC*

Transcript Sequence

Transcript ID

PGSC0003DMT400037157
Transcript Infomation

pacid=37462888 locus=PGSC0003DMG400014327 ID=PGSC0003DMT400037157.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAAAAGGGGTTTGCCCAATTGGGTTCCTAATGGGTGGAAGGTGGAGGTTAGA
ACACGCAAGAAAGGAAAGAAAGAAAAGTGGTATATTGATCCCTCAAAAGGACTCAAATTC
TGCTCCAAGGCGGACGTTCTTCACTATCTTAGCAGTGTTGACAGTAATTGTTCTAAGAGT
TCTAATACAAAAGAAATGGAGAAGAAAGGCACCGAAAAGTGTTTTACTGAGAAGACTGCA
TCAGAAGGGTTGCCACCAGGATGGATTAAGGAATTGAAGGTCAGGAGAAAGGGGCGCAAG
ATCAGGAAAGATCCGTATTATATTGATCCTGTCAGTGGACAAACTTTCCGCTCTATGAAG
CAAGTTTCTCGGTTCCTTGAAACTAGAGAGCCGGGAAGGTTTGAATCCACGCCCGATAAT
CGATGTCCTGATACAGTAAAACTGGAAGAACCTTCTTCTTCTTTTCCTGCTGAAGCTGAC
AAGCAGATGTCGCTAGACAGTGATGCATCTGGCAAGGAAGTTAATTCGAATCAGAAGCTG
AAGTTGGGTGCTGAACATATGACACATTCCAGTTGCGTAGAAGGCGGTATGTCATCCTGT
GAAGGTTTAGGAGATGCTGTAGCAGGGGAGAATGTTGGGAAAGTTGTTTCAGATCCTGCA
AGTGAAGAACGTCAAGAAAAGGACGATGATGGTGAAGTTGTCTCGAATACTGCTAGTGGA
GAACATCAAGAAAAGGAGGATGATGATAAAGCTATTTCAGATCCTGCAAGTAGAGAACAT
CAAGGAAAGGAAGAGGATGGTAAAGTTGTCTCGGCTACTGCAAGTGGAGAACATCAAGAA
AATGAGGATGATGGTAAAGTTGTCTCGGAAACTGTAAGTGGAGAAGATCAAGAAAAGCCA
TCACGAGATGGAGCGGAAAAGCATGACCAGAAAACATTTCAGCGGAAAAGAAAAAAGGGT
ATGAACTTGCCTCGCAGAGCATCCAAACGGCTTGCTGGTATTAAAGCTGATACATCTCTT
AAGCTCCAAACAAATGATCAAACCCAGCTAACTTCAGTTAGACAGCAGGAGAGGACACAA
GCTGCCACCTCTGATAACCCTTTGAATTTTATTAATACCAGTAAGCATGTTGCAACTACA
GTAACTGGTATTACCATCAGCAAGAAGGTAGAAACTGGGAGTCTGACTATTAAAAGGAAA
AAGCGTCTTGTTGCTTCATCACAAACGGAGCGAGAGAAGAAGCCTTCTCCAGCTGAGCCT
GCAAAAACTGTCCTTGCTAGCTGTGAAGGCGATAAGAAAGGTGAAACAGCTCTCGAGTCA
TCTTTAAGTGATCTTTGGACAGACCCCTGCATAGAATTTGCAATAAAAACTCTAACCGGC
ACAATTCCAGTCATAAACGAAAAGAAAGTGGATGAGATCCCGGGTTCTAATTCGAGCAAG
CCCTCTGTTAATACTCCTTCCTCTGTGGGCTTACCTTCTGATGAAATATGGGCAGATCCT
TGTTTCATGTTTGCTGTCAAGACTCTTACTGGTGAAATACCGATAGGGGACGACTTATGC
TCTCAGAAGATAGTCCAGCAGCAATGCACTTCATCACAATTCCAAGGAAATAATGGTTTA
GTATTACCAAACATCAGATTTGAAGAGTTTGGCCAGGCTAATCTTCCGCGCTATGCAGCA
CCAGAAATGTCTTCATACAAGCAACAGCCTGCAGTAACCCCTAATGCATACCAGAATCGT
TGGTTCGCTAAATTTGGTTCTCATCGGCCTTCACCACTTTGTTGA